RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SRSF1Q07955 248 aaKnown RBP eCLIP18.22■□□□□ 0.51
SIX3-201ENST00000260653 CLINT1Q14677 625 aa18.22■□□□□ 0.51
SIX3-201ENST00000260653 SLC25A32Q9H2D1 315 aa18.22■□□□□ 0.51
SIX3-201ENST00000260653 NDUFS6O75380 124 aaKnown RBP18.22■□□□□ 0.51
SIX3-201ENST00000260653 IGKV1-16P04430 117 aa18.22■□□□□ 0.51
SIX3-201ENST00000260653 TMEM267Q0VDI3 215 aaPredicted RBP18.22■□□□□ 0.51
SIX3-201ENST00000260653 UBAC2Q8NBM4 344 aa18.22■□□□□ 0.51
SIX3-201ENST00000260653 SSBP3Q9BWW4 388 aaPredicted RBP18.22■□□□□ 0.51
SIX3-201ENST00000260653 TMEM140Q9NV12 185 aa18.22■□□□□ 0.51
SIX3-201ENST00000260653 PSENENQ9NZ42 101 aa18.22■□□□□ 0.51
SIX3-201ENST00000260653 A0A1W2PPH5 198 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 TXNL1O43396 289 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 GOSR1O95249 250 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 EIF5AP63241 154 aaKnown RBP18.21■□□□□ 0.51
SIX3-201ENST00000260653 TLE4Q04727 773 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 PDZD9Q8IXQ8 264 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 ZNF525Q8N782 197 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 LY6G5BQ8NDX9 201 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 OR5C1Q8NGR4 320 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 QTRT1Q9BXR0 403 aaKnown RBP18.21■□□□□ 0.51
SIX3-201ENST00000260653 SLC35D1Q9NTN3 355 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 LEUTXA8MZ59 168 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 ZDHHC16Q969W1 377 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 RHOVQ96L33 236 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 ONECUT1Q9UBC0 465 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 AUP1Q9Y679 476 aa18.21■□□□□ 0.51
SIX3-201ENST00000260653 IGHV2-26A0A0B4J1V2 119 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 TRAV3A0A0B4J244 114 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 DYNLT3P51808 116 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 SPINK9Q5DT21 86 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 COMMD7Q86VX2 200 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 ST6GALNAC6Q969X2 333 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 SMIM8Q96KF7 97 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 CHD6Q8TD26 2715 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 FBXO24O75426 580 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 LIPFP07098 398 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 BAXQ07812 192 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 C16orf54Q6UWD8 224 aa18.2■□□□□ 0.5
SIX3-201ENST00000260653 ZNF98A6NK75 572 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 TEX46H3BTG2 121 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 RTL8BQ17RB0 113 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 STX12Q86Y82 276 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 IGFBPL1Q8WX77 278 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 TMEM186Q96B77 213 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 BORCS7-ASMTA0A0B4J1R7 106 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 RBP4P02753 201 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 RRASP10301 218 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 SPANXN5Q5MJ07 72 aa18.19■□□□□ 0.5
SIX3-201ENST00000260653 TET2Q6N021 2002 aaPredicted RBP18.19■□□□□ 0.5
SIX3-201ENST00000260653 FAM90A9PA6NNJ1 464 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 MED6O75586 246 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 SULT1A1P50225 295 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 ZNF137PP52743 207 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 TAS2R30P59541 319 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 RELBQ01201 579 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 OR13D1Q8NGV5 346 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 OR4A16Q8NH70 328 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 ARV1Q9H2C2 271 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 H0YJW9 148 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 IGHV4-39P01824 125 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 METTL15P1P0C7V9 234 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 OR4A47Q6IF82 309 aa18.18■□□□□ 0.5
SIX3-201ENST00000260653 WNK2Q9Y3S1 2297 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 LOC105371242A0A075B767 164 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 COX7A1P24310 79 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 AARDQ4LEZ3 155 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 FAM71F2Q6NXP2 309 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 DTD1Q8TEA8 209 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 CCL19Q99731 98 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 TNCP24821 2201 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 IGLV1-47P01700 117 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 Q8N7P7 452 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 HSD17B11Q8NBQ5 300 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 OR5AN1Q8NGI8 311 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 NABP2Q9BQ15 211 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 CLEC7AQ9BXN2 247 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 BPESC1Q9GZL8 116 aa18.17■□□□□ 0.5
SIX3-201ENST00000260653 SRRM4A7MD48 611 aaKnown RBP18.16■□□□□ 0.5
SIX3-201ENST00000260653 H7C2Y5 167 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 IFNA17P01571 189 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 APOA2P02652 100 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 FAM157CP0CG43 387 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 ARF6P62330 175 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 DHRS7BQ6IAN0 325 aaPredicted RBP18.16■□□□□ 0.5
SIX3-201ENST00000260653 PLA2G2EQ9NZK7 142 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 CEBPZOSA8MTT3 80 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 HRASP01112 189 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 HLA-DRB5Q30154 266 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 GINS3Q9BRX5 216 aa18.16■□□□□ 0.5
SIX3-201ENST00000260653 BARX1Q9HBU1 254 aaPredicted RBP18.16■□□□□ 0.5
SIX3-201ENST00000260653 hCG_1809904A0A1W2PP81 198 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 A0A1W2PPE2 198 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 A0A1W2PR64 198 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 A0A1W2PRV1 198 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 ARL16Q0P5N6 197 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 ZNF266Q14584 549 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 POU2AF1Q16633 256 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 EIF5AL1Q6IS14 154 aaKnown RBP18.15■□□□□ 0.5
SIX3-201ENST00000260653 HAPLN4Q86UW8 402 aa18.15■□□□□ 0.5
SIX3-201ENST00000260653 TGIF2LXQ8IUE1 241 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms