RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C NMD5P46970 1048 aa8.16□□□□□ -1.1
PUP3YER094C ATG36P46983 293 aa8.16□□□□□ -1.1
PUP3YER094C YGR283CP53336 341 aaPredicted RBP8.16□□□□□ -1.1
PUP3YER094C YNL108CP53929 270 aa8.16□□□□□ -1.1
PUP3YER094C CDC55Q00362 526 aa8.16□□□□□ -1.1
PUP3YER094C ADA2Q02336 434 aa8.16□□□□□ -1.1
PUP3YER094C PNG1Q02890 363 aa8.16□□□□□ -1.1
PUP3YER094C EMI2Q04409 500 aaKnown RBP8.16□□□□□ -1.1
PUP3YER094C CIR2Q08822 631 aa8.16□□□□□ -1.1
PUP3YER094C LEA1Q08963 238 aaPredicted RBP8.16□□□□□ -1.1
PUP3YER094C THI21Q08975 551 aa8.16□□□□□ -1.1
PUP3YER094C YDR018CQ12185 396 aa8.16□□□□□ -1.1
PUP3YER094C APM4Q99186 491 aa8.16□□□□□ -1.1
PUP3YER094C RAD10P06838 210 aa8.15□□□□□ -1.1
PUP3YER094C MAS1P10507 462 aa8.15□□□□□ -1.1
PUP3YER094C YPK1P12688 680 aaKnown RBP8.15□□□□□ -1.1
PUP3YER094C SPO16P17122 198 aa8.15□□□□□ -1.1
PUP3YER094C SLY1P22213 666 aa8.15□□□□□ -1.1
PUP3YER094C PUF4P25339 888 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
PUP3YER094C MEI4P29467 408 aa8.15□□□□□ -1.1
PUP3YER094C MET4P32389 672 aa8.15□□□□□ -1.1
PUP3YER094C LAS1P36146 502 aaPredicted RBP8.15□□□□□ -1.1
PUP3YER094C YBR056WP38081 501 aa8.15□□□□□ -1.1
PUP3YER094C YBR284WP38150 797 aa8.15□□□□□ -1.1
PUP3YER094C SPP381P38282 291 aaPredicted RBP8.15□□□□□ -1.1
PUP3YER094C SAW1P39735 261 aa8.15□□□□□ -1.1
PUP3YER094C ARG2P40360 574 aa8.15□□□□□ -1.1
PUP3YER094C TMA108P40462 946 aa8.15□□□□□ -1.1
PUP3YER094C YFL052WP43551 465 aa8.15□□□□□ -1.1
PUP3YER094C RGD2P43556 714 aa8.15□□□□□ -1.1
PUP3YER094C MCM6P53091 1017 aaKnown RBP8.15□□□□□ -1.1
PUP3YER094C MET13P53128 600 aa8.15□□□□□ -1.1
PUP3YER094C BET4Q00618 327 aa8.15□□□□□ -1.1
PUP3YER094C THI7Q05998 598 aa8.15□□□□□ -1.1
PUP3YER094C MRI1Q06489 411 aaKnown RBP8.15□□□□□ -1.1
PUP3YER094C MRN1Q08925 612 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
PUP3YER094C PEX2P32800 271 aa8.14□□□□□ -1.11
PUP3YER094C POP4P38336 279 aa8.14□□□□□ -1.11
PUP3YER094C FLC2P39719 783 aa8.14□□□□□ -1.11
PUP3YER094C MKT1P40850 830 aaKnown RBP8.14□□□□□ -1.11
PUP3YER094C CDC1P40986 491 aa8.14□□□□□ -1.11
PUP3YER094C MTD1Q02046 320 aaKnown RBP8.14□□□□□ -1.11
PUP3YER094C HRD3Q05787 833 aa8.14□□□□□ -1.11
PUP3YER094C ACM1Q08981 209 aa8.14□□□□□ -1.11
PUP3YER094C FAP7Q12055 197 aaPredicted RBP8.14□□□□□ -1.11
PUP3YER094C RAD1P06777 1100 aa8.13□□□□□ -1.11
PUP3YER094C GPI10P30777 616 aa8.13□□□□□ -1.11
PUP3YER094C PLC1P32383 869 aa8.13□□□□□ -1.11
PUP3YER094C RPC37P36121 282 aa8.13□□□□□ -1.11
PUP3YER094C RFS1P38234 210 aaKnown RBP8.13□□□□□ -1.11
PUP3YER094C SAP1P39955 897 aaKnown RBP8.13□□□□□ -1.11
PUP3YER094C INA22P40576 216 aa8.13□□□□□ -1.11
PUP3YER094C HLJ1P48353 224 aa8.13□□□□□ -1.11
PUP3YER094C RPL22BP56628 122 aaKnown RBP8.13□□□□□ -1.11
PUP3YER094C YPL062WQ02781 134 aa8.13□□□□□ -1.11
PUP3YER094C HEH2Q03281 663 aa8.13□□□□□ -1.11
PUP3YER094C AAD4Q07747 329 aa8.13□□□□□ -1.11
PUP3YER094C SAM3Q08986 587 aa8.13□□□□□ -1.11
PUP3YER094C MNL2Q12205 849 aa8.13□□□□□ -1.11
PUP3YER094C PAB1P04147 577 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11 RIP-Chip
PUP3YER094C RGR1P19263 1082 aa8.12□□□□□ -1.11
PUP3YER094C PGS1P25578 521 aa8.12□□□□□ -1.11
PUP3YER094C RAD27P26793 382 aa8.12□□□□□ -1.11
PUP3YER094C NMD3P38861 518 aaKnown RBP8.12□□□□□ -1.11
PUP3YER094C SSP1P38871 571 aa8.12□□□□□ -1.11
PUP3YER094C ERP2P39704 215 aa8.12□□□□□ -1.11
PUP3YER094C MMF1P40185 145 aaKnown RBP8.12□□□□□ -1.11
PUP3YER094C PRK1P40494 810 aa8.12□□□□□ -1.11
PUP3YER094C YIR016WP40572 265 aa8.12□□□□□ -1.11
PUP3YER094C VPS25P47142 202 aa8.12□□□□□ -1.11
PUP3YER094C PEX31P53203 462 aa8.12□□□□□ -1.11
PUP3YER094C INA17Q02888 182 aa8.12□□□□□ -1.11
PUP3YER094C SPG3Q04398 127 aaPredicted RBP8.12□□□□□ -1.11
PUP3YER094C TPO1Q07824 586 aa8.12□□□□□ -1.11
PUP3YER094C ARP7Q12406 477 aa8.12□□□□□ -1.11
PUP3YER094C YKL068W-AQ3E826 78 aa8.12□□□□□ -1.11
PUP3YER094C IZH4Q99393 312 aa8.12□□□□□ -1.11
PUP3YER094C ECM32P32644 1121 aaKnown RBP8.11□□□□□ -1.11
PUP3YER094C MAC1P35192 417 aa8.11□□□□□ -1.11
PUP3YER094C YBR053CP38235 358 aa8.11□□□□□ -1.11
PUP3YER094C SIF2P38262 535 aa8.11□□□□□ -1.11
PUP3YER094C FMP10P40098 244 aa8.11□□□□□ -1.11
PUP3YER094C FAF1P40546 346 aaPredicted RBP8.11□□□□□ -1.11
PUP3YER094C MVP1P40959 511 aaKnown RBP8.11□□□□□ -1.11
PUP3YER094C ALY2P47029 1046 aa8.11□□□□□ -1.11
PUP3YER094C YJR039WP47107 1121 aa8.11□□□□□ -1.11
PUP3YER094C CPR6P53691 371 aaKnown RBP8.11□□□□□ -1.11
PUP3YER094C KTR6P54070 446 aa8.11□□□□□ -1.11
PUP3YER094C SND1Q04007 877 aa8.11□□□□□ -1.11
PUP3YER094C YDL073WQ07454 984 aa8.11□□□□□ -1.11
PUP3YER094C YLL056CQ12177 298 aa8.11□□□□□ -1.11
PUP3YER094C RUD3Q12234 484 aaKnown RBP8.11□□□□□ -1.11
PUP3YER094C AHC1Q12433 566 aa8.11□□□□□ -1.11
PUP3YER094C GCR1P07261 785 aa8.1□□□□□ -1.11
PUP3YER094C MGT1P26188 188 aa8.1□□□□□ -1.11
PUP3YER094C DAL1P32375 460 aa8.1□□□□□ -1.11
PUP3YER094C HXT3P32466 567 aaKnown RBP8.1□□□□□ -1.11
PUP3YER094C DSS4P32601 143 aa8.1□□□□□ -1.11
PUP3YER094C CDC27P38042 758 aa8.1□□□□□ -1.11
PUP3YER094C RIM4P38741 713 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms