RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YNR029CP53729 429 aaKnown RBP4.38□□□□□ -1.71
ATG38YLR211C ARG7Q04728 441 aa4.38□□□□□ -1.71
ATG38YLR211C MDM20Q12387 796 aaKnown RBP4.38□□□□□ -1.71
ATG38YLR211C LEU2P04173 364 aaPredicted RBP4.37□□□□□ -1.71
ATG38YLR211C CDC26P14724 124 aa4.37□□□□□ -1.71
ATG38YLR211C PRP22P24384 1145 aaKnown RBP4.37□□□□□ -1.71
ATG38YLR211C MTC7P32633 139 aa4.37□□□□□ -1.71
ATG38YLR211C UGP1P32861 499 aaKnown RBP4.37□□□□□ -1.71
ATG38YLR211C OAF1P39720 1047 aaPredicted RBP4.37□□□□□ -1.71
ATG38YLR211C FTR1P40088 404 aa4.37□□□□□ -1.71
ATG38YLR211C BFA1P47113 574 aa4.37□□□□□ -1.71
ATG38YLR211C YGL117WP53133 265 aa4.37□□□□□ -1.71
ATG38YLR211C SPO1P53541 631 aa4.37□□□□□ -1.71
ATG38YLR211C HOF1Q05080 669 aa4.37□□□□□ -1.71
ATG38YLR211C ULA1Q12059 462 aa4.37□□□□□ -1.71
ATG38YLR211C ADE5,7P07244 802 aaKnown RBP4.36□□□□□ -1.71
ATG38YLR211C ORC2P32833 620 aa4.36□□□□□ -1.71
ATG38YLR211C MRPL7P36519 292 aa4.36□□□□□ -1.71
ATG38YLR211C GPP1P41277 250 aaKnown RBP4.36□□□□□ -1.71
ATG38YLR211C GZF3P42944 551 aaKnown RBP4.36□□□□□ -1.71
ATG38YLR211C TAF4P50105 388 aa4.36□□□□□ -1.71
ATG38YLR211C FMP30Q02883 468 aa4.36□□□□□ -1.71
ATG38YLR211C UME1Q03010 460 aa4.36□□□□□ -1.71
ATG38YLR211C FDC1Q03034 503 aa4.36□□□□□ -1.71
ATG38YLR211C NGL2Q03264 515 aaKnown RBP4.36□□□□□ -1.71
ATG38YLR211C TRS23Q03784 219 aa4.36□□□□□ -1.71
ATG38YLR211C RIM13Q03792 727 aa4.36□□□□□ -1.71
ATG38YLR211C YHM2Q04013 314 aa4.36□□□□□ -1.71
ATG38YLR211C DUN1P39009 513 aa4.35□□□□□ -1.71
ATG38YLR211C PRM2P40534 656 aa4.35□□□□□ -1.71
ATG38YLR211C UTP14Q04500 899 aaKnown RBP4.35□□□□□ -1.71
ATG38YLR211C APM4Q99186 491 aa4.35□□□□□ -1.71
ATG38YLR211C ERG11P10614 530 aa4.34□□□□□ -1.71
ATG38YLR211C VID28P40547 921 aa4.34□□□□□ -1.71
ATG38YLR211C SNM1P40993 198 aa4.34□□□□□ -1.71
ATG38YLR211C MNN11P46985 422 aaKnown RBP4.34□□□□□ -1.71
ATG38YLR211C TAX4P47030 604 aa4.34□□□□□ -1.71
ATG38YLR211C YDL183CP48569 320 aa4.34□□□□□ -1.71
ATG38YLR211C YGR054WP53235 642 aaKnown RBP4.34□□□□□ -1.71
ATG38YLR211C PPN1Q04119 674 aa4.34□□□□□ -1.71
ATG38YLR211C SLK19Q08581 821 aaKnown RBP4.34□□□□□ -1.71
ATG38YLR211C YTM1Q12024 460 aaPredicted RBP4.34□□□□□ -1.71
ATG38YLR211C PPE1P38796 400 aa4.33□□□□□ -1.72
ATG38YLR211C PIP2P52960 996 aa4.33□□□□□ -1.72
ATG38YLR211C YIP4P53093 235 aa4.33□□□□□ -1.72
ATG38YLR211C CPR8P53728 308 aa4.33□□□□□ -1.72
ATG38YLR211C EFR3Q03653 782 aaKnown RBP4.33□□□□□ -1.72
ATG38YLR211C NSE5Q03718 556 aa4.33□□□□□ -1.72
ATG38YLR211C AFT2Q08957 416 aa4.33□□□□□ -1.72
ATG38YLR211C MBR1P23493 339 aa4.32□□□□□ -1.72
ATG38YLR211C AAD3P25612 363 aa4.32□□□□□ -1.72
ATG38YLR211C MF(ALPHA)2P32435 120 aa4.32□□□□□ -1.72
ATG38YLR211C EHT1P38295 451 aa4.32□□□□□ -1.72
ATG38YLR211C PMT3P47190 753 aa4.32□□□□□ -1.72
ATG38YLR211C DAK1P54838 584 aaKnown RBP4.32□□□□□ -1.72
ATG38YLR211C SEG1Q04279 960 aa4.32□□□□□ -1.72
ATG38YLR211C HLR1Q04429 423 aa4.32□□□□□ -1.72
ATG38YLR211C NUP145P49687 1317 aa4.31□□□□□ -1.72
ATG38YLR211C ACO1P19414 778 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
ATG38YLR211C CNE1P27825 502 aa4.31□□□□□ -1.72
ATG38YLR211C DAL3P32459 195 aa4.31□□□□□ -1.72
ATG38YLR211C SER1P33330 395 aaKnown RBP4.31□□□□□ -1.72
ATG38YLR211C PGK1P00560 416 aaKnown RBP4.3□□□□□ -1.72
ATG38YLR211C PMA2P19657 947 aa4.3□□□□□ -1.72
ATG38YLR211C NUP1P20676 1076 aa4.3□□□□□ -1.72
ATG38YLR211C ATP12P22135 325 aa4.3□□□□□ -1.72
ATG38YLR211C DID4P36108 232 aa4.3□□□□□ -1.72
ATG38YLR211C BNA3P47039 444 aaKnown RBP4.3□□□□□ -1.72
ATG38YLR211C YNL018CP53976 612 aa4.3□□□□□ -1.72
ATG38YLR211C RPS15Q01855 142 aaKnown RBP4.3□□□□□ -1.72
ATG38YLR211C ARR3Q06598 404 aa4.3□□□□□ -1.72
ATG38YLR211C AI5_ALPHAQ9ZZX1 630 aa4.3□□□□□ -1.72
ATG38YLR211C HXT4P32467 576 aa4.29□□□□□ -1.72
ATG38YLR211C HOT13P36078 116 aa4.29□□□□□ -1.72
ATG38YLR211C YHR033WP38690 423 aa4.29□□□□□ -1.72
ATG38YLR211C PTA1Q01329 785 aaPredicted RBP4.29□□□□□ -1.72
ATG38YLR211C MFM1Q02783 413 aa4.29□□□□□ -1.72
ATG38YLR211C YCG1Q06680 1035 aa4.29□□□□□ -1.72
ATG38YLR211C ICT1Q12385 394 aa4.29□□□□□ -1.72
ATG38YLR211C HMG2P12684 1045 aa4.28□□□□□ -1.72
ATG38YLR211C APN1P22936 367 aa4.28□□□□□ -1.72
ATG38YLR211C RMA1P36001 430 aaKnown RBP4.28□□□□□ -1.72
ATG38YLR211C LRO1P40345 661 aa4.28□□□□□ -1.72
ATG38YLR211C YGR237CP50089 785 aa4.28□□□□□ -1.72
ATG38YLR211C BUD17P53727 317 aa4.28□□□□□ -1.72
ATG38YLR211C FRE7Q12333 620 aa4.28□□□□□ -1.72
ATG38YLR211C ZPS1Q12512 249 aa4.28□□□□□ -1.72
ATG38YLR211C YGR161W-CQ3E744 92 aa4.28□□□□□ -1.72
ATG38YLR211C CPA2P03965 1118 aaKnown RBP4.27□□□□□ -1.73
ATG38YLR211C RPL7AP05737 244 aaKnown RBP4.27□□□□□ -1.73
ATG38YLR211C HOP1P20050 605 aa4.27□□□□□ -1.73
ATG38YLR211C TMT1P32643 299 aa4.27□□□□□ -1.73
ATG38YLR211C YPT10P38146 199 aa4.27□□□□□ -1.73
ATG38YLR211C THI6P41835 540 aa4.27□□□□□ -1.73
ATG38YLR211C FAP7Q12055 197 aaPredicted RBP4.27□□□□□ -1.73
ATG38YLR211C RPL7BQ12213 244 aaKnown RBP4.27□□□□□ -1.73
ATG38YLR211C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
ATG38YLR211C AQY1P0CD91 305 aa4.26□□□□□ -1.73
ATG38YLR211C RIM4P38741 713 aa4.26□□□□□ -1.73
ATG38YLR211C XBP1P40489 647 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms