RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 MAST2Q6P0Q8 1798 aa9.77□□□□□ -0.85
PNKP-231ENST00000640501 TCRBV5S4A2TA0A5A2 114 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 MBD4O95243 580 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 SLC3A2P08195 630 aaKnown RBP9.76□□□□□ -0.85
PNKP-231ENST00000640501 BCAMP50895 628 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 PI16Q6UXB8 463 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 MFSD6Q6ZSS7 791 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 STOX1Q6ZVD7 989 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 KRT27Q7Z3Y8 459 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 TMC4Q7Z404 712 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 USP48Q86UV5 1035 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 SMARCC2Q8TAQ2 1214 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 TCEANC2Q96MN5 208 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 STRBPQ96SI9 672 aaKnown RBP9.76□□□□□ -0.85
PNKP-231ENST00000640501 ANGEL1Q9UNK9 670 aaKnown RBP9.76□□□□□ -0.85
PNKP-231ENST00000640501 LEMD3Q9Y2U8 911 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 TIAM2Q8IVF5 1701 aa9.76□□□□□ -0.85
PNKP-231ENST00000640501 CCDC88AQ3V6T2 1871 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 MAGEB6P1A0A0J9YX57 407 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 GOLGA8BA8MQT2 603 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 HIBADHP31937 336 aaKnown RBP9.75□□□□□ -0.85
PNKP-231ENST00000640501 HAND2P61296 217 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 GSTO1P78417 241 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 APOBRQ0VD83 1088 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 SCRN1Q12765 414 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 PPP2R5BQ15173 497 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 CCDC183Q5T5S1 534 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 GIMAP6Q6P9H5 292 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 LRSAM1Q6UWE0 723 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 AMOTL1Q8IY63 956 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 MB21D2Q8IYB1 491 aaPredicted RBP9.75□□□□□ -0.85
PNKP-231ENST00000640501 IFNL3Q8IZI9 196 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 WASF1Q92558 559 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 TRIM44Q96DX7 344 aaPredicted RBP9.75□□□□□ -0.85
PNKP-231ENST00000640501 NOL10Q9BSC4 688 aaKnown RBP9.75□□□□□ -0.85
PNKP-231ENST00000640501 TMX4Q9H1E5 349 aaPredicted RBP9.75□□□□□ -0.85
PNKP-231ENST00000640501 BCL2L12Q9HB09 334 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 ABCF2Q9UG63 623 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 WWC3Q9ULE0 1092 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 SLC4A4Q9Y6R1 1079 aa9.75□□□□□ -0.85
PNKP-231ENST00000640501 KLF18A0A0U1RQI7 1052 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 CCDC196A0A1B0GTZ2 297 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 PTPDC1A2A3K4 754 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 CCDC69A6NI79 296 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 FIBPO43427 364 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 CYP7A1P22680 504 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 PDIA3P30101 505 aaKnown RBP9.74□□□□□ -0.85
PNKP-231ENST00000640501 NASPP49321 788 aaPredicted RBP9.74□□□□□ -0.85
PNKP-231ENST00000640501 RCAN1P53805 252 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 CCDC173Q0VFZ6 552 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 GRAPQ13588 217 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 TRIM29Q14134 588 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 AKNAD1Q5T1N1 836 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 NFXL1Q6ZNB6 911 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 ZNF804AQ7Z570 1209 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 NSUN7Q8NE18 718 aaKnown RBP9.74□□□□□ -0.85
PNKP-231ENST00000640501 WDR66Q8TBY9 1149 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 GRAPLQ8TC17 118 aaPredicted RBP9.74□□□□□ -0.85
PNKP-231ENST00000640501 GPT2Q8TD30 523 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 RBM17Q96I25 401 aaKnown RBP9.74□□□□□ -0.85
PNKP-231ENST00000640501 SPATA32Q96LK8 384 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 ANKIB1Q9P2G1 1089 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 SRP68Q9UHB9 627 aaKnown RBP9.74□□□□□ -0.85
PNKP-231ENST00000640501 CNPY2Q9Y2B0 182 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 TAF6LQ9Y6J9 622 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 XDHP47989 1333 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 UBR3Q6ZT12 1888 aa9.74□□□□□ -0.85
PNKP-231ENST00000640501 KIAA1551Q9HCM1 1747 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 MYO5AQ9Y4I1 1855 aaKnown RBP9.73□□□□□ -0.85
PNKP-231ENST00000640501 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.73□□□□□ -0.85
PNKP-231ENST00000640501 CHGBP05060 677 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 XRCC6P12956 609 aaKnown RBP eCLIP9.73□□□□□ -0.85
PNKP-231ENST00000640501 LIFRP42702 1097 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 DNM1Q05193 864 aaKnown RBP9.73□□□□□ -0.85
PNKP-231ENST00000640501 FOXD4L6Q3SYB3 417 aaPredicted RBP9.73□□□□□ -0.85
PNKP-231ENST00000640501 TTLL5Q6EMB2 1281 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 FOXD4L3Q6VB84 417 aaPredicted RBP9.73□□□□□ -0.85
PNKP-231ENST00000640501 BRAPQ7Z569 592 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 FBXO33Q7Z6M2 555 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 STAG1Q8WVM7 1258 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 ESR2Q92731 530 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 CELF1Q92879 486 aaKnown RBP9.73□□□□□ -0.85
PNKP-231ENST00000640501 BRIP1Q9BX63 1249 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 CRNKL1Q9BZJ0 848 aaKnown RBP9.73□□□□□ -0.85
PNKP-231ENST00000640501 TSPY26PQ9H489 355 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 ARMT1Q9H993 441 aa9.73□□□□□ -0.85
PNKP-231ENST00000640501 ZBTB43O43298 467 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 BBOX1O75936 387 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 LDHCP07864 332 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 GYG1P46976 350 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 METAP2P50579 478 aaKnown RBP eCLIP9.72□□□□□ -0.85
PNKP-231ENST00000640501 KCNQ4P56696 695 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 RBM6P78332 1123 aaKnown RBP9.72□□□□□ -0.85
PNKP-231ENST00000640501 ST3GAL1Q11201 340 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 NFIXQ14938 502 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 SLFNL1Q499Z3 407 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 TMEM67Q5HYA8 995 aa9.72□□□□□ -0.85
PNKP-231ENST00000640501 CDC37L1Q7L3B6 337 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms