RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CNNM2Q9H8M5 875 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 RAI14Q9P0K7 980 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 SUGT1Q9Y2Z0 365 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 ATP6V0A2Q9Y487 856 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 KIF3AQ9Y496 699 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 IRS2Q9Y4H2 1338 aa11.53□□□□□ -0.56
PHGDH-215ENST00000641371 FGAP02671 866 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 LDHCP07864 332 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 PDCP20941 246 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 CYP7A1P22680 504 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 FGD1P98174 961 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 EZH2Q15910 746 aaKnown RBP11.52□□□□□ -0.57
PHGDH-215ENST00000641371 NAA16Q6N069 864 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-215ENST00000641371 TDRD7Q8NHU6 1098 aaKnown RBP11.52□□□□□ -0.57
PHGDH-215ENST00000641371 NCOA7Q8NI08 942 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 CNKSR1Q969H4 720 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 EYA3Q99504 573 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 AGXT2Q9BYV1 514 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 NAPBQ9H115 298 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 ABCF2Q9UG63 623 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 CHD4Q14839 1912 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 LTBP1Q14766 1721 aa11.52□□□□□ -0.57
PHGDH-215ENST00000641371 CACNA1SQ13698 1873 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 MAGEB6P1A0A0J9YX57 407 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 E7EWF7 191 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 H0YIN7 160 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 UFL1O94874 794 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 IL1R1P14778 569 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 MCM5P33992 734 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 EN1Q05925 392 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-215ENST00000641371 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 COA1Q9GZY4 146 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 NSFL1CQ9UNZ2 370 aaKnown RBP11.51□□□□□ -0.57
PHGDH-215ENST00000641371 SMC3Q9UQE7 1217 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 TIAM2Q8IVF5 1701 aa11.51□□□□□ -0.57
PHGDH-215ENST00000641371 SNAP23O00161 211 aa11.5□□□□□ -0.57
PHGDH-215ENST00000641371 MBD4O95243 580 aa11.5□□□□□ -0.57
PHGDH-215ENST00000641371 APPP05067 770 aa11.5□□□□□ -0.57
PHGDH-215ENST00000641371 GPSM2P81274 684 aa11.5□□□□□ -0.57
PHGDH-215ENST00000641371 LLPHQ9BRT6 129 aaKnown RBP11.5□□□□□ -0.57
PHGDH-215ENST00000641371 NOL10Q9BSC4 688 aaKnown RBP11.5□□□□□ -0.57
PHGDH-215ENST00000641371 KRT23Q9C075 422 aa11.5□□□□□ -0.57
PHGDH-215ENST00000641371 ATP6V1DQ9Y5K8 247 aa11.5□□□□□ -0.57
PHGDH-215ENST00000641371 WDR33Q9C0J8 1336 aaKnown RBP11.5□□□□□ -0.57
PHGDH-215ENST00000641371 COL1A1P02452 1464 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-215ENST00000641371 DHX16O60231 1041 aaKnown RBP11.49□□□□□ -0.57
PHGDH-215ENST00000641371 BAG3O95817 575 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 LDHBP07195 334 aaKnown RBP11.49□□□□□ -0.57
PHGDH-215ENST00000641371 PLCG2P16885 1265 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 TDO2P48775 406 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 EXOSC10Q01780 885 aaKnown RBP11.49□□□□□ -0.57
PHGDH-215ENST00000641371 DZIP1Q86YF9 867 aaKnown RBP11.49□□□□□ -0.57
PHGDH-215ENST00000641371 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 MPNDQ8N594 471 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 RGS22Q8NE09 1264 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 SUPT20HQ8NEM7 779 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 TBC1D16Q8TBP0 767 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 NSUN4Q96CB9 384 aaKnown RBP11.49□□□□□ -0.57
PHGDH-215ENST00000641371 ZNF274Q96GC6 653 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-215ENST00000641371 TMEM87BQ96K49 555 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 CRNKL1Q9BZJ0 848 aaKnown RBP11.49□□□□□ -0.57
PHGDH-215ENST00000641371 CD209Q9NNX6 404 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 ATP8A2Q9NTI2 1148 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 SLC4A4Q9Y6R1 1079 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 FAM205AQ6ZU69 1335 aa11.49□□□□□ -0.57
PHGDH-215ENST00000641371 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-215ENST00000641371 SLC3A2P08195 630 aaKnown RBP11.48□□□□□ -0.57
PHGDH-215ENST00000641371 MCM4P33991 863 aa11.48□□□□□ -0.57
PHGDH-215ENST00000641371 EVCP57679 992 aa11.48□□□□□ -0.57
PHGDH-215ENST00000641371 HMGN5P82970 282 aaKnown RBP11.48□□□□□ -0.57
PHGDH-215ENST00000641371 SART3Q15020 963 aaKnown RBP11.48□□□□□ -0.57
PHGDH-215ENST00000641371 SKOR2Q2VWA4 1001 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-215ENST00000641371 C2CD5Q86YS7 1000 aa11.48□□□□□ -0.57
PHGDH-215ENST00000641371 AMOTL1Q8IY63 956 aa11.48□□□□□ -0.57
PHGDH-215ENST00000641371 ZC3H12CQ9C0D7 883 aaKnown RBP11.48□□□□□ -0.57
PHGDH-215ENST00000641371 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-215ENST00000641371 ANAPC4Q9UJX5 808 aa11.48□□□□□ -0.57
PHGDH-215ENST00000641371 DLEC1Q9Y238 1755 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 GSG1L2A8MUP6 293 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 FOXP2O15409 715 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 CHGBP05060 677 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 FKBP1AP62942 108 aaKnown RBP11.47□□□□□ -0.57
PHGDH-215ENST00000641371 CHAF1AQ13111 956 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-215ENST00000641371 TOB2Q14106 344 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-215ENST00000641371 NBR1Q14596 966 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 DPP8Q6V1X1 898 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-215ENST00000641371 Q6ZUG5 572 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 MB21D2Q8IYB1 491 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-215ENST00000641371 TMTC2Q8N394 836 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 STAG1Q8WVM7 1258 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 TNPO1Q92973 898 aaKnown RBP11.47□□□□□ -0.57
PHGDH-215ENST00000641371 RIOK1Q9BRS2 568 aaKnown RBP11.47□□□□□ -0.57
PHGDH-215ENST00000641371 ARMT1Q9H993 441 aa11.47□□□□□ -0.57
PHGDH-215ENST00000641371 C10orf71Q711Q0 1435 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 PFKFB2O60825 505 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 BRD1O95696 1058 aa11.46□□□□□ -0.57
PHGDH-215ENST00000641371 RCAN1P53805 252 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms