RNA–Protein interactions for RNA: YJL203W

PRP21, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP21, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP21	YJL203W	HOT13	P36078	116 aa		4.3	□□□□□ -1.72
PRP21	YJL203W	TMN3	P40071	706 aa		4.3	□□□□□ -1.72
PRP21	YJL203W	PXA1	P41909	870 aa		4.3	□□□□□ -1.72
PRP21	YJL203W	RET2	P43621	546 aa		4.3	□□□□□ -1.72
PRP21	YJL203W	BFA1	P47113	574 aa		4.3	□□□□□ -1.72
PRP21	YJL203W	DAK1	P54838	584 aa	Known RBP	4.3	□□□□□ -1.72
PRP21	YJL203W	TRS23	Q03784	219 aa		4.3	□□□□□ -1.72
PRP21	YJL203W	STP4	Q07351	490 aa		4.3	□□□□□ -1.72
PRP21	YJL203W	LEU2	P04173	364 aa	Predicted RBP	4.29	□□□□□ -1.72
PRP21	YJL203W	PIP2	P52960	996 aa		4.29	□□□□□ -1.72
PRP21	YJL203W	UTP14	Q04500	899 aa	Known RBP	4.29	□□□□□ -1.72
PRP21	YJL203W	AI5_ALPHA	Q9ZZX1	630 aa		4.29	□□□□□ -1.72
PRP21	YJL203W	TDA3	P38758	523 aa		4.28	□□□□□ -1.72
PRP21	YJL203W	CKB2	P38930	258 aa		4.28	□□□□□ -1.72
PRP21	YJL203W	YJR096W	P47137	282 aa		4.28	□□□□□ -1.72
PRP21	YJL203W	HLJ1	P48353	224 aa		4.28	□□□□□ -1.72
PRP21	YJL203W	RGT2	Q12300	763 aa		4.28	□□□□□ -1.72
PRP21	YJL203W	PRE4	P30657	266 aa		4.27	□□□□□ -1.73
PRP21	YJL203W	THI6	P41835	540 aa		4.27	□□□□□ -1.73
PRP21	YJL203W	SPO1	P53541	631 aa		4.27	□□□□□ -1.73
PRP21	YJL203W	NOP15	P53927	220 aa	Predicted RBP	4.27	□□□□□ -1.73
PRP21	YJL203W	RPS17A	P02407	136 aa	Known RBP	4.26	□□□□□ -1.73
PRP21	YJL203W	RPS17B	P14127	136 aa	Known RBP	4.26	□□□□□ -1.73
PRP21	YJL203W	PMA2	P19657	947 aa		4.26	□□□□□ -1.73
PRP21	YJL203W	PRP19	P32523	503 aa	Known RBP	4.26	□□□□□ -1.73
PRP21	YJL203W	CDS1	P38221	457 aa		4.26	□□□□□ -1.73
PRP21	YJL203W	PPE1	P38796	400 aa		4.26	□□□□□ -1.73
PRP21	YJL203W	CRG1	P38892	291 aa	RIP-Chip data	4.26	□□□□□ -1.73	not detected
PRP21	YJL203W	YIP4	P53093	235 aa		4.26	□□□□□ -1.73
PRP21	YJL203W	FDC1	Q03034	503 aa		4.26	□□□□□ -1.73
PRP21	YJL203W	THI73	Q07904	523 aa		4.26	□□□□□ -1.73
PRP21	YJL203W	ZPS1	Q12512	249 aa		4.26	□□□□□ -1.73
PRP21	YJL203W	RPS21B	Q3E754	87 aa	Known RBP	4.26	□□□□□ -1.73
PRP21	YJL203W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
PRP21	YJL203W	MRPL7	P36519	292 aa		4.25	□□□□□ -1.73
PRP21	YJL203W	FTR1	P40088	404 aa		4.25	□□□□□ -1.73
PRP21	YJL203W	YJR142W	P47173	342 aa		4.25	□□□□□ -1.73
PRP21	YJL203W	TIM50	Q02776	476 aa		4.25	□□□□□ -1.73
PRP21	YJL203W	EFR3	Q03653	782 aa	Known RBP	4.25	□□□□□ -1.73
PRP21	YJL203W	PPN1	Q04119	674 aa		4.25	□□□□□ -1.73
PRP21	YJL203W	TUP1	P16649	713 aa		4.24	□□□□□ -1.73
PRP21	YJL203W	CNE1	P27825	502 aa		4.24	□□□□□ -1.73
PRP21	YJL203W	TYS1	P36421	394 aa	Known RBP	4.24	□□□□□ -1.73
PRP21	YJL203W	RIM4	P38741	713 aa		4.24	□□□□□ -1.73
PRP21	YJL203W	PIH1	P38768	344 aa		4.24	□□□□□ -1.73
PRP21	YJL203W	HXT6	P39003	570 aa	Known RBP	4.24	□□□□□ -1.73
PRP21	YJL203W	HXT7	P39004	570 aa		4.24	□□□□□ -1.73
PRP21	YJL203W	ULP2	P40537	1034 aa	Predicted RBP	4.24	□□□□□ -1.73
PRP21	YJL203W	IES1	P43579	692 aa		4.24	□□□□□ -1.73
PRP21	YJL203W	YGR153W	P48238	217 aa		4.24	□□□□□ -1.73
PRP21	YJL203W	TAF4	P50105	388 aa		4.24	□□□□□ -1.73
PRP21	YJL203W	YGR054W	P53235	642 aa	Known RBP	4.24	□□□□□ -1.73
PRP21	YJL203W	MTQ2	Q03920	221 aa	Predicted RBP	4.24	□□□□□ -1.73
PRP21	YJL203W	CPA2	P03965	1118 aa	Known RBP	4.23	□□□□□ -1.73
PRP21	YJL203W	RPL7A	P05737	244 aa	Known RBP	4.23	□□□□□ -1.73
PRP21	YJL203W	YNL018C	P53976	612 aa		4.23	□□□□□ -1.73
PRP21	YJL203W	MFM1	Q02783	413 aa		4.23	□□□□□ -1.73
PRP21	YJL203W	CEF1	Q03654	590 aa	Predicted RBP	4.23	□□□□□ -1.73
PRP21	YJL203W	RPL7B	Q12213	244 aa	Known RBP	4.23	□□□□□ -1.73
PRP21	YJL203W	FRE7	Q12333	620 aa		4.23	□□□□□ -1.73
PRP21	YJL203W	SEC65	P29478	273 aa		4.22	□□□□□ -1.73
PRP21	YJL203W	DUN1	P39009	513 aa		4.22	□□□□□ -1.73
PRP21	YJL203W	PMT3	P47190	753 aa		4.22	□□□□□ -1.73
PRP21	YJL203W	YNR029C	P53729	429 aa	Known RBP	4.22	□□□□□ -1.73
PRP21	YJL203W	MPS1	P54199	764 aa		4.22	□□□□□ -1.73
PRP21	YJL203W	NSE5	Q03718	556 aa		4.22	□□□□□ -1.73
PRP21	YJL203W	HLR1	Q04429	423 aa		4.22	□□□□□ -1.73
PRP21	YJL203W	YGR161W-C	Q3E744	92 aa		4.22	□□□□□ -1.73
PRP21	YJL203W	NUP145	P49687	1317 aa		4.21	□□□□□ -1.73
PRP21	YJL203W	AQY1	P0CD91	305 aa		4.21	□□□□□ -1.74
PRP21	YJL203W	GLN4	P13188	809 aa	Known RBP	4.21	□□□□□ -1.74
PRP21	YJL203W	FPR3	P38911	411 aa	Known RBP	4.21	□□□□□ -1.74
PRP21	YJL203W	PRM2	P40534	656 aa		4.21	□□□□□ -1.74
PRP21	YJL203W	PSA1	P41940	361 aa	Known RBP	4.21	□□□□□ -1.74
PRP21	YJL203W	GZF3	P42944	551 aa	Known RBP	4.21	□□□□□ -1.74
PRP21	YJL203W	COQ6	P53318	479 aa		4.21	□□□□□ -1.74
PRP21	YJL203W	BUD17	P53727	317 aa		4.21	□□□□□ -1.74
PRP21	YJL203W	STP1	Q00947	519 aa		4.21	□□□□□ -1.74
PRP21	YJL203W	ECM9	Q02202	377 aa		4.21	□□□□□ -1.74
PRP21	YJL203W	UME1	Q03010	460 aa		4.21	□□□□□ -1.74
PRP21	YJL203W	YDL073W	Q07454	984 aa		4.21	□□□□□ -1.74
PRP21	YJL203W	CIR2	Q08822	631 aa		4.21	□□□□□ -1.74
PRP21	YJL203W	MTC7	P32633	139 aa		4.2	□□□□□ -1.74
PRP21	YJL203W	ATP23	P53722	227 aa		4.2	□□□□□ -1.74
PRP21	YJL203W	ORM2	Q06144	216 aa		4.2	□□□□□ -1.74
PRP21	YJL203W	GEP3	Q08622	556 aa		4.2	□□□□□ -1.74
PRP21	YJL203W	YTM1	Q12024	460 aa	Predicted RBP	4.2	□□□□□ -1.74
PRP21	YJL203W	HEM1	P09950	548 aa	Predicted RBP	4.19	□□□□□ -1.74
PRP21	YJL203W	WHI2	P12611	486 aa		4.19	□□□□□ -1.74
PRP21	YJL203W	BEM3	P32873	1128 aa		4.19	□□□□□ -1.74
PRP21	YJL203W	OAF3	P36023	863 aa		4.19	□□□□□ -1.74
PRP21	YJL203W	FAT1	P38225	669 aa		4.19	□□□□□ -1.74
PRP21	YJL203W	BPL1	P48445	690 aa	Predicted RBP	4.19	□□□□□ -1.74
PRP21	YJL203W	GPG1	P53130	126 aa		4.19	□□□□□ -1.74
PRP21	YJL203W	RPS15	Q01855	142 aa	Known RBP	4.19	□□□□□ -1.74
PRP21	YJL203W	YHM2	Q04013	314 aa		4.19	□□□□□ -1.74
PRP21	YJL203W	YPL216W	Q08964	1102 aa		4.19	□□□□□ -1.74
PRP21	YJL203W	HFI1	Q12060	488 aa		4.19	□□□□□ -1.74
PRP21	YJL203W	CDC26	P14724	124 aa		4.18	□□□□□ -1.74
PRP21	YJL203W	HOP1	P20050	605 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 98.4 ms