RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	DAS2	Q12084	232 aa		10.69	□□□□□ -0.7
SHB17	YKR043C	YRR1	Q12172	810 aa		10.69	□□□□□ -0.7
SHB17	YKR043C	VPS5	Q92331	675 aa		10.69	□□□□□ -0.7
SHB17	YKR043C	HIS5	P07172	385 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	ADE3	P07245	946 aa	Known RBP	10.68	□□□□□ -0.7
SHB17	YKR043C	ERG11	P10614	530 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	SEC23	P15303	768 aa	Known RBP	10.68	□□□□□ -0.7
SHB17	YKR043C	HXT1	P32465	570 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	BLI1	P35727	113 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	EBP2	P36049	427 aa	Known RBP	10.68	□□□□□ -0.7
SHB17	YKR043C	ATG12	P38316	186 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	TMA108	P40462	946 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	OSW7	P43611	510 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	SFB2	P53953	876 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	SOV1	Q04748	898 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	PMT7	Q06644	662 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	YOR387C	Q08910	206 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	ARP7	Q12406	477 aa		10.68	□□□□□ -0.7
SHB17	YKR043C	ENO2	P00925	437 aa	Known RBP	10.67	□□□□□ -0.7
SHB17	YKR043C	RPS14A	P06367	137 aa	Known RBP	10.67	□□□□□ -0.7
SHB17	YKR043C	CYC8	P14922	966 aa		10.67	□□□□□ -0.7
SHB17	YKR043C	SEG2	P34250	1132 aa		10.67	□□□□□ -0.7
SHB17	YKR043C	NMD3	P38861	518 aa	Known RBP	10.67	□□□□□ -0.7
SHB17	YKR043C	LYS9	P38999	446 aa		10.67	□□□□□ -0.7
SHB17	YKR043C	RPS14B	P39516	138 aa	Known RBP	10.67	□□□□□ -0.7
SHB17	YKR043C	ASG1	P40467	964 aa		10.67	□□□□□ -0.7
SHB17	YKR043C	UFE1	P41834	346 aa		10.67	□□□□□ -0.7
SHB17	YKR043C	YGR283C	P53336	341 aa	Predicted RBP	10.67	□□□□□ -0.7
SHB17	YKR043C	ELP3	Q02908	557 aa	Known RBP	10.67	□□□□□ -0.7
SHB17	YKR043C	YLR001C	Q07895	862 aa		10.67	□□□□□ -0.7
SHB17	YKR043C	CIR2	Q08822	631 aa		10.67	□□□□□ -0.7
SHB17	YKR043C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	10.66	□□□□□ -0.7	not detected
SHB17	YKR043C	HIS2	P38635	335 aa		10.66	□□□□□ -0.7
SHB17	YKR043C	MED6	P38782	295 aa		10.66	□□□□□ -0.7
SHB17	YKR043C	EFM4	P40516	257 aa		10.66	□□□□□ -0.7
SHB17	YKR043C	YIL054W	P40524	105 aa		10.66	□□□□□ -0.7
SHB17	YKR043C	ART5	P53244	586 aa	Known RBP	10.66	□□□□□ -0.7
SHB17	YKR043C	JJJ1	P53863	590 aa		10.66	□□□□□ -0.7
SHB17	YKR043C	KTR6	P54070	446 aa		10.66	□□□□□ -0.7
SHB17	YKR043C	SVS1	Q12254	260 aa		10.66	□□□□□ -0.7
SHB17	YKR043C	GFA1	P14742	717 aa	Known RBP	10.65	□□□□□ -0.7
SHB17	YKR043C	TRX1	P22217	103 aa	Known RBP	10.65	□□□□□ -0.7
SHB17	YKR043C	YIH1	P25637	258 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	DBF4	P32325	704 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	SWC5	P38326	303 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	TCD1	P38756	429 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	SAP185	P40856	1058 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	COQ6	P53318	479 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	BIO5	P53744	561 aa	Known RBP	10.65	□□□□□ -0.7
SHB17	YKR043C	TOF2	Q02208	771 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	ATG16	Q03818	150 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	YDR278C	Q05612	105 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	NSE1	Q07913	336 aa		10.65	□□□□□ -0.7
SHB17	YKR043C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	10.65	□□□□□ -0.7	not detected
SHB17	YKR043C	ARP1	P38696	384 aa		10.64	□□□□□ -0.71
SHB17	YKR043C	SPC72	P39723	622 aa		10.64	□□□□□ -0.71
SHB17	YKR043C	SEC9	P40357	651 aa		10.64	□□□□□ -0.71
SHB17	YKR043C	CHS6	P40955	746 aa		10.64	□□□□□ -0.71
SHB17	YKR043C	GYP8	P43570	497 aa		10.64	□□□□□ -0.71
SHB17	YKR043C	PEX31	P53203	462 aa		10.64	□□□□□ -0.71
SHB17	YKR043C	DIG1	Q03063	452 aa	Known RBP	10.64	□□□□□ -0.71
SHB17	YKR043C	RKM2	Q03942	479 aa		10.64	□□□□□ -0.71
SHB17	YKR043C	SEG1	Q04279	960 aa		10.64	□□□□□ -0.71
SHB17	YKR043C	ECM38	Q05902	660 aa	Predicted RBP	10.64	□□□□□ -0.71
SHB17	YKR043C	YPK1	P12688	680 aa	Known RBP	10.63	□□□□□ -0.71
SHB17	YKR043C	CAP1	P28495	268 aa	Known RBP	10.63	□□□□□ -0.71
SHB17	YKR043C	PSE1	P32337	1089 aa	Known RBP	10.63	□□□□□ -0.71
SHB17	YKR043C	MCX1	P38323	520 aa	Predicted RBP	10.63	□□□□□ -0.71
SHB17	YKR043C	RRT2	P38332	387 aa		10.63	□□□□□ -0.71
SHB17	YKR043C	PMC1	P38929	1173 aa	Predicted RBP	10.63	□□□□□ -0.71
SHB17	YKR043C	DOT6	P40059	670 aa	Known RBP	10.63	□□□□□ -0.71
SHB17	YKR043C	RTT101	P47050	842 aa		10.63	□□□□□ -0.71
SHB17	YKR043C	ATH1	P48016	1211 aa		10.63	□□□□□ -0.71
SHB17	YKR043C	BRO1	P48582	844 aa		10.63	□□□□□ -0.71
SHB17	YKR043C	KAP114	P53067	1004 aa		10.63	□□□□□ -0.71
SHB17	YKR043C	YNL108C	P53929	270 aa		10.63	□□□□□ -0.71
SHB17	YKR043C	CDC55	Q00362	526 aa		10.63	□□□□□ -0.71
SHB17	YKR043C	IVY1	Q04934	453 aa		10.63	□□□□□ -0.71
SHB17	YKR043C	AAD4	Q07747	329 aa		10.63	□□□□□ -0.71
SHB17	YKR043C	REV1	P12689	985 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	MRM1	P25270	412 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	SWE1	P32944	819 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	SGE1	P33335	543 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	MFT1	P33441	392 aa	Known RBP	10.62	□□□□□ -0.71
SHB17	YKR043C	STO1	P34160	861 aa	Known RBP	10.62	□□□□□ -0.71
SHB17	YKR043C	NEM1	P38757	446 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	GGA2	P38817	585 aa	Known RBP	10.62	□□□□□ -0.71
SHB17	YKR043C	KHA1	P40309	873 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	YJR079W	P47126	109 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	BTN2	P53286	410 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	COP1	P53622	1201 aa	Known RBP	10.62	□□□□□ -0.71
SHB17	YKR043C	BET4	Q00618	327 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	YPL014W	Q02606	381 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	SND1	Q04007	877 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	RTN1	Q04947	295 aa	Known RBP	10.62	□□□□□ -0.71
SHB17	YKR043C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	10.62	□□□□□ -0.71	not detected
SHB17	YKR043C	THI21	Q08975	551 aa		10.62	□□□□□ -0.71
SHB17	YKR043C	PDR1	P12383	1068 aa		10.61	□□□□□ -0.71
SHB17	YKR043C	MET16	P18408	261 aa	Predicted RBP	10.61	□□□□□ -0.71
SHB17	YKR043C	PTC3	P34221	468 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms