RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 FAM90A9PA6NNJ1 464 aa12.65□□□□□ -0.39
DDX56-201ENST00000258772 PRR33A8MZF0 331 aa12.65□□□□□ -0.39
DDX56-201ENST00000258772 LY86O95711 162 aa12.65□□□□□ -0.39
DDX56-201ENST00000258772 SPCS3P61009 180 aa12.65□□□□□ -0.39
DDX56-201ENST00000258772 SRSF6Q13247 344 aaKnown RBP12.65□□□□□ -0.39
DDX56-201ENST00000258772 CLEC12BQ2HXU8 276 aa12.65□□□□□ -0.39
DDX56-201ENST00000258772 SSX9Q7RTT3 188 aa12.65□□□□□ -0.39
DDX56-201ENST00000258772 OR2Z1Q8NG97 314 aa12.65□□□□□ -0.39
DDX56-201ENST00000258772 RAB1CQ92928 201 aa12.65□□□□□ -0.39
DDX56-201ENST00000258772 IGKV1D-17A0A075B6S4 117 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 TRAV38-1A0A0B4J264 116 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 A0A1W2PPQ1 181 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 SRRM5B3KS81 715 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 MZT1Q08AG7 82 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 GAMTQ14353 236 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 TMEM249Q2WGJ8 235 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 PRAMEF5Q5TYX0 476 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 FAM90A1Q86YD7 464 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 OR4A16Q8NH70 328 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 SARAFQ96BY9 339 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 SVILO95425 2214 aa12.64□□□□□ -0.39
DDX56-201ENST00000258772 YPEL1O60688 119 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 IFNA10P01566 189 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 EDDM3BP56851 147 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 FAM3BP58499 235 aaPredicted RBP12.63□□□□□ -0.39
DDX56-201ENST00000258772 RPP30P78346 268 aaKnown RBP12.63□□□□□ -0.39
DDX56-201ENST00000258772 TRIP6Q15654 476 aaKnown RBP12.63□□□□□ -0.39
DDX56-201ENST00000258772 Q8TCH9 128 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 YPEL2Q96QA6 119 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 ZNF71Q9NQZ8 489 aaPredicted RBP12.63□□□□□ -0.39
DDX56-201ENST00000258772 JPT1Q9UK76 154 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 M0R1X1 148 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 GGCTO75223 188 aaKnown RBP12.63□□□□□ -0.39
DDX56-201ENST00000258772 CR1LQ2VPA4 569 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 COA6Q5JTJ3 125 aaKnown RBP12.63□□□□□ -0.39
DDX56-201ENST00000258772 C1orf174Q8IYL3 243 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 OR2T10Q8NGZ9 312 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 OR1P1Q8NH06 330 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 OR52E5Q8NH55 327 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 DUSP13Q9UII6 198 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 CADP27708 2225 aa12.63□□□□□ -0.39
DDX56-201ENST00000258772 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 MGST3O14880 152 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 PDE6DO43924 150 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 SOX15O60248 233 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 MPDU1O75352 247 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 CD82P27701 267 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 SRP14P37108 136 aaKnown RBP12.62□□□□□ -0.39
DDX56-201ENST00000258772 ZNF134P52741 427 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 LOXL3P58215 753 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 GNB1P62873 340 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 RPL39P5Q59GN2 51 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 IGFL2Q6UWQ7 119 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 TREML4Q6UXN2 200 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 VKORC1L1Q8N0U8 176 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 OR5T1Q8NG75 326 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 MEGF10Q96KG7 1140 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 FAM234AQ9H0X4 552 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 OPN3Q9H1Y3 402 aaPredicted RBP12.62□□□□□ -0.39
DDX56-201ENST00000258772 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
DDX56-201ENST00000258772 TRAV17A0A0B4J275 112 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 RRHO14718 337 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 RBFOX2O43251 390 aaKnown RBP eCLIP12.62□□□□□ -0.397e-8■□□□□ 9
DDX56-201ENST00000258772 TNFSF13O75888 250 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 CRYAAP02489 173 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 VDAC2P45880 294 aaPredicted RBP12.62□□□□□ -0.39
DDX56-201ENST00000258772 UBE2G2P60604 165 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 MSMPQ1L6U9 139 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 PPP1R35Q8TAP8 253 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 FAM216AQ8WUB2 273 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 STARD4Q96DR4 205 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 PATZ1Q9HBE1 687 aaKnown RBP12.62□□□□□ -0.39
DDX56-201ENST00000258772 LOC400499M0QZD8 3231 aa12.62□□□□□ -0.39
DDX56-201ENST00000258772 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 IGHV3-13P01766 116 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 IGHV3-7P01780 117 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 AMBPP02760 352 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 OPRK1P41145 380 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 ATP5G3P48201 142 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 RELBQ01201 579 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 DEFA6Q01524 100 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 CST9LP1Q5W188 147 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 BHLHA15Q7RTS1 189 aaPredicted RBP12.61□□□□□ -0.39
DDX56-201ENST00000258772 LINC01551Q86U37 167 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 LRP11Q86VZ4 500 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 GCSAMQ8N6F7 178 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 TMEM170AQ8WVE7 144 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 S100PBPQ96BU1 408 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 TRAV3A0A0B4J244 114 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 PRSS46E5RG02 174 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 F2RL2O00254 374 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 TMPRSS2O15393 492 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
DDX56-201ENST00000258772 GFRA3O60609 400 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 CGAP01215 116 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 TYMSP04818 313 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 BMP5P22003 454 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 CHRNA7P36544 502 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 CFHR2P36980 270 aa12.61□□□□□ -0.39
DDX56-201ENST00000258772 TMPRSS3P57727 454 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms