RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 HCN2Q9UL51 889 aa9.45□□□□□ -0.9
SCARB2-224ENST00000640880 PCDHB5Q9Y5E4 795 aa9.45□□□□□ -0.9
SCARB2-224ENST00000640880 FAM187AA6NFU0 413 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 BNIP3LO60238 219 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 CD33P20138 364 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 IBSPP21815 317 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-224ENST00000640880 ZNF157P51786 506 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-224ENST00000640880 IGBP1P78318 339 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 FBXW10Q5XX13 1052 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 CELF2-AS1Q8N7Q2 184 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 FERD3LQ96RJ6 166 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 MIR1-1HGQ9H1L0 117 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 RASSF4Q9H2L5 321 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 TMEM39AQ9NV64 488 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 ABCA10Q8WWZ4 1543 aa9.44□□□□□ -0.9
SCARB2-224ENST00000640880 ZNF608Q9ULD9 1512 aaPredicted RBP9.44□□□□□ -0.9
SCARB2-224ENST00000640880 MAN1A2O60476 641 aa9.43□□□□□ -0.9
SCARB2-224ENST00000640880 CHMP4BP1P59074 171 aa9.43□□□□□ -0.9
SCARB2-224ENST00000640880 ATP11AP98196 1134 aa9.43□□□□□ -0.9
SCARB2-224ENST00000640880 MLLT1Q03111 559 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-224ENST00000640880 CCDC84Q86UT8 332 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-224ENST00000640880 GATAD2BQ8WXI9 593 aa9.43□□□□□ -0.9
SCARB2-224ENST00000640880 ABHD17AQ96GS6 310 aa9.43□□□□□ -0.9
SCARB2-224ENST00000640880 CRBNQ96SW2 442 aa9.43□□□□□ -0.9
SCARB2-224ENST00000640880 LOC102724428A0A0B4J2F2 783 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 J3QW42 95 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 AVPP01185 164 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 SIK1P57059 783 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 PPP2R3AQ06190 1150 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 MPP2Q14168 576 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
SCARB2-224ENST00000640880 SH3TC2Q8TF17 1288 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 PLD4Q96BZ4 506 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 PBX4Q9BYU1 374 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 MUC3BQ9H195 1237 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 NDFIP2Q9NV92 336 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 ACTR10Q9NZ32 417 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 SAMM50Q9Y512 469 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
SCARB2-224ENST00000640880 GAPVD1Q14C86 1478 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 FAM221AA4D161 298 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 H7C1W4 665 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 RAB11FIP3O75154 756 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 GIPRP48546 466 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 ZNF165P49910 485 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 GPLD1P80108 840 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 SEPT6Q14141 434 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 PLEKHG4Q58EX7 1191 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 RASIP1Q5U651 963 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 HFE2Q6ZVN8 426 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 FILIP1Q7Z7B0 1213 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 ZCRB1Q8TBF4 217 aaKnown RBP9.41□□□□□ -0.9
SCARB2-224ENST00000640880 CCDC113Q9H0I3 377 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 ST7Q9NRC1 585 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 PDZRN3Q9UPQ7 1066 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 MSRB2Q9Y3D2 182 aa9.41□□□□□ -0.9
SCARB2-224ENST00000640880 AQRO60306 1485 aaKnown RBP eCLIP9.4□□□□□ -0.9
SCARB2-224ENST00000640880 TDRD9Q8NDG6 1382 aaKnown RBP9.4□□□□□ -0.9
SCARB2-224ENST00000640880 CDC45O75419 566 aa9.4□□□□□ -0.9
SCARB2-224ENST00000640880 ANAPC15P60006 121 aa9.4□□□□□ -0.9
SCARB2-224ENST00000640880 NEUROD1Q13562 356 aa9.4□□□□□ -0.9
SCARB2-224ENST00000640880 DDR2Q16832 855 aa9.4□□□□□ -0.9
SCARB2-224ENST00000640880 TRPM4Q8TD43 1214 aa9.4□□□□□ -0.9
SCARB2-224ENST00000640880 DNAJC7Q99615 494 aa9.4□□□□□ -0.9
SCARB2-224ENST00000640880 CLEC4MQ9H2X3 399 aaPredicted RBP9.4□□□□□ -0.9
SCARB2-224ENST00000640880 KANSL2Q9H9L4 492 aa9.4□□□□□ -0.9
SCARB2-224ENST00000640880 FANCLQ9NW38 375 aa9.4□□□□□ -0.9
SCARB2-224ENST00000640880 GRIN2BQ13224 1484 aa9.4□□□□□ -0.91
SCARB2-224ENST00000640880 CHD1O14646 1710 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 ZBTB42B2RXF5 422 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 TRIM37O94972 964 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 GHRHP01286 108 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 BMP6P22004 513 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 IFRD2Q12894 506 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-224ENST00000640880 DBN1Q16643 649 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 DIEXFQ68CQ4 756 aaKnown RBP9.39□□□□□ -0.91
SCARB2-224ENST00000640880 Q6ZNB5 142 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 GK5Q6ZS86 529 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 BRINP2Q9C0B6 783 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 IGFLR1Q9H665 355 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 CWC22Q9HCG8 908 aaKnown RBP9.39□□□□□ -0.91
SCARB2-224ENST00000640880 BRMS1Q9HCU9 246 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 IFT57Q9NWB7 429 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
SCARB2-224ENST00000640880 COL4A3BPQ9Y5P4 624 aa9.39□□□□□ -0.91
SCARB2-224ENST00000640880 CILPO75339 1184 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 BPNT1O95861 308 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 NME2P22392 152 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 PTSQ03393 145 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 REC114Q7Z4M0 266 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 LILRB2Q8N423 598 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 OR6P1Q8NGX9 317 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 MICAL1Q8TDZ2 1067 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 BSNDQ8WZ55 320 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 POP1Q99575 1024 aaKnown RBP9.38□□□□□ -0.91
SCARB2-224ENST00000640880 RBSNQ9H1K0 784 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 ZNRF3Q9ULT6 936 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 CYP8B1Q9UNU6 501 aa9.38□□□□□ -0.91
SCARB2-224ENST00000640880 MAPK8IP1Q9UQF2 711 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms