RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ACTL6BO94805 426 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 CD74P04233 296 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 AKAIN1P0CW23 69 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 CNTFRP26992 372 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 CD40LGP29965 261 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 GNRHRP30968 328 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 LINC00205P59089 165 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 ZNF818PQ6ZRF7 136 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 PPP1R27Q86WC6 154 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 NDUFA11Q86Y39 141 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 SPAG16Q8N0X2 631 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 ZFAND1Q8TCF1 268 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 ABHD5Q8WTS1 349 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 DEDD2Q8WXF8 326 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 ZNF486Q96H40 463 aaPredicted RBP8.9□□□□□ -0.98
SF3B6-201ENST00000233468 PRRT1Q99946 306 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 SOSTQ9BQB4 213 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 ZFP57Q9NU63 452 aa8.9□□□□□ -0.98
SF3B6-201ENST00000233468 IGHV7-81A0A0B4J1V7 117 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 TCRBV4S1A1TA0A5B7 111 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 CNIH1O95406 144 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 HPRT1P00492 218 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 PGAM2P15259 253 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 ETV6P41212 452 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 CX3CL1P78423 397 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 EIF4EBP1Q13541 118 aaPredicted RBP8.89□□□□□ -0.99
SF3B6-201ENST00000233468 SCGB2B2Q4G0G5 96 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 CXorf66Q5JRM2 361 aaPredicted RBP8.89□□□□□ -0.99
SF3B6-201ENST00000233468 CCDC190Q86UF4 302 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 Q8N402 240 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 C11orf44Q8N8P7 122 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 OR6Q1Q8NGQ2 317 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 TERB2Q8NHR7 220 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 WIPF2Q8TF74 440 aaPredicted RBP8.89□□□□□ -0.99
SF3B6-201ENST00000233468 TMEM68Q96MH6 324 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 SCGB3A2Q96PL1 93 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 HSPB9Q9BQS6 159 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 THAP7Q9BT49 309 aaPredicted RBP8.89□□□□□ -0.99
SF3B6-201ENST00000233468 TINAGL1Q9GZM7 467 aaPredicted RBP8.89□□□□□ -0.99
SF3B6-201ENST00000233468 PARP11Q9NR21 331 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 BATF3Q9NR55 127 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 SCP2D1Q9UJQ7 156 aa8.89□□□□□ -0.99
SF3B6-201ENST00000233468 TSSC4Q9Y5U2 329 aaPredicted RBP8.89□□□□□ -0.99
SF3B6-201ENST00000233468 TRAV41A0A0B4J266 112 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 ANKRD20A5PA0PJZ0 165 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 PGLYRP1O75594 196 aaPredicted RBP8.88□□□□□ -0.99
SF3B6-201ENST00000233468 CA2P00918 260 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 IGLV2-23P01705 113 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 ELANEP08246 267 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 CD28P10747 220 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 NQO2P16083 231 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 F2RP25116 425 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 SLC6A1P30531 599 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 INPP1P49441 399 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 TAS2R31P59538 309 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 ERVK-16P61578 105 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 RPL30P62888 115 aaKnown RBP8.88□□□□□ -0.99
SF3B6-201ENST00000233468 CD83Q01151 205 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 FOXE3Q13461 319 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 FXYD3Q14802 87 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 SURF2Q15527 256 aaPredicted RBP8.88□□□□□ -0.99
SF3B6-201ENST00000233468 OR2B11Q5JQS5 317 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 KHDC1LQ5JSQ8 128 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 TMEM65Q6PI78 240 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 ZNF329Q86UD4 541 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 MMD2Q8IY49 270 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 TOMM5Q8N4H5 51 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 CCDC71LQ8N9Z2 235 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 OR4F17Q8NGA8 305 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 OR51H1Q8NH63 302 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 OR4A5Q8NH83 315 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 ARPC1AQ92747 370 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 NOL4LQ96MY1 436 aaPredicted RBP8.88□□□□□ -0.99
SF3B6-201ENST00000233468 OR4F4Q96R69 305 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 CLCC1Q96S66 551 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 CITED2Q99967 270 aaPredicted RBP8.88□□□□□ -0.99
SF3B6-201ENST00000233468 RSRP1Q9BUV0 290 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 FXYD6Q9H0Q3 95 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 PLEKHA2Q9HB19 425 aa8.88□□□□□ -0.99
SF3B6-201ENST00000233468 FAM212BQ9NTI7 297 aaPredicted RBP8.88□□□□□ -0.99
SF3B6-201ENST00000233468 ATP6V0E1O15342 81 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 B3GALNT1O75752 331 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 ATG12O94817 140 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 OR2A4O95047 310 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 RLN1P04808 185 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 MAS1LP35410 378 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 GNB1P62873 340 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 AKIRIN2Q53H80 203 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 LINC00299Q6ZSB3 139 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 LHFPL1Q86WI0 220 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 C1QL4Q86Z23 238 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 GDPD1Q8N9F7 314 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 OR5M8Q8NGP6 311 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 RHOVQ96L33 236 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 OR2A7Q96R45 310 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 COMMD9Q9P000 198 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 COPZ2Q9P299 210 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 LINC00527Q9UJ94 153 aa8.87□□□□□ -0.99
SF3B6-201ENST00000233468 C14orf166Q9Y224 244 aaKnown RBP8.87□□□□□ -0.99
SF3B6-201ENST00000233468 V9GYH0 126 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms