RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SZT2Q5T011 3432 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 A0A1W2PRU2 124 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 C9JCJ5 164 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 H0YIG0 161 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 SLC31A1O15431 190 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 IL12BP29460 328 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 IGLV3-21P80748 117 aaPredicted RBP10.93□□□□□ -0.66
MSH2-201ENST00000233146 TFF3Q07654 80 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 LTC4SQ16873 150 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 FAM110CQ1W6H9 321 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 Q6ZSR3 168 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 TMEM45BQ96B21 275 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 DGAT2Q96PD7 388 aa10.93□□□□□ -0.66
MSH2-201ENST00000233146 ZNF207O43670 478 aaKnown RBP10.92□□□□□ -0.66
MSH2-201ENST00000233146 RHBDL1O75783 438 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 CD1BP29016 333 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 FAM120AOSQ5T036 256 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 Q6ZS49 121 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 EMC6Q9BV81 110 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 SPCS1Q9Y6A9 102 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 PDCD6O75340 191 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 IGKV1-39P01597 117 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 IGKV1D-39P04432 117 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 HNRNPA1P09651 372 aaKnown RBP eCLIP10.92□□□□□ -0.66
MSH2-201ENST00000233146 PSG2P11465 335 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 USF1P22415 310 aaPredicted RBP10.92□□□□□ -0.66
MSH2-201ENST00000233146 SLC35B1P78383 322 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 SPACA3Q8IXA5 215 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 A6NDN8 102 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 VSTM5A8MXK1 200 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 SYS1-DBNDD2H3BUS1 97 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 KIR2DS3Q14952 304 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 TCEA2Q15560 299 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 OR2T6Q8NHC8 308 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 SPSB4Q96A44 273 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 NAA38Q9BRA0 125 aaKnown RBP10.92□□□□□ -0.66
MSH2-201ENST00000233146 COPS7AQ9UBW8 275 aa10.92□□□□□ -0.66
MSH2-201ENST00000233146 A0A1W2PPM0 123 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 ADH4P08319 380 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 HIST1H1EP10412 219 aaKnown RBP10.91□□□□□ -0.66
MSH2-201ENST00000233146 CDAP32320 146 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 GRB2P62993 217 aaKnown RBP10.91□□□□□ -0.66
MSH2-201ENST00000233146 MALLQ13021 153 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 TMEM177Q53S58 311 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 H1FNTQ75WM6 255 aaPredicted RBP10.91□□□□□ -0.66
MSH2-201ENST00000233146 TMEM204Q9BSN7 226 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 IGKV1-27A0A075B6S5 117 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 FBLP22087 321 aaKnown RBP10.91□□□□□ -0.66
MSH2-201ENST00000233146 P2RY2P41231 377 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 UQCRFS1P47985 274 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 STARD5Q9NSY2 213 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 ZNF391Q9UJN7 358 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 RBMXL2O75526 392 aaKnown RBP10.91□□□□□ -0.66
MSH2-201ENST00000233146 IGKV1-5P01602 117 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 NOGQ13253 232 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 OSR2Q8N2R0 312 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 PMCHL2Q9BQD1 86 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 TMEM191AQ9H0A3 160 aa10.91□□□□□ -0.66
MSH2-201ENST00000233146 NXF5Q9H1B4 397 aaKnown RBP10.91□□□□□ -0.66
MSH2-201ENST00000233146 CEACAM5P06731 702 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 RPL31P62899 125 aaKnown RBP10.9□□□□□ -0.66
MSH2-201ENST00000233146 MFAP5Q13361 173 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 RNASEKQ6P5S7 137 aaKnown RBP10.9□□□□□ -0.66
MSH2-201ENST00000233146 LMX1AQ8TE12 382 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 KCNIP1Q9NZI2 227 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 JPT1Q9UK76 154 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 TRGV10A0A0A0MS01 117 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 TRAV38-1A0A0B4J264 116 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 IGKV1-12A0A0C4DH73 117 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 PMS2P5A8MQ11 134 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 EML2O95834 649 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 IGKV1D-12P01611 117 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 SCTP09683 121 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 COX8AP10176 69 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 GPM6BQ13491 265 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 ODF1Q14990 250 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 PDCD1Q15116 288 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 SHISA6Q6ZSJ9 500 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 FA2HQ7L5A8 372 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 BPIFA4PQ86YQ2 179 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 OR2D2Q9H210 308 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 ZNF442Q9H7R0 627 aa10.9□□□□□ -0.66
MSH2-201ENST00000233146 BOKQ9UMX3 212 aaPredicted RBP10.9□□□□□ -0.66
MSH2-201ENST00000233146 CA3P07451 260 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 IGFBP2P18065 325 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 MRPL16Q9NX20 251 aaKnown RBP10.89□□□□□ -0.67
MSH2-201ENST00000233146 SS18L2Q9UHA2 77 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 NCOA6Q14686 2063 aaPredicted RBP10.89□□□□□ -0.67
MSH2-201ENST00000233146 SP9P0CG40 484 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 KIR3DS1Q14943 382 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 ZNF718Q3SXZ3 478 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 Q8N7P7 452 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 OR51H1Q8NH63 302 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 C11orf52Q96A22 123 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 RTTNQ86VV8 2226 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 CLDN1O95832 211 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 VWC2Q2TAL6 325 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 GCSAMLQ5JQS6 135 aa10.89□□□□□ -0.67
MSH2-201ENST00000233146 KMT2EQ8IZD2 1858 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms