RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 UBE2KP61086 200 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 WDR25Q64LD2 544 aaPredicted RBP12.17□□□□□ -0.46
CCDC47-201ENST00000225726 NQO2P16083 231 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 FAM71F2Q6NXP2 309 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 STX12Q86Y82 276 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 ZNF843Q8N446 348 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 TMED6Q8WW62 240 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 RBKSQ9H477 322 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 ZNRD1Q9P1U0 126 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 J3QR06 171 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 RBP4P02753 201 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 IAPPP10997 89 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 C11orf42Q8N5U0 333 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 PSENENQ9NZ42 101 aa12.17□□□□□ -0.46
CCDC47-201ENST00000225726 CT45A6P0DMU7 189 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 CT45A5P0DMU8 189 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 CT45A7P0DMV0 189 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 ABCA4P78363 2273 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 SMG1Q96Q15 3661 aaKnown RBP12.16□□□□□ -0.46
CCDC47-201ENST00000225726 OR9G1Q8NH87 305 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 TMEM133Q9H2Q1 129 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 PATZ1Q9HBE1 687 aaKnown RBP12.16□□□□□ -0.46
CCDC47-201ENST00000225726 KLF2Q9Y5W3 355 aaPredicted RBP12.16□□□□□ -0.46
CCDC47-201ENST00000225726 FGF16O43320 207 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 OR9G9P0C7N8 305 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 EFNA4P52798 201 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 AARDQ4LEZ3 155 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 OR10X1Q8NGY0 326 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 GINS3Q9BRX5 216 aa12.16□□□□□ -0.46
CCDC47-201ENST00000225726 PPIAL4CA0A0B4J2A2 164 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 PPIAL4GP0DN37 164 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 ZP3P21754 424 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 SULT1A1P50225 295 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 RPP30P78346 268 aaKnown RBP12.15□□□□□ -0.46
CCDC47-201ENST00000225726 DHRS7BQ6IAN0 325 aaPredicted RBP12.15□□□□□ -0.46
CCDC47-201ENST00000225726 SSX9Q7RTT3 188 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 LY6G5BQ8NDX9 201 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 TSNAXQ99598 290 aaKnown RBP12.15□□□□□ -0.46
CCDC47-201ENST00000225726 HRNRQ86YZ3 2850 aaPredicted RBP12.15□□□□□ -0.46
CCDC47-201ENST00000225726 HOXA1P49639 335 aaPredicted RBP12.15□□□□□ -0.46
CCDC47-201ENST00000225726 RAB13P51153 203 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 DYNLT3P51808 116 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 RTL8BQ17RB0 113 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 ABHD12Q8N2K0 398 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 SFT2D1Q8WV19 159 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 TMEM186Q96B77 213 aa12.15□□□□□ -0.46
CCDC47-201ENST00000225726 CST7O76096 145 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 GPR6P46095 362 aaPredicted RBP12.14□□□□□ -0.47
CCDC47-201ENST00000225726 TLE4Q04727 773 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 ZNF266Q14584 549 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 OR1S2Q8NGQ3 325 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 SLC35D1Q9NTN3 355 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 SPTBN1Q01082 2364 aaKnown RBP12.14□□□□□ -0.47
CCDC47-201ENST00000225726 H3BP45 60 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 DNASE2O00115 360 aaPredicted RBP12.14□□□□□ -0.47
CCDC47-201ENST00000225726 RBMXL2O75526 392 aaKnown RBP12.14□□□□□ -0.47
CCDC47-201ENST00000225726 ZNF137PP52743 207 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 GNB2P62879 340 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 OR5C1Q8NGR4 320 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 TNFRSF14Q92956 283 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 MRPL20Q9BYC9 149 aaKnown RBP12.14□□□□□ -0.47
CCDC47-201ENST00000225726 TMEM231Q9H6L2 316 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 TMEM140Q9NV12 185 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 CACNA1BQ00975 2339 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 C1QL1O75973 258 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
CCDC47-201ENST00000225726 POU2AF1Q16633 256 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 OR4A16Q8NH70 328 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
CCDC47-201ENST00000225726 CACFD1Q9UGQ2 172 aa12.14□□□□□ -0.47
CCDC47-201ENST00000225726 OVOL3O00110 214 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 HRASP01112 189 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 LIPFP07098 398 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 FAM157CP0CG43 387 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 IL3RAP26951 378 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 CIB3Q96Q77 187 aaPredicted RBP12.13□□□□□ -0.47
CCDC47-201ENST00000225726 CFAP46Q8IYW2 2715 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 APOA2P02652 100 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 BTF3P20290 206 aaKnown RBP12.13□□□□□ -0.47
CCDC47-201ENST00000225726 DEFA6Q01524 100 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 DTD1Q8TEA8 209 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 ATP5SQ99766 215 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 BARX1Q9HBU1 254 aaPredicted RBP12.13□□□□□ -0.47
CCDC47-201ENST00000225726 BIN3Q9NQY0 253 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 hCG_1809904A0A1W2PP81 198 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 A0A1W2PPE2 198 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 A0A1W2PR64 198 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 A0A1W2PRV1 198 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 NDUFS7O75251 213 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 SEC11BP0C7V7 166 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 RELBQ01201 579 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 TMEM217Q8N7C4 229 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 OR52E5Q8NH55 327 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 ST6GALNAC6Q969X2 333 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 SSBP3Q9BWW4 388 aaPredicted RBP12.13□□□□□ -0.47
CCDC47-201ENST00000225726 REG4Q9BYZ8 158 aa12.13□□□□□ -0.47
CCDC47-201ENST00000225726 SOX15O60248 233 aa12.12□□□□□ -0.47
CCDC47-201ENST00000225726 FBXO24O75426 580 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms