RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 CENPVQ7Z7K6 275 aaPredicted RBP17.84■□□□□ 0.45
CLN6-201ENST00000249806 ZFP82Q8N141 532 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 TMEM140Q9NV12 185 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 IDI2-AS1Q9NZ38 188 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 ZNRD1Q9P1U0 126 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 GAB2Q9UQC2 676 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 SPTA1P02549 2419 aa17.84■□□□□ 0.45
CLN6-201ENST00000249806 A0A1W2PPE2 198 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 GNB2P62879 340 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 MRPS11P82912 194 aaKnown RBP17.83■□□□□ 0.45
CLN6-201ENST00000249806 RELBQ01201 579 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 TLE1Q04724 770 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 RHEBQ15382 184 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 AARDQ4LEZ3 155 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 ZNF439Q8NDP4 499 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 RND1Q92730 232 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 HIST1H2BAQ96A08 127 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 UNKLQ9H9P5 680 aaKnown RBP17.83■□□□□ 0.45
CLN6-201ENST00000249806 RAB9BQ9NP90 201 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 TIMM9Q9Y5J7 89 aa17.83■□□□□ 0.45
CLN6-201ENST00000249806 HMGB3O15347 200 aaKnown RBP17.83■□□□□ 0.44
CLN6-201ENST00000249806 ZNF429Q86V71 674 aa17.83■□□□□ 0.44
CLN6-201ENST00000249806 ZNF383Q8NA42 475 aa17.83■□□□□ 0.44
CLN6-201ENST00000249806 SAV1Q9H4B6 383 aaPredicted RBP17.83■□□□□ 0.44
CLN6-201ENST00000249806 SAP30LQ9HAJ7 183 aa17.83■□□□□ 0.44
CLN6-201ENST00000249806 A0A1W2PPH5 198 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 MAP1LC3B2A6NCE7 125 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 ZNF729A6NN14 1252 aaPredicted RBP17.82■□□□□ 0.44
CLN6-201ENST00000249806 SPCS3P61009 180 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 C2CD4CQ8TF44 421 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 CCL17Q92583 94 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 NEUROG1Q92886 237 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 MAP1LC3BQ9GZQ8 125 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 SLC39A9Q9NUM3 307 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 ZZEF1O43149 2961 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 FAM90A9PA6NNJ1 464 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 FCN3O75636 299 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 PAX6P26367 422 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 OR4S2Q8NH73 311 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 CORO2AQ92828 525 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 RAB39BQ96DA2 213 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 DIRC2Q96SL1 478 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 NPCDR1Q9BY65 106 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 TUBA4BQ9H853 241 aa17.82■□□□□ 0.44
CLN6-201ENST00000249806 IFNA10P01566 189 aa17.81■□□□□ 0.44
CLN6-201ENST00000249806 BCL2P10415 239 aa17.81■□□□□ 0.44
CLN6-201ENST00000249806 VWC2Q2TAL6 325 aa17.81■□□□□ 0.44
CLN6-201ENST00000249806 EGLN1Q9GZT9 426 aa17.81■□□□□ 0.44
CLN6-201ENST00000249806 LINC00574Q9H8X3 128 aa17.81■□□□□ 0.44
CLN6-201ENST00000249806 HEYLQ9NQ87 328 aaPredicted RBP17.81■□□□□ 0.44
CLN6-201ENST00000249806 SLC25A10Q9UBX3 287 aaPredicted RBP17.81■□□□□ 0.44
CLN6-201ENST00000249806 KIR2DS2P43631 304 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 RAB13P51153 203 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 RAB11AP62491 216 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 FAM24BQ8N5W8 94 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 RHOVQ96L33 236 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 CISD1Q9NZ45 108 aaKnown RBP17.8■□□□□ 0.44
CLN6-201ENST00000249806 RRHO14718 337 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 FFAR4Q5NUL3 377 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 ABHD12Q8N2K0 398 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.8■□□□□ 0.44
CLN6-201ENST00000249806 ZCCHC14Q8WYQ9 949 aaKnown RBP17.8■□□□□ 0.44
CLN6-201ENST00000249806 LHX4Q969G2 390 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 SLC25A22Q9H936 323 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 RPUSD1Q9UJJ7 312 aaKnown RBP17.8■□□□□ 0.44
CLN6-201ENST00000249806 MSRB2Q9Y3D2 182 aa17.8■□□□□ 0.44
CLN6-201ENST00000249806 TRAV38-1A0A0B4J264 116 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 hADV38S2A0JD32 116 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 TSPAN9O75954 239 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 DEFA4P12838 97 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 MDKP21741 143 aaPredicted RBP17.79■□□□□ 0.44
CLN6-201ENST00000249806 VDAC2P45880 294 aaPredicted RBP17.79■□□□□ 0.44
CLN6-201ENST00000249806 RBPJQ06330 500 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 OR10G4Q8NGN3 311 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 OR10G9Q8NGN4 311 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 OR10G7Q8NGN6 311 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 TMPRSS5Q9H3S3 457 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 TRGV8A0A0C4DH27 118 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 ZNF727A8MUV8 499 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 SHISA9B4DS77 424 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 TMEM178BH3BS89 294 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 THBS3P49746 956 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 DLK1P80370 383 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 OR52E5Q8NH55 327 aa17.79■□□□□ 0.44
CLN6-201ENST00000249806 ARFGEF3Q5TH69 2177 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 NKX6-3A6NJ46 265 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 E7EQL1 145 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 MT-ND4LP03901 98 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 CD1BP29016 333 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 RPL31P62899 125 aaKnown RBP17.78■□□□□ 0.44
CLN6-201ENST00000249806 OR4A47Q6IF82 309 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 DMRTC2Q8IXT2 367 aaPredicted RBP17.78■□□□□ 0.44
CLN6-201ENST00000249806 CA5BP1Q8WTZ4 195 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 RNASE6Q93091 150 aaKnown RBP17.78■□□□□ 0.44
CLN6-201ENST00000249806 LINC00312Q9Y6C7 94 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 TNCP24821 2201 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 PPIAL4EA0A075B759 164 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 PPIAL4DF5H284 164 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 GFRA3O60609 400 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 PPIAL4FP0DN26 164 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms