RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 KLRB1Q12918 225 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 HIST3H3Q16695 136 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 CMTM2Q8TAZ6 248 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 HES4Q9HCC6 221 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 RYDENQ9NUL5 291 aaKnown RBP10.15□□□□□ -0.78
CHPF2-201ENST00000035307 OR6C3Q9NZP0 311 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 IGHV1-18A0A0C4DH31 117 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 RAMP3O60896 148 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 RBP4P02753 201 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 GZMHP20718 246 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 PSG5Q15238 335 aa10.15□□□□□ -0.78
CHPF2-201ENST00000035307 MARCH11A6NNE9 402 aa10.15□□□□□ -0.79
CHPF2-201ENST00000035307 DNASE2O00115 360 aaPredicted RBP10.15□□□□□ -0.79
CHPF2-201ENST00000035307 HRASP01112 189 aa10.15□□□□□ -0.79
CHPF2-201ENST00000035307 GRNP28799 593 aaKnown RBP10.15□□□□□ -0.79
CHPF2-201ENST00000035307 NUBP1P53384 320 aa10.15□□□□□ -0.79
CHPF2-201ENST00000035307 OR4S2Q8NH73 311 aa10.15□□□□□ -0.79
CHPF2-201ENST00000035307 REG4Q9BYZ8 158 aa10.15□□□□□ -0.79
CHPF2-201ENST00000035307 MYOZ1Q9NP98 299 aaPredicted RBP10.15□□□□□ -0.79
CHPF2-201ENST00000035307 DCAF16Q9NXF7 216 aa10.15□□□□□ -0.79
CHPF2-201ENST00000035307 CLCF1Q9UBD9 225 aa10.15□□□□□ -0.79
CHPF2-201ENST00000035307 IGKV3D-15A0A087WSY6 115 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 PRB1P04280 392 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 REG1AP05451 166 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 DANCRP0C864 163 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 CD40P25942 277 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 HCP5Q6MZN7 132 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 FAM216BQ8N7L0 139 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 CTDSP1Q9GZU7 261 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 LIME1Q9H400 295 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 FUT9Q9Y231 359 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 hADV38S2A0JD32 116 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 TNXAQ16473 311 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 RNF212Q495C1 297 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 NEIL1Q96FI4 390 aaPredicted RBP10.14□□□□□ -0.79
CHPF2-201ENST00000035307 MRPS18CQ9Y3D5 142 aaKnown RBP10.14□□□□□ -0.79
CHPF2-201ENST00000035307 CFAP47Q6ZTR5 3102 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 PQLC2LA1A4F0 135 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 K7ENP7 123 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 CAMPP49913 170 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 ERVFRD-1P60508 538 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 HFEQ30201 348 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 TAF15Q92804 592 aaKnown RBP eCLIP10.14□□□□□ -0.79
CHPF2-201ENST00000035307 C1orf147Q96MC9 270 aaPredicted RBP10.14□□□□□ -0.79
CHPF2-201ENST00000035307 TNFRSF19Q9NS68 423 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 KIAA1456Q9P272 454 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 MIOXQ9UGB7 285 aa10.14□□□□□ -0.79
CHPF2-201ENST00000035307 ARHGAP32A7KAX9 2087 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 XKRY2A2RUG3 117 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 NDUFB4O95168 129 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 FABP1P07148 127 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 PMCHP20382 165 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 NPY1RP25929 384 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 RPL11P62913 178 aaKnown RBP10.13□□□□□ -0.79
CHPF2-201ENST00000035307 HABP2Q14520 560 aaPredicted RBP10.13□□□□□ -0.79
CHPF2-201ENST00000035307 OR10A7Q8NGE5 316 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 IL22RA2Q969J5 263 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 RAB24Q969Q5 203 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 USB1Q9BQ65 265 aaKnown RBP10.13□□□□□ -0.79
CHPF2-201ENST00000035307 MRPL37Q9BZE1 423 aaKnown RBP10.13□□□□□ -0.79
CHPF2-201ENST00000035307 ATMQ13315 3056 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 TRBV23-1A0A0A0MS06 115 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 AP4M1O00189 453 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 SS18L1O75177 396 aaPredicted RBP10.13□□□□□ -0.79
CHPF2-201ENST00000035307 BCL2P10415 239 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 PMS2P11Q13670 270 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 C20orf204Q6ZNR8 217 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 LHFPL1Q86WI0 220 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 VAX2Q9UIW0 290 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 J3QR06 171 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 KRTDAPP60985 99 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 GNB2P62879 340 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 TNFRSF9Q07011 255 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 GALNT14Q96FL9 552 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 TRAPPC1Q9Y5R8 145 aa10.13□□□□□ -0.79
CHPF2-201ENST00000035307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.12□□□□□ -0.79
CHPF2-201ENST00000035307 ETV2O00321 342 aaPredicted RBP10.12□□□□□ -0.79
CHPF2-201ENST00000035307 PLXNB1O43157 2135 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 PSPNO60542 156 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 PTBP3O95758 552 aaKnown RBP10.12□□□□□ -0.79
CHPF2-201ENST00000035307 RAB4AP20338 218 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 IL3RAP26951 378 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 CDKN1AP38936 164 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
CHPF2-201ENST00000035307 SLC35E3Q7Z769 313 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 RPEQ96AT9 228 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 METRNQ9UJH8 293 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 FAM215AQ9Y5M1 114 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 GNLYP22749 145 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 CD1BP29016 333 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 NHLRC2Q8NBF2 726 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 NUDT16L1Q9BRJ7 211 aaKnown RBP10.12□□□□□ -0.79
CHPF2-201ENST00000035307 LAMA5O15230 3695 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 GATA2P23769 480 aaPredicted RBP10.12□□□□□ -0.79
CHPF2-201ENST00000035307 SUB1P53999 127 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHPF2-201ENST00000035307 DLX1P56177 255 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 TFF3Q07654 80 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
CHPF2-201ENST00000035307 RCC1LQ96I51 464 aaKnown RBP10.12□□□□□ -0.79
CHPF2-201ENST00000035307 SFXN3Q9BWM7 321 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms