RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ACTL10Q5JWF8 245 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 SPSB4Q96A44 273 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 NEU1Q99519 415 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 SAMD10Q9BYL1 202 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 WNT10AQ9GZT5 417 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 LIN7CQ9NUP9 197 aaKnown RBP10.85□□□□□ -0.67
SNX1-201ENST00000261889 CTXND1A0A1B0GTU2 59 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 AHRRA9YTQ3 701 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 CDX4O14627 284 aaPredicted RBP10.85□□□□□ -0.67
SNX1-201ENST00000261889 HPRT1P00492 218 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 MPV17P39210 176 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 ZNF90Q03938 601 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 DOLPP1Q86YN1 238 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 GBGT1Q8N5D6 347 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 OCC1Q8TAD7 63 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 ACTR3CQ9C0K3 210 aaPredicted RBP10.85□□□□□ -0.67
SNX1-201ENST00000261889 LRP5LA4QPB2 252 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 COX5AP20674 150 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 COLCA1Q6ZS62 124 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 BAGE3Q86Y29 109 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 BAGE2Q86Y30 109 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 ZNF573Q86YE8 665 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 CT55Q8WUE5 264 aa10.85□□□□□ -0.67
SNX1-201ENST00000261889 TIMM8BQ9Y5J9 83 aaPredicted RBP10.85□□□□□ -0.67
SNX1-201ENST00000261889 WNK2Q9Y3S1 2297 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 LOC102723996A0A087X1L8 192 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 LRRC30A6NM36 301 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 SYNGR4O95473 234 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 OR10J4P0C629 311 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 RAC2P15153 192 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 GFRA1P56159 465 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 SERF2P84101 59 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 OR13A1Q8NGR1 328 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 BTF3L4Q96K17 158 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 SEPSECSQ9HD40 501 aaKnown RBP10.84□□□□□ -0.67
SNX1-201ENST00000261889 HEYLQ9NQ87 328 aaPredicted RBP10.84□□□□□ -0.67
SNX1-201ENST00000261889 ACACAQ13085 2346 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 CTXN2P0C2S0 81 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 TNFSF10P50591 281 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 KRTCAP3Q53RY4 240 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 MRPL54Q6P161 138 aaKnown RBP10.84□□□□□ -0.67
SNX1-201ENST00000261889 CMTM2Q8TAZ6 248 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 GCM1Q9NP62 436 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 TP53TG3Q9ULZ0 132 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 TP53TG5Q9Y2B4 290 aa10.84□□□□□ -0.67
SNX1-201ENST00000261889 TET2Q6N021 2002 aaPredicted RBP10.84□□□□□ -0.67
SNX1-201ENST00000261889 NTF3P20783 257 aa10.83□□□□□ -0.67
SNX1-201ENST00000261889 LHX2P50458 406 aa10.83□□□□□ -0.67
SNX1-201ENST00000261889 MLANAQ16655 118 aa10.83□□□□□ -0.67
SNX1-201ENST00000261889 IQCJQ1A5X6 159 aa10.83□□□□□ -0.67
SNX1-201ENST00000261889 KRTAP27-1Q3LI81 207 aa10.83□□□□□ -0.67
SNX1-201ENST00000261889 TMEM14EPQ6UXP3 125 aa10.83□□□□□ -0.67
SNX1-201ENST00000261889 SLC25A40Q8TBP6 338 aa10.83□□□□□ -0.67
SNX1-201ENST00000261889 NINJ1Q92982 152 aa10.83□□□□□ -0.67
SNX1-201ENST00000261889 RNASE7Q9H1E1 156 aaKnown RBP10.83□□□□□ -0.67
SNX1-201ENST00000261889 YTHDF2Q9Y5A9 579 aaKnown RBP10.83□□□□□ -0.67
SNX1-201ENST00000261889 ABCA4P78363 2273 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 LNP1A1A4G5 178 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 F6UZH7 168 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 MKRN2OSH3BPM6 223 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 KITLGP21583 273 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 TIMP3P35625 211 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 CARFQ8N187 725 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 CNEP1R1Q8N9A8 125 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 FAM216AQ8WUB2 273 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 CTDSP1Q9GZU7 261 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
SNX1-201ENST00000261889 NEURL1O76050 574 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 CER1O95813 267 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 HAND1O96004 215 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 CLDN18P56856 261 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 PSG7Q13046 419 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 TRA2AQ13595 282 aaKnown RBP eCLIP10.83□□□□□ -0.683e-6■■□□□ 12.9
SNX1-201ENST00000261889 TMEM251Q8N6I4 163 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 OR2M7Q8NG81 312 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 PSMG3Q9BT73 122 aaPredicted RBP10.83□□□□□ -0.68
SNX1-201ENST00000261889 TMEM208Q9BTX3 173 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 DUSP23Q9BVJ7 150 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 TMEM147Q9BVK8 224 aa10.83□□□□□ -0.68
SNX1-201ENST00000261889 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 M0R143 59 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 MBP02144 154 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 WNT2P09544 360 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 CD24P25063 80 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 FKBP2P26885 142 aaKnown RBP10.82□□□□□ -0.68
SNX1-201ENST00000261889 LINC00310P59036 64 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 VHLLQ6RSH7 139 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 OR8I2Q8N0Y5 310 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 SNIP1Q8TAD8 396 aaKnown RBP10.82□□□□□ -0.68
SNX1-201ENST00000261889 SSBP3Q9BWW4 388 aaPredicted RBP10.82□□□□□ -0.68
SNX1-201ENST00000261889 ARRDC1-AS1Q9H2J1 176 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 SERTAD4Q9NUC0 356 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 TMEM242Q9NWH2 141 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 PCSK5Q92824 1860 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 MDFIC2A0A1B0GVS7 189 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 FCN1O00602 326 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 TDGF1P3P51864 188 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 OR1C1Q15619 314 aa10.82□□□□□ -0.68
SNX1-201ENST00000261889 LCN12Q6JVE5 192 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms