RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 OTOP1Q7RTM1 612 aa8.05□□□□□ -1.12
PRKCH-228ENST00000640011 RIC3Q7Z5B4 369 aa8.05□□□□□ -1.12
PRKCH-228ENST00000640011 ARMC5Q96C12 935 aa8.05□□□□□ -1.12
PRKCH-228ENST00000640011 SLC10A4Q96EP9 437 aa8.05□□□□□ -1.12
PRKCH-228ENST00000640011 COA1Q9GZY4 146 aa8.05□□□□□ -1.12
PRKCH-228ENST00000640011 PPP2R3BQ9Y5P8 575 aa8.05□□□□□ -1.12
PRKCH-228ENST00000640011 MED23Q9ULK4 1368 aa8.05□□□□□ -1.12
PRKCH-228ENST00000640011 BRCA2P51587 3418 aa8.05□□□□□ -1.12
PRKCH-228ENST00000640011 CENPFP49454 3210 aa8.05□□□□□ -1.12
PRKCH-228ENST00000640011 MYO1BO43795 1136 aa8.04□□□□□ -1.12
PRKCH-228ENST00000640011 DDX58O95786 925 aaKnown RBP8.04□□□□□ -1.12
PRKCH-228ENST00000640011 FXR1P51114 621 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRKCH-228ENST00000640011 PTPN12Q05209 780 aaKnown RBP8.04□□□□□ -1.12
PRKCH-228ENST00000640011 SUPT20HL1Q3ZLR7 823 aa8.04□□□□□ -1.12
PRKCH-228ENST00000640011 RTL5Q5HYW3 569 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-228ENST00000640011 DACT2Q5SW24 774 aa8.04□□□□□ -1.12
PRKCH-228ENST00000640011 EFCC1Q9HA90 598 aa8.04□□□□□ -1.12
PRKCH-228ENST00000640011 SEC31BQ9NQW1 1179 aa8.04□□□□□ -1.12
PRKCH-228ENST00000640011 BSDC1Q9NW68 430 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-228ENST00000640011 ANGEL1Q9UNK9 670 aaKnown RBP8.04□□□□□ -1.12
PRKCH-228ENST00000640011 PTPN22Q9Y2R2 807 aa8.04□□□□□ -1.12
PRKCH-228ENST00000640011 HTTP42858 3142 aa8.04□□□□□ -1.12
PRKCH-228ENST00000640011 PRAMEF18Q5VWM3 479 aa8.03□□□□□ -1.12
PRKCH-228ENST00000640011 TTLL5Q6EMB2 1281 aa8.03□□□□□ -1.12
PRKCH-228ENST00000640011 CWC25Q9NXE8 425 aaPredicted RBP8.03□□□□□ -1.12
PRKCH-228ENST00000640011 LEMD3Q9Y2U8 911 aa8.03□□□□□ -1.12
PRKCH-228ENST00000640011 DLG5Q8TDM6 1919 aa8.02□□□□□ -1.13
PRKCH-228ENST00000640011 SNPHO15079 494 aa8.02□□□□□ -1.13
PRKCH-228ENST00000640011 WDHD1O75717 1129 aaPredicted RBP8.02□□□□□ -1.13
PRKCH-228ENST00000640011 IREB2P48200 963 aaKnown RBP8.02□□□□□ -1.13
PRKCH-228ENST00000640011 CCT4P50991 539 aaKnown RBP8.02□□□□□ -1.13
PRKCH-228ENST00000640011 SP3Q02447 781 aa8.02□□□□□ -1.13
PRKCH-228ENST00000640011 DEFB129Q9H1M3 183 aa8.02□□□□□ -1.13
PRKCH-228ENST00000640011 KDM4CQ9H3R0 1056 aa8.02□□□□□ -1.13
PRKCH-228ENST00000640011 R3HDMLQ9H3Y0 253 aa8.02□□□□□ -1.13
PRKCH-228ENST00000640011 SCAF8Q9UPN6 1271 aaKnown RBP8.02□□□□□ -1.13
PRKCH-228ENST00000640011 LAS1LQ9Y4W2 734 aaKnown RBP8.02□□□□□ -1.13
PRKCH-228ENST00000640011 POLR2AP24928 1970 aaKnown RBP8.02□□□□□ -1.13
PRKCH-228ENST00000640011 SASH1O94885 1247 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 EN2P19622 333 aaPredicted RBP8.01□□□□□ -1.13
PRKCH-228ENST00000640011 IGHMBP2P38935 993 aaKnown RBP8.01□□□□□ -1.13
PRKCH-228ENST00000640011 CTSWP56202 376 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 CALD1Q05682 793 aaKnown RBP8.01□□□□□ -1.13
PRKCH-228ENST00000640011 PRKG1Q13976 671 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 DLGAP5Q15398 846 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 AMHR2Q16671 573 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 SLC9C1Q4G0N8 1177 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 DUSP27Q5VZP5 1158 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 ANKRD13AQ8IZ07 590 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 MTMR14Q8NCE2 650 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 ZNF428Q96B54 188 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 WNK4Q96J92 1243 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 ZNF333Q96JL9 665 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 PHOX2BQ99453 314 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 MYD88Q99836 296 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 ANKRD2Q9GZV1 360 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 MINPP1Q9UNW1 487 aa8.01□□□□□ -1.13
PRKCH-228ENST00000640011 IGF2BP3O00425 579 aaKnown RBP eCLIP8□□□□□ -1.13
PRKCH-228ENST00000640011 GNRH1P01148 92 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 COL9A1P20849 921 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 NEXNQ0ZGT2 675 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 CRHR2Q13324 411 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 TNFAIP1Q13829 316 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 RALBP1Q15311 655 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 KRT24Q2M2I5 525 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 SLC4A8Q2Y0W8 1093 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 PADI6Q6TGC4 694 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 KIAA0825Q8IV33 1275 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 PARP9Q8IXQ6 854 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 TTC13Q8NBP0 860 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 CD99L2Q8TCZ2 262 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 ZBED3Q96IU2 234 aaPredicted RBP8□□□□□ -1.13
PRKCH-228ENST00000640011 MPHOSPH8Q99549 860 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 METTL22Q9BUU2 404 aaPredicted RBP8□□□□□ -1.13
PRKCH-228ENST00000640011 SCN9AQ15858 1988 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 TAF1P21675 1872 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 ZNF804BA4D1E1 1349 aa8□□□□□ -1.13
PRKCH-228ENST00000640011 KCNJ4P48050 445 aa7.99□□□□□ -1.13
PRKCH-228ENST00000640011 PRMT2P55345 433 aa7.99□□□□□ -1.13
PRKCH-228ENST00000640011 FKBP1AP62942 108 aaKnown RBP7.99□□□□□ -1.13
PRKCH-228ENST00000640011 KIF22Q14807 665 aa7.99□□□□□ -1.13
PRKCH-228ENST00000640011 TTLL11Q8NHH1 800 aa7.99□□□□□ -1.13
PRKCH-228ENST00000640011 NKX2-3Q8TAU0 364 aa7.99□□□□□ -1.13
PRKCH-228ENST00000640011 RUNDC1Q96C34 613 aa7.99□□□□□ -1.13
PRKCH-228ENST00000640011 CCDC85AQ96PX6 553 aaPredicted RBP7.99□□□□□ -1.13
PRKCH-228ENST00000640011 REPIN1Q9BWE0 567 aaKnown RBP7.99□□□□□ -1.13
PRKCH-228ENST00000640011 ZFYVE28Q9HCC9 887 aa7.99□□□□□ -1.13
PRKCH-228ENST00000640011 FAM198AQ9UFP1 575 aa7.99□□□□□ -1.13
PRKCH-228ENST00000640011 PSME4Q14997 1843 aa7.99□□□□□ -1.13
PRKCH-228ENST00000640011 GTF2A2P52657 109 aa7.98□□□□□ -1.13
PRKCH-228ENST00000640011 GTF2IP78347 998 aa7.98□□□□□ -1.13
PRKCH-228ENST00000640011 PPP4R3BQ5MIZ7 849 aa7.98□□□□□ -1.13
PRKCH-228ENST00000640011 CCDC30Q5VVM6 783 aa7.98□□□□□ -1.13
PRKCH-228ENST00000640011 MXD3Q9BW11 206 aa7.98□□□□□ -1.13
PRKCH-228ENST00000640011 ZCCHC17Q9NP64 241 aaKnown RBP7.98□□□□□ -1.13
PRKCH-228ENST00000640011 RBBP6Q7Z6E9 1792 aaKnown RBP7.97□□□□□ -1.13
PRKCH-228ENST00000640011 SZT2Q5T011 3432 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 CAPN2P17655 700 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 PRSS12P56730 875 aa7.97□□□□□ -1.13
PRKCH-228ENST00000640011 GNAI1P63096 354 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms