RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 H1FOOQ8IZA3 346 aaPredicted RBP16.11■□□□□ 0.17
NEDD8-201ENST00000250495 Q8N1Y9 231 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 C5orf30Q96GV9 206 aa16.11■□□□□ 0.17
NEDD8-201ENST00000250495 IGHV4-30-4P0DP06 118 aa16.1■□□□□ 0.17
NEDD8-201ENST00000250495 GALP22466 123 aa16.1■□□□□ 0.17
NEDD8-201ENST00000250495 OSR1Q8TAX0 266 aaPredicted RBP16.1■□□□□ 0.17
NEDD8-201ENST00000250495 DDB2Q92466 427 aa16.1■□□□□ 0.17
NEDD8-201ENST00000250495 ATG5Q9H1Y0 275 aa16.1■□□□□ 0.17
NEDD8-201ENST00000250495 CCDC59Q9P031 241 aaKnown RBP16.1■□□□□ 0.17
NEDD8-201ENST00000250495 TNCP24821 2201 aa16.1■□□□□ 0.17
NEDD8-201ENST00000250495 CRYZL1O95825 349 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 DTYMKP23919 212 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 SYNJ2BPP57105 145 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 TNXAQ16473 311 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 PRSS8Q16651 343 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 MRGPRG-AS1Q2M3A8 158 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 TM2D3Q9BRN9 247 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 DCSTAMPQ9H295 470 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 PALMDQ9NP74 551 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 C19orf73Q9NVV2 129 aa16.09■□□□□ 0.17
NEDD8-201ENST00000250495 MPPED1O15442 326 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 CTXN2P0C2S0 81 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 OR9G9P0C7N8 305 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 DYRK1AQ13627 763 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 RPEL1Q2QD12 228 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 CDNFQ49AH0 187 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 C22orf42Q6IC83 251 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 IL34Q6ZMJ4 242 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 SRSF12Q8WXF0 261 aaKnown RBP16.08■□□□□ 0.16
NEDD8-201ENST00000250495 SNAPC3Q92966 411 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 BORCS5Q969J3 196 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 CITED4Q96RK1 184 aa16.08■□□□□ 0.16
NEDD8-201ENST00000250495 IGKV1D-8A0A087WSZ0 117 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 A0A0B4J203 849 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 LINC00473A8K010 186 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 CREBL2O60519 120 aaPredicted RBP16.07■□□□□ 0.16
NEDD8-201ENST00000250495 APELAP0DMC3 54 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 LYL1P12980 280 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 LSM3P62310 102 aaKnown RBP16.07■□□□□ 0.16
NEDD8-201ENST00000250495 ADAD2Q8NCV1 583 aaKnown RBP16.07■□□□□ 0.16
NEDD8-201ENST00000250495 S100ZQ8WXG8 99 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 ACOT12Q8WYK0 555 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 ST6GALNAC5Q9BVH7 336 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 SLIRPQ9GZT3 109 aaKnown RBP16.07■□□□□ 0.16
NEDD8-201ENST00000250495 OR51E2Q9H255 320 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 SIGLEC8Q9NYZ4 499 aa16.07■□□□□ 0.16
NEDD8-201ENST00000250495 SLC22A5O76082 557 aa16.06■□□□□ 0.16
NEDD8-201ENST00000250495 ACTL6BO94805 426 aa16.06■□□□□ 0.16
NEDD8-201ENST00000250495 DEFA5Q01523 94 aa16.06■□□□□ 0.16
NEDD8-201ENST00000250495 IDO2Q6ZQW0 420 aa16.06■□□□□ 0.16
NEDD8-201ENST00000250495 ZNF645Q8N7E2 425 aa16.06■□□□□ 0.16
NEDD8-201ENST00000250495 WDR12Q9GZL7 423 aaKnown RBP16.06■□□□□ 0.16
NEDD8-201ENST00000250495 ELF5Q9UKW6 265 aaPredicted RBP16.06■□□□□ 0.16
NEDD8-201ENST00000250495 PRELID3BQ9Y3B1 194 aa16.06■□□□□ 0.16
NEDD8-201ENST00000250495 OR2W1Q9Y3N9 320 aa16.06■□□□□ 0.16
NEDD8-201ENST00000250495 J3QRK9 145 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 TRBV12-3P01733 135 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 CSN3P07498 182 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 CDK10Q15131 360 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 HACD4Q5VWC8 232 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 MMD2Q8IY49 270 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 SPIN2AQ99865 258 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 SPIN2BQ9BPZ2 258 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 NXF2Q9GZY0 626 aaKnown RBP16.05■□□□□ 0.16
NEDD8-201ENST00000250495 PEMTQ9UBM1 199 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 DNAH7Q8WXX0 4024 aa16.05■□□□□ 0.16
NEDD8-201ENST00000250495 LOC100506127A0A0U1RQW1 187 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 FAM223BA6NKX1 122 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 NOTOA8MTQ0 251 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 FCGR3BO75015 233 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 SCGNO76038 276 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 OR2A4O95047 310 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 HLA-DQB1P01920 261 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 RHOGP84095 191 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 ATP5G2Q06055 141 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 ZNF846Q147U1 533 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 LCN12Q6JVE5 192 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 GTSCR1Q86UQ5 136 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 NR2C2APQ86WQ0 139 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 FAM223AQ8IWN6 122 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 Q8N402 240 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 ZNF430Q9H8G1 570 aaPredicted RBP16.04■□□□□ 0.16
NEDD8-201ENST00000250495 ADAM30Q9UKF2 790 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 SSR3Q9UNL2 185 aa16.04■□□□□ 0.16
NEDD8-201ENST00000250495 MRPS7Q9Y2R9 242 aaKnown RBP16.04■□□□□ 0.16
NEDD8-201ENST00000250495 RBMXL2O75526 392 aaKnown RBP16.03■□□□□ 0.16
NEDD8-201ENST00000250495 SAA1P0DJI8 122 aaPredicted RBP16.03■□□□□ 0.16
NEDD8-201ENST00000250495 FGF9P31371 208 aaPredicted RBP16.03■□□□□ 0.16
NEDD8-201ENST00000250495 CNIH2Q6PI25 160 aa16.03■□□□□ 0.16
NEDD8-201ENST00000250495 KCTD9Q7L273 389 aa16.03■□□□□ 0.16
NEDD8-201ENST00000250495 SLC25A42Q86VD7 318 aa16.03■□□□□ 0.16
NEDD8-201ENST00000250495 TPRA1Q86W33 373 aa16.03■□□□□ 0.16
NEDD8-201ENST00000250495 TTC9CQ8N5M4 171 aa16.03■□□□□ 0.16
NEDD8-201ENST00000250495 AKIP1Q9NQ31 210 aa16.03■□□□□ 0.16
NEDD8-201ENST00000250495 RBMX2Q9Y388 322 aaKnown RBP16.03■□□□□ 0.16
NEDD8-201ENST00000250495 TRBV9A0A0B4J1U6 114 aa16.02■□□□□ 0.16
NEDD8-201ENST00000250495 SMIM30A4D0T7 59 aa16.02■□□□□ 0.16
NEDD8-201ENST00000250495 TUSC2O75896 110 aa16.02■□□□□ 0.16
NEDD8-201ENST00000250495 NFYAP23511 347 aaPredicted RBP16.02■□□□□ 0.16
NEDD8-201ENST00000250495 FAM209BQ5JX69 171 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms