RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 MBD3L1Q8WWY6 194 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 LSM10Q969L4 123 aaKnown RBP10.94□□□□□ -0.66
CTNS-201ENST00000046640 RELNP78509 3460 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 ZNF891A8MT65 544 aaPredicted RBP10.94□□□□□ -0.66
CTNS-201ENST00000046640 H7BYZ3 331 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 IFNA1P01562 189 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 OPN1MWP04001 364 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 OPN1MW2P0DN77 364 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 OPN1MW3P0DN78 364 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 FGF7P21781 194 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 FAM3BP58499 235 aaPredicted RBP10.94□□□□□ -0.66
CTNS-201ENST00000046640 MEF2BQ02080 365 aaPredicted RBP10.94□□□□□ -0.66
CTNS-201ENST00000046640 FAM27E3Q08E93 113 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 VKORC1L1Q8N0U8 176 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 OR13D1Q8NGV5 346 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 OR2V2Q96R30 315 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 TMEM204Q9BSN7 226 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 PARLQ9H300 379 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 FUT9Q9Y231 359 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 FAM215AQ9Y5M1 114 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 SLC25A15Q9Y619 301 aa10.94□□□□□ -0.66
CTNS-201ENST00000046640 ZGRF1Q86YA3 2104 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 POLEQ07864 2286 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 ODAMA1E959 279 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 PAGE4O60829 102 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 ZG16O60844 167 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 SNRPCP09234 159 aaKnown RBP10.93□□□□□ -0.66
CTNS-201ENST00000046640 HNF1AP20823 631 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 RPL23P62829 140 aaKnown RBP10.93□□□□□ -0.66
CTNS-201ENST00000046640 FFAR4Q5NUL3 377 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 SLC35E4Q6ICL7 350 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 OR10G4Q8NGN3 311 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 OR10G9Q8NGN4 311 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 OR10G7Q8NGN6 311 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 LURAP1Q96LR2 239 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 GNG12Q9UBI6 72 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 WASF3Q9UPY6 502 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 IGKV1D-17A0A075B6S4 117 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 C1QTNF9BB2RNN3 333 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 IGLV1-44P01699 117 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 AMBPP02760 352 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 KITLGP21583 273 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 RND2P52198 227 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 DUX4L9Q6RFH8 374 aaPredicted RBP10.93□□□□□ -0.66
CTNS-201ENST00000046640 SDSLQ96GA7 329 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 OR5B12Q96R08 314 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 NAT8Q9UHE5 227 aa10.93□□□□□ -0.66
CTNS-201ENST00000046640 A0A0U1RQK1 487 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 PPP5D1E7EU14 171 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 BTF3P20290 206 aaKnown RBP10.92□□□□□ -0.66
CTNS-201ENST00000046640 PSMB3P49720 205 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 TNFRSF9Q07011 255 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 GCSAMLQ5JQS6 135 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 C1orf162Q8NEQ5 155 aaPredicted RBP10.92□□□□□ -0.66
CTNS-201ENST00000046640 OR51G1Q8NGK1 321 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 PGPEP1LA6NFU8 196 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 COL8A2P25067 703 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 SERF2P84101 59 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 PITPNC1Q9UKF7 332 aa10.92□□□□□ -0.66
CTNS-201ENST00000046640 A0A1B0GUS0 222 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 TCF15Q12870 199 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 RPL39P5Q59GN2 51 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 TGIF2LYQ8IUE0 185 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 TGIF2LXQ8IUE1 241 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 PSMG3Q9BT73 122 aaPredicted RBP10.91□□□□□ -0.66
CTNS-201ENST00000046640 TRBV24-1A0A075B6N3 115 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 RNF212BA8MTL3 300 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 FCGR3BO75015 233 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 SLC25A6P12236 298 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 CST9LP1Q5W188 147 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 H2BFWTQ7Z2G1 175 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 GCSAMQ8N6F7 178 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 OR1P1Q8NH06 330 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 ITLN1Q8WWA0 313 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 PTPRBP23467 1997 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 SPINT2O43291 252 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 IFNA10P01566 189 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 PFN1P07737 140 aaKnown RBP10.91□□□□□ -0.66
CTNS-201ENST00000046640 GZMBP10144 247 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 CATR1Q13166 79 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 PMS2P11Q13670 270 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 MBNL2Q5VZF2 373 aaKnown RBP10.91□□□□□ -0.66
CTNS-201ENST00000046640 TMEM183AQ8IXX5 376 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 ZCCHC24Q8N2G6 241 aaKnown RBP10.91□□□□□ -0.66
CTNS-201ENST00000046640 RAB24Q969Q5 203 aa10.91□□□□□ -0.66
CTNS-201ENST00000046640 NBASA2RRP1 2371 aa10.9□□□□□ -0.66
CTNS-201ENST00000046640 LRRC30A6NM36 301 aa10.9□□□□□ -0.66
CTNS-201ENST00000046640 KBTBD11O94819 623 aa10.9□□□□□ -0.66
CTNS-201ENST00000046640 GYPAP02724 150 aa10.9□□□□□ -0.66
CTNS-201ENST00000046640 SPCS3P61009 180 aa10.9□□□□□ -0.66
CTNS-201ENST00000046640 PINX1Q96BK5 328 aaKnown RBP10.9□□□□□ -0.66
CTNS-201ENST00000046640 P2RX4Q99571 388 aa10.9□□□□□ -0.66
CTNS-201ENST00000046640 BSNQ9UPA5 3926 aa10.9□□□□□ -0.66
CTNS-201ENST00000046640 TRAV38-1A0A0B4J264 116 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 MBD3L4A6NDZ8 208 aaPredicted RBP10.9□□□□□ -0.67
CTNS-201ENST00000046640 MBD3L3A6NE82 208 aaPredicted RBP10.9□□□□□ -0.67
CTNS-201ENST00000046640 MBD3L5A6NJ08 208 aaPredicted RBP10.9□□□□□ -0.67
CTNS-201ENST00000046640 TCAPO15273 167 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 PROP1O75360 226 aa10.9□□□□□ -0.67
CTNS-201ENST00000046640 ZNF134P52741 427 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms