RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 COL4A1P02462 1669 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 CUL9Q8IWT3 2517 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 WNT10BO00744 389 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 TMEM259Q4ZIN3 620 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 SPRYD7Q5W111 196 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 ANKRD18AQ8IVF6 992 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 COA1Q9GZY4 146 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
MCF2L2-214ENST00000640043 ZNF646O15015 1829 aaPredicted RBP11.83□□□□□ -0.51
MCF2L2-214ENST00000640043 CARNS1A5YM72 827 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 FECHP22830 423 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 MAP3K11Q16584 847 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 NBPF9Q3BBW0 867 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 DACT2Q5SW24 774 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 OTUD7BQ6GQQ9 843 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 MOB2Q70IA6 237 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 ARMC5Q96C12 935 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 ERO1AQ96HE7 468 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 BSDC1Q9NW68 430 aaPredicted RBP11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 PPP2R3BQ9Y5P8 575 aa11.83□□□□□ -0.52
MCF2L2-214ENST00000640043 ECM29Q5VYK3 1845 aa11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 POM121CA8CG34 1229 aa11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 PTPN12Q05209 780 aaKnown RBP11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 OTOP1Q7RTM1 612 aa11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 IFNL1Q8IU54 200 aa11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 UBXN4Q92575 508 aa11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 BCCIPQ9P287 314 aaKnown RBP eCLIP11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 TRIM17Q9Y577 477 aa11.82□□□□□ -0.52
MCF2L2-214ENST00000640043 CLSTN1O94985 981 aa11.81□□□□□ -0.52
MCF2L2-214ENST00000640043 RTL5Q5HYW3 569 aaPredicted RBP11.81□□□□□ -0.52
MCF2L2-214ENST00000640043 ZNF592Q92610 1267 aa11.81□□□□□ -0.52
MCF2L2-214ENST00000640043 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
MCF2L2-214ENST00000640043 LEMD3Q9Y2U8 911 aa11.81□□□□□ -0.52
MCF2L2-214ENST00000640043 RANBP2P49792 3224 aaKnown RBP11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 ANKRD62A6NC57 917 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 DDX58O95786 925 aaKnown RBP11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 CLCN1P35523 988 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 RFC5P40937 340 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 FXR1P51114 621 aaKnown RBP eCLIP11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 RALBP1Q15311 655 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 KRT24Q2M2I5 525 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 PPP1R15BQ5SWA1 713 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 DUSP27Q5VZP5 1158 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 MTMR14Q8NCE2 650 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 SLC10A4Q96EP9 437 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 TMUB1Q9BVT8 246 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 PTPN22Q9Y2R2 807 aa11.8□□□□□ -0.52
MCF2L2-214ENST00000640043 ABL2P42684 1182 aa11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 CCT4P50991 539 aaKnown RBP11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 SUPT20HL1Q3ZLR7 823 aa11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 PRAMEF18Q5VWM3 479 aa11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 R3HDMLQ9H3Y0 253 aa11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 ANGEL1Q9UNK9 670 aaKnown RBP11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 MINPP1Q9UNW1 487 aa11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 A0A0C4DFX4 3053 aa11.79□□□□□ -0.52
MCF2L2-214ENST00000640043 POTEFA5A3E0 1075 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 KDM4AO75164 1064 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 ZNF16P17020 682 aaPredicted RBP11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 CTSWP56202 376 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 CALD1Q05682 793 aaKnown RBP11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 TTLL5Q6EMB2 1281 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 B4GALNT3Q6L9W6 998 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 NBPF11Q86T75 865 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 RUNDC1Q96C34 613 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 METTL22Q9BUU2 404 aaPredicted RBP11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 ANKRD2Q9GZV1 360 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 DEFB129Q9H1M3 183 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
MCF2L2-214ENST00000640043 MYO1BO43795 1136 aa11.77□□□□□ -0.53
MCF2L2-214ENST00000640043 SSTR3P32745 418 aaPredicted RBP11.77□□□□□ -0.53
MCF2L2-214ENST00000640043 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
MCF2L2-214ENST00000640043 WNK4Q96J92 1243 aa11.77□□□□□ -0.53
MCF2L2-214ENST00000640043 MYD88Q99836 296 aa11.77□□□□□ -0.53
MCF2L2-214ENST00000640043 EFCC1Q9HA90 598 aa11.77□□□□□ -0.53
MCF2L2-214ENST00000640043 LAS1LQ9Y4W2 734 aaKnown RBP11.77□□□□□ -0.53
MCF2L2-214ENST00000640043 SZT2Q5T011 3432 aa11.77□□□□□ -0.53
MCF2L2-214ENST00000640043 IGF2BP3O00425 579 aaKnown RBP eCLIP11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 SASH1O94885 1247 aa11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 IREB2P48200 963 aaKnown RBP11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 SP3Q02447 781 aa11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 DLGAP5Q15398 846 aa11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 ZNF804BA4D1E1 1349 aa11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 SPEF2Q9C093 1822 aa11.76□□□□□ -0.53
MCF2L2-214ENST00000640043 GRXCR2A6NFK2 248 aa11.75□□□□□ -0.53
MCF2L2-214ENST00000640043 GNRH1P01148 92 aa11.75□□□□□ -0.53
MCF2L2-214ENST00000640043 ZNF853P0CG23 659 aa11.75□□□□□ -0.53
MCF2L2-214ENST00000640043 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms