RNA–Protein interactions for RNA: ENST00000639409.1

PAX6-257, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-257ENST00000639409 ERFEQ4G0M1 354 aa12.94□□□□□ -0.34
PAX6-257ENST00000639409 BICDL1Q6ZP65 573 aa12.94□□□□□ -0.34
PAX6-257ENST00000639409 AMIGO3Q86WK7 504 aa12.94□□□□□ -0.34
PAX6-257ENST00000639409 SPATA5Q8NB90 893 aa12.94□□□□□ -0.34
PAX6-257ENST00000639409 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
PAX6-257ENST00000639409 SLC5A1P13866 664 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 PDCP20941 246 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 CHRNDQ07001 517 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 TTC6Q86TZ1 520 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 RTL9Q8NET4 1388 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 BCAMP50895 628 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 FOSBP53539 338 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 TTF1Q15361 905 aaPredicted RBP12.93□□□□□ -0.34
PAX6-257ENST00000639409 FNBP4Q8N3X1 1017 aaPredicted RBP12.93□□□□□ -0.34
PAX6-257ENST00000639409 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
PAX6-257ENST00000639409 MYH15Q9Y2K3 1946 aa12.92□□□□□ -0.34
PAX6-257ENST00000639409 NHSQ6T4R5 1651 aa12.92□□□□□ -0.34
PAX6-257ENST00000639409 PTPDC1A2A3K4 754 aa12.92□□□□□ -0.34
PAX6-257ENST00000639409 PDIA3P30101 505 aaKnown RBP12.92□□□□□ -0.34
PAX6-257ENST00000639409 IGHMBP2P38935 993 aaKnown RBP12.92□□□□□ -0.34
PAX6-257ENST00000639409 ANTXR2P58335 489 aa12.92□□□□□ -0.34
PAX6-257ENST00000639409 TBC1D9BQ66K14 1250 aa12.92□□□□□ -0.34
PAX6-257ENST00000639409 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
PAX6-257ENST00000639409 RNF214Q8ND24 703 aa12.92□□□□□ -0.34
PAX6-257ENST00000639409 CTNNA3Q9UI47 895 aa12.92□□□□□ -0.34
PAX6-257ENST00000639409 KDM4AO75164 1064 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 UQCRFS1P1P0C7P4 283 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 UBE3CQ15386 1083 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
PAX6-257ENST00000639409 USP21Q9UK80 565 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 SALL1Q9NSC2 1324 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 CLEC4GQ6UXB4 293 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 RAB11FIP4Q86YS3 637 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 KCTD17Q8N5Z5 321 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 MAGEB6Q8N7X4 407 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 SYAP1Q96A49 352 aaPredicted RBP12.91□□□□□ -0.34
PAX6-257ENST00000639409 IQSEC3Q9UPP2 1182 aaPredicted RBP12.91□□□□□ -0.34
PAX6-257ENST00000639409 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
PAX6-257ENST00000639409 ZNF213O14771 459 aa12.9□□□□□ -0.34
PAX6-257ENST00000639409 PRC1O43663 620 aa12.9□□□□□ -0.34
PAX6-257ENST00000639409 KRT85P78386 507 aa12.9□□□□□ -0.34
PAX6-257ENST00000639409 ZSCAN25Q6NSZ9 544 aa12.9□□□□□ -0.34
PAX6-257ENST00000639409 TMTC2Q8N394 836 aa12.9□□□□□ -0.34
PAX6-257ENST00000639409 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
PAX6-257ENST00000639409 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
PAX6-257ENST00000639409 CHD4Q14839 1912 aa12.9□□□□□ -0.34
PAX6-257ENST00000639409 COL1A1P02452 1464 aaPredicted RBP12.9□□□□□ -0.34
PAX6-257ENST00000639409 RESTQ13127 1097 aa12.9□□□□□ -0.34
PAX6-257ENST00000639409 COL24A1Q17RW2 1714 aa12.9□□□□□ -0.34
PAX6-257ENST00000639409 CCDC183Q5T5S1 534 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 NBPF11Q86T75 865 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 FAM184AQ8NB25 1140 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 LLPHQ9BRT6 129 aaKnown RBP12.89□□□□□ -0.35
PAX6-257ENST00000639409 EPB41L4AQ9HCS5 686 aaPredicted RBP12.89□□□□□ -0.35
PAX6-257ENST00000639409 CCDC173Q0VFZ6 552 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 NCOA7Q8NI08 942 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 CELF1Q92879 486 aaKnown RBP12.89□□□□□ -0.35
PAX6-257ENST00000639409 AIDAQ96BJ3 306 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 ZNF274Q96GC6 653 aaPredicted RBP12.89□□□□□ -0.35
PAX6-257ENST00000639409 PPP1R9BQ96SB3 815 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 STRBPQ96SI9 672 aaKnown RBP12.89□□□□□ -0.35
PAX6-257ENST00000639409 C4AP0C0L4 1744 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 C4BP0C0L5 1744 aa12.89□□□□□ -0.35
PAX6-257ENST00000639409 SBF2Q86WG5 1849 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 TTC36A6NLP5 189 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 H3BQV1 296 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 GNPATO15228 680 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 MBD4O95243 580 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 MCM5P33992 734 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 EVCP57679 992 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 RALYLQ86SE5 291 aaKnown RBP12.88□□□□□ -0.35
PAX6-257ENST00000639409 SMAP1Q8IYB5 467 aaPredicted RBP12.88□□□□□ -0.35
PAX6-257ENST00000639409 FBXL16Q8N461 479 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 TSPY26PQ9H489 355 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 ARMT1Q9H993 441 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 HPS5Q9UPZ3 1129 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 NEDD4P46934 1319 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 LY75O60449 1722 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 GOLGB1Q14789 3259 aaKnown RBP12.88□□□□□ -0.35
PAX6-257ENST00000639409 FDPSP14324 419 aaKnown RBP12.88□□□□□ -0.35
PAX6-257ENST00000639409 GYG1P46976 350 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 CYB5R4Q7L1T6 521 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 CDC5LQ99459 802 aaKnown RBP12.88□□□□□ -0.35
PAX6-257ENST00000639409 FTOQ9C0B1 505 aaKnown RBP eCLIP12.88□□□□□ -0.35
PAX6-257ENST00000639409 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
PAX6-257ENST00000639409 KLF18A0A0U1RQI7 1052 aa12.87□□□□□ -0.35
PAX6-257ENST00000639409 ZBTB22O15209 634 aa12.87□□□□□ -0.35
PAX6-257ENST00000639409 ELP1O95163 1332 aa12.87□□□□□ -0.35
PAX6-257ENST00000639409 GUCY1B3Q02153 619 aa12.87□□□□□ -0.35
PAX6-257ENST00000639409 CSPP1Q1MSJ5 1256 aa12.87□□□□□ -0.35
PAX6-257ENST00000639409 LEO1Q8WVC0 666 aaPredicted RBP12.87□□□□□ -0.35
PAX6-257ENST00000639409 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms