RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 BBOX1O75936 387 aa20.42■□□□□ 0.86
PHGDH-208ENST00000641023 PDCP20941 246 aa20.42■□□□□ 0.86
PHGDH-208ENST00000641023 COL1A1P02452 1464 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-208ENST00000641023 ZSCAN22P10073 491 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-208ENST00000641023 CHMP4CQ96CF2 233 aa20.42■□□□□ 0.86
PHGDH-208ENST00000641023 LAMA4Q16363 1823 aa20.42■□□□□ 0.86
PHGDH-208ENST00000641023 KLRG2A4D1S0 409 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-208ENST00000641023 HOXA10P31260 410 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-208ENST00000641023 MB21D2Q8IYB1 491 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-208ENST00000641023 LCORLQ8N3X6 602 aa20.41■□□□□ 0.86
PHGDH-208ENST00000641023 ATP6V1DQ9Y5K8 247 aa20.41■□□□□ 0.86
PHGDH-208ENST00000641023 SLC4A4Q9Y6R1 1079 aa20.41■□□□□ 0.86
PHGDH-208ENST00000641023 PFKFB2O60825 505 aa20.41■□□□□ 0.86
PHGDH-208ENST00000641023 LARP1BQ659C4 914 aaKnown RBP20.41■□□□□ 0.86
PHGDH-208ENST00000641023 CHST3Q7LGC8 479 aa20.41■□□□□ 0.86
PHGDH-208ENST00000641023 MIGA1Q8NAN2 632 aa20.41■□□□□ 0.86
PHGDH-208ENST00000641023 ZNF274Q96GC6 653 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-208ENST00000641023 WDR19Q8NEZ3 1342 aa20.4■□□□□ 0.86
PHGDH-208ENST00000641023 GSG1L2A8MUP6 293 aa20.4■□□□□ 0.86
PHGDH-208ENST00000641023 APOBRQ0VD83 1088 aa20.4■□□□□ 0.86
PHGDH-208ENST00000641023 NAA16Q6N069 864 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-208ENST00000641023 TMED8Q6PL24 325 aaPredicted RBP20.4■□□□□ 0.86
PHGDH-208ENST00000641023 TXNRD3Q86VQ6 643 aa20.4■□□□□ 0.86
PHGDH-208ENST00000641023 CRAMP1Q96RY5 1269 aa20.4■□□□□ 0.86
PHGDH-208ENST00000641023 IRS2Q9Y4H2 1338 aa20.4■□□□□ 0.86
PHGDH-208ENST00000641023 MAGEB6P1A0A0J9YX57 407 aa20.39■□□□□ 0.86
PHGDH-208ENST00000641023 PRC1O43663 620 aa20.39■□□□□ 0.86
PHGDH-208ENST00000641023 EPB41L4AQ9HCS5 686 aaPredicted RBP20.39■□□□□ 0.86
PHGDH-208ENST00000641023 NSFL1CQ9UNZ2 370 aaKnown RBP20.39■□□□□ 0.86
PHGDH-208ENST00000641023 DDX49Q9Y6V7 483 aaKnown RBP20.39■□□□□ 0.86
PHGDH-208ENST00000641023 TDO2P48775 406 aa20.39■□□□□ 0.85
PHGDH-208ENST00000641023 LLPHQ9BRT6 129 aaKnown RBP20.39■□□□□ 0.85
PHGDH-208ENST00000641023 BRIP1Q9BX63 1249 aa20.39■□□□□ 0.85
PHGDH-208ENST00000641023 LMBRD1Q9NUN5 540 aa20.39■□□□□ 0.85
PHGDH-208ENST00000641023 RGS17Q9UGC6 210 aaPredicted RBP20.39■□□□□ 0.85
PHGDH-208ENST00000641023 PRPF40AO75400 957 aaKnown RBP20.38■□□□□ 0.85
PHGDH-208ENST00000641023 EVCP57679 992 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 SCRN1Q12765 414 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 KLHL40Q2TBA0 621 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 C15orf52Q6ZUT6 534 aaKnown RBP20.38■□□□□ 0.85
PHGDH-208ENST00000641023 TMC4Q7Z404 712 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 ZNF804AQ7Z570 1209 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 ADGRA1Q86SQ6 560 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 GZF1Q9H116 711 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-208ENST00000641023 PRKAB2O43741 272 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 IGSF3O75054 1194 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 F13A1P00488 732 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 ATP2B4P23634 1241 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 CHAF1AQ13111 956 aaPredicted RBP20.38■□□□□ 0.85
PHGDH-208ENST00000641023 TBC1D10CQ8IV04 446 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 NBPF3Q9H094 633 aa20.38■□□□□ 0.85
PHGDH-208ENST00000641023 GPSM2P81274 684 aa20.37■□□□□ 0.85
PHGDH-208ENST00000641023 SPTY2D1Q68D10 685 aaPredicted RBP20.37■□□□□ 0.85
PHGDH-208ENST00000641023 NSUN4Q96CB9 384 aaKnown RBP20.37■□□□□ 0.85
PHGDH-208ENST00000641023 MTMR6Q9Y217 621 aa20.37■□□□□ 0.85
PHGDH-208ENST00000641023 PDIA3P30101 505 aaKnown RBP20.36■□□□□ 0.85
PHGDH-208ENST00000641023 POTEAQ6S8J7 498 aa20.36■□□□□ 0.85
PHGDH-208ENST00000641023 RIOK1Q9BRS2 568 aaKnown RBP20.36■□□□□ 0.85
PHGDH-208ENST00000641023 GGA1Q9UJY5 639 aa20.36■□□□□ 0.85
PHGDH-208ENST00000641023 NAP1L2Q9ULW6 460 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-208ENST00000641023 VPS37CA5D8V6 355 aaPredicted RBP20.36■□□□□ 0.85
PHGDH-208ENST00000641023 WDR66Q8TBY9 1149 aa20.36■□□□□ 0.85
PHGDH-208ENST00000641023 CNNM2Q9H8M5 875 aa20.36■□□□□ 0.85
PHGDH-208ENST00000641023 PARP3Q9Y6F1 533 aa20.36■□□□□ 0.85
PHGDH-208ENST00000641023 ANTXR2P58335 489 aa20.35■□□□□ 0.85
PHGDH-208ENST00000641023 MECOMQ03112 1051 aa20.35■□□□□ 0.85
PHGDH-208ENST00000641023 TDRD7Q8NHU6 1098 aaKnown RBP20.35■□□□□ 0.85
PHGDH-208ENST00000641023 PODXL2Q9NZ53 605 aa20.35■□□□□ 0.85
PHGDH-208ENST00000641023 SALL1Q9NSC2 1324 aa20.35■□□□□ 0.85
PHGDH-208ENST00000641023 DTNBO60941 627 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 UFL1O94874 794 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 HMGN5P82970 282 aaKnown RBP20.34■□□□□ 0.85
PHGDH-208ENST00000641023 MFSD6Q6ZSS7 791 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 SMARCC2Q8TAQ2 1214 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 CHAMP1Q96JM3 812 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 KIF3AQ9Y496 699 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 CACNA1SQ13698 1873 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 MMP10P09238 476 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 CCT2P78371 535 aaKnown RBP20.34■□□□□ 0.85
PHGDH-208ENST00000641023 FOXD4L6Q3SYB3 417 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-208ENST00000641023 AKNAD1Q5T1N1 836 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 FOXD4L3Q6VB84 417 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-208ENST00000641023 FAM184AQ8NB25 1140 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 KRT23Q9C075 422 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 MYH13Q9UKX3 1938 aa20.34■□□□□ 0.85
PHGDH-208ENST00000641023 DHX16O60231 1041 aaKnown RBP20.33■□□□□ 0.85
PHGDH-208ENST00000641023 PRDX5P30044 214 aa20.33■□□□□ 0.85
PHGDH-208ENST00000641023 PDE6BP35913 854 aa20.33■□□□□ 0.85
PHGDH-208ENST00000641023 ZNF384Q8TF68 577 aa20.33■□□□□ 0.85
PHGDH-208ENST00000641023 TMEM87BQ96K49 555 aa20.33■□□□□ 0.85
PHGDH-208ENST00000641023 RNF41Q9H4P4 317 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-208ENST00000641023 ANGEL1Q9UNK9 670 aaKnown RBP20.33■□□□□ 0.85
PHGDH-208ENST00000641023 B4E1Z4 1266 aa20.33■□□□□ 0.84
PHGDH-208ENST00000641023 JAK2O60674 1132 aa20.33■□□□□ 0.84
PHGDH-208ENST00000641023 CTDSPL2Q05D32 466 aa20.33■□□□□ 0.84
PHGDH-208ENST00000641023 SLC51AQ86UW1 340 aa20.33■□□□□ 0.84
PHGDH-208ENST00000641023 SP8Q8IXZ3 490 aa20.33■□□□□ 0.84
PHGDH-208ENST00000641023 SDR42E1Q8WUS8 393 aa20.33■□□□□ 0.84
PHGDH-208ENST00000641023 RGPD3A6NKT7 1758 aaPredicted RBP20.33■□□□□ 0.84
PHGDH-208ENST00000641023 RGPD4Q7Z3J3 1758 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms