RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, human

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-222	ENST00000640634	RBM26	Q5T8P6	1007 aa	Known RBP	13.4	□□□□□ -0.26
SCARB2-222	ENST00000640634	SPATA5	Q8NB90	893 aa		13.4	□□□□□ -0.26
SCARB2-222	ENST00000640634	EDC3	Q96F86	508 aa	Known RBP	13.4	□□□□□ -0.26
SCARB2-222	ENST00000640634	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.4	□□□□□ -0.26
SCARB2-222	ENST00000640634	SCN4A	P35499	1836 aa		13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	EPHX2	P34913	555 aa		13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	ZAP70	P43403	619 aa		13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	HIRA	P54198	1017 aa	Predicted RBP	13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	CCDC158	Q5M9N0	1113 aa		13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	ANTXR1	Q9H6X2	564 aa		13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	GNL3L	Q9NVN8	582 aa	Known RBP	13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	HACL1	Q9UJ83	578 aa		13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	MTMR7	Q9Y216	660 aa		13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	EAPP	Q56P03	285 aa	Predicted RBP	13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	DENND2A	Q9ULE3	1009 aa		13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	SCAF8	Q9UPN6	1271 aa	Known RBP	13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	SALL3	Q9BXA9	1300 aa		13.39	□□□□□ -0.27
SCARB2-222	ENST00000640634	CYP2E1	P05181	493 aa	Predicted RBP	13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	USP17L8	P0C7I0	530 aa		13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	VEGFA	P15692	232 aa	Predicted RBP	13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	LMOD1	P29536	600 aa	Predicted RBP	13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	NUCB1	Q02818	461 aa		13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	DIXDC1	Q155Q3	683 aa		13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	AGBL3	Q8NEM8	1001 aa		13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	ZNF384	Q8TF68	577 aa		13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	DPF2	Q92785	391 aa		13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	PIH1D3	Q9NQM4	214 aa	Known RBP	13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	ABCF2	Q9UG63	623 aa		13.38	□□□□□ -0.27
SCARB2-222	ENST00000640634	SEMA3E	O15041	775 aa		13.37	□□□□□ -0.27
SCARB2-222	ENST00000640634	UQCRFS1P1	P0C7P4	283 aa		13.37	□□□□□ -0.27
SCARB2-222	ENST00000640634	RPS12	P25398	132 aa	Known RBP	13.37	□□□□□ -0.27
SCARB2-222	ENST00000640634	PDE4A	P27815	886 aa		13.37	□□□□□ -0.27
SCARB2-222	ENST00000640634	CHD1L	Q86WJ1	897 aa		13.37	□□□□□ -0.27
SCARB2-222	ENST00000640634	DNAJC2	Q99543	621 aa	Known RBP	13.37	□□□□□ -0.27
SCARB2-222	ENST00000640634	BOLA2	Q9H3K6	86 aa		13.37	□□□□□ -0.27
SCARB2-222	ENST00000640634	TTF2	Q9UNY4	1162 aa	Known RBP	13.37	□□□□□ -0.27
SCARB2-222	ENST00000640634	MYO3B	Q8WXR4	1341 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	MAP4K4	O95819	1239 aa	Predicted RBP	13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	CHGB	P05060	677 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	RBM25	P49756	843 aa	Known RBP	13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	ZNF280A	P59817	542 aa	Predicted RBP	13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	NBPF9	Q3BBW0	867 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	DLK2	Q6UY11	383 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	MYOZ2	Q9NPC6	264 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	IQCA1L	A6NCM1	817 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	KIF4B	Q2VIQ3	1234 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	WDR66	Q8TBY9	1149 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	PI4K2B	Q8TCG2	481 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	ADARB2	Q9NS39	739 aa	Known RBP	13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	ECHDC1	Q9NTX5	307 aa		13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.36	□□□□□ -0.27
SCARB2-222	ENST00000640634	PDS5A	Q29RF7	1337 aa	Known RBP	13.35	□□□□□ -0.27
SCARB2-222	ENST00000640634	SALL1	Q9NSC2	1324 aa		13.35	□□□□□ -0.27
SCARB2-222	ENST00000640634	GOLIM4	O00461	696 aa		13.35	□□□□□ -0.27
SCARB2-222	ENST00000640634	MX1	P20591	662 aa		13.35	□□□□□ -0.27
SCARB2-222	ENST00000640634	FKBP1A	P62942	108 aa	Known RBP	13.35	□□□□□ -0.27
SCARB2-222	ENST00000640634	SLFNL1	Q499Z3	407 aa		13.35	□□□□□ -0.27
SCARB2-222	ENST00000640634	TBC1D22A	Q8WUA7	517 aa		13.35	□□□□□ -0.27
SCARB2-222	ENST00000640634	CCDC136	Q96JN2	1154 aa		13.35	□□□□□ -0.27
SCARB2-222	ENST00000640634	DOCK2	Q92608	1830 aa		13.34	□□□□□ -0.27
SCARB2-222	ENST00000640634		H7C1D1	291 aa		13.34	□□□□□ -0.27
SCARB2-222	ENST00000640634	ATP5J	P18859	108 aa		13.34	□□□□□ -0.27
SCARB2-222	ENST00000640634	CFAP100	Q494V2	611 aa		13.34	□□□□□ -0.27
SCARB2-222	ENST00000640634	WNT10B	O00744	389 aa		13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	LDHB	P07195	334 aa	Known RBP	13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	CRK	P46108	304 aa		13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	MECOM	Q03112	1051 aa		13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	FMR1	Q06787	632 aa	Known RBP eCLIP	13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	MAP1S	Q66K74	1059 aa	Predicted RBP	13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	ADGRA1	Q86SQ6	560 aa		13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	OGFOD1	Q8N543	542 aa		13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	PRMT6	Q96LA8	375 aa	Predicted RBP	13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	TRAIP	Q9BWF2	469 aa		13.33	□□□□□ -0.27
SCARB2-222	ENST00000640634	MAST2	Q6P0Q8	1798 aa		13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	RBM5	P52756	815 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	PDE1A	P54750	535 aa		13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	PLEKHM2	Q8IWE5	1019 aa		13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	KCNV2	Q8TDN2	545 aa		13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	ZBED3	Q96IU2	234 aa	Predicted RBP	13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	HAUS7	Q99871	368 aa		13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	RAI14	Q9P0K7	980 aa		13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	CLEC11A	Q9Y240	323 aa		13.33	□□□□□ -0.28
SCARB2-222	ENST00000640634	CLRN2	A0PK11	232 aa		13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	IDH1	O75874	414 aa	Known RBP	13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	CACNB3	P54284	484 aa		13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	MKRN4P	Q13434	485 aa	Predicted RBP	13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	TMCO4	Q5TGY1	634 aa		13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	USP50	Q70EL3	339 aa	Predicted RBP	13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	DZIP1	Q86YF9	867 aa	Known RBP	13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	NSUN4	Q96CB9	384 aa	Known RBP	13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	PAG1	Q9NWQ8	432 aa		13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	GGA3	Q9NZ52	723 aa		13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	LRP2BP	Q9P2M1	347 aa		13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	DAGLA	Q9Y4D2	1042 aa		13.32	□□□□□ -0.28
SCARB2-222	ENST00000640634	SPDYE2B	A6NHP3	402 aa		13.31	□□□□□ -0.28
SCARB2-222	ENST00000640634	SPDYE6	P0CI01	402 aa		13.31	□□□□□ -0.28
SCARB2-222	ENST00000640634	DLGAP5	Q15398	846 aa		13.31	□□□□□ -0.28

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