RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 CDPF1Q6NVV7 123 aa5.89□□□□□ -1.47
ATM-228ENST00000639240 DTX1Q86Y01 620 aa5.89□□□□□ -1.47
ATM-228ENST00000639240 CCNJLQ8IV13 435 aa5.89□□□□□ -1.47
ATM-228ENST00000639240 SMG8Q8ND04 991 aaKnown RBP5.89□□□□□ -1.47
ATM-228ENST00000639240 MFSD14AQ96MC6 490 aa5.89□□□□□ -1.47
ATM-228ENST00000639240 USP26Q9BXU7 913 aa5.89□□□□□ -1.47
ATM-228ENST00000639240 SOX17Q9H6I2 414 aaPredicted RBP5.89□□□□□ -1.47
ATM-228ENST00000639240 SUGCTQ9HAC7 445 aa5.89□□□□□ -1.47
ATM-228ENST00000639240 COL17A1Q9UMD9 1497 aaPredicted RBP5.89□□□□□ -1.47
ATM-228ENST00000639240 ECEL1O95672 775 aa5.88□□□□□ -1.47
ATM-228ENST00000639240 IGHA2P01877 340 aa5.88□□□□□ -1.47
ATM-228ENST00000639240 F13BP05160 661 aa5.88□□□□□ -1.47
ATM-228ENST00000639240 ARL4DP49703 201 aa5.88□□□□□ -1.47
ATM-228ENST00000639240 GP2P55259 537 aaKnown RBP5.88□□□□□ -1.47
ATM-228ENST00000639240 FDX2Q6P4F2 183 aa5.88□□□□□ -1.47
ATM-228ENST00000639240 GALNT12Q8IXK2 581 aa5.88□□□□□ -1.47
ATM-228ENST00000639240 C12orf50Q8NA57 414 aaPredicted RBP5.88□□□□□ -1.47
ATM-228ENST00000639240 C2CD4AQ8NCU7 369 aaPredicted RBP5.88□□□□□ -1.47
ATM-228ENST00000639240 TMC1Q8TDI8 760 aa5.88□□□□□ -1.47
ATM-228ENST00000639240 A0A096LPE4 126 aa5.87□□□□□ -1.47
ATM-228ENST00000639240 A0A1W2PPZ6 126 aa5.87□□□□□ -1.47
ATM-228ENST00000639240 WDR64B1ANS9 1081 aa5.87□□□□□ -1.47
ATM-228ENST00000639240 PATL2C9JE40 543 aaKnown RBP5.87□□□□□ -1.47
ATM-228ENST00000639240 ADMP35318 185 aa5.87□□□□□ -1.47
ATM-228ENST00000639240 GSTM4Q03013 218 aa5.87□□□□□ -1.47
ATM-228ENST00000639240 EXOSC6Q5RKV6 272 aaKnown RBP5.87□□□□□ -1.47
ATM-228ENST00000639240 NUTM2GQ5VZR2 741 aa5.87□□□□□ -1.47
ATM-228ENST00000639240 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
ATM-228ENST00000639240 NFXL1Q6ZNB6 911 aa5.87□□□□□ -1.47
ATM-228ENST00000639240 HIF3AQ9Y2N7 669 aa5.87□□□□□ -1.47
ATM-228ENST00000639240 ORC1Q13415 861 aa5.86□□□□□ -1.47
ATM-228ENST00000639240 FBLIM1Q8WUP2 373 aa5.86□□□□□ -1.47
ATM-228ENST00000639240 GATA6Q92908 595 aa5.86□□□□□ -1.47
ATM-228ENST00000639240 CITED4Q96RK1 184 aa5.86□□□□□ -1.47
ATM-228ENST00000639240 TRIM56Q9BRZ2 755 aaKnown RBP5.86□□□□□ -1.47
ATM-228ENST00000639240 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
ATM-228ENST00000639240 SOX4Q06945 474 aaPredicted RBP5.85□□□□□ -1.47
ATM-228ENST00000639240 PCDH1Q08174 1060 aa5.85□□□□□ -1.47
ATM-228ENST00000639240 PDE3BQ13370 1112 aa5.85□□□□□ -1.47
ATM-228ENST00000639240 INTS5Q6P9B9 1019 aaKnown RBP5.85□□□□□ -1.47
ATM-228ENST00000639240 LIN7BQ9HAP6 207 aa5.85□□□□□ -1.47
ATM-228ENST00000639240 GAS2O43903 313 aaKnown RBP5.84□□□□□ -1.47
ATM-228ENST00000639240 TAL1P17542 331 aaPredicted RBP5.84□□□□□ -1.47
ATM-228ENST00000639240 MAOBP27338 520 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 MAPK1P28482 360 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 MSMPQ1L6U9 139 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 KIAA0319Q5VV43 1072 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 FBXL6Q8N531 539 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 EZH1Q92800 747 aaPredicted RBP5.84□□□□□ -1.47
ATM-228ENST00000639240 FAM129BQ96TA1 746 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 NIF3L1Q9GZT8 377 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 CLEC4MQ9H2X3 399 aaPredicted RBP5.84□□□□□ -1.47
ATM-228ENST00000639240 CYP4F12Q9HCS2 524 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 DCTN4Q9UJW0 460 aa5.84□□□□□ -1.47
ATM-228ENST00000639240 FAM95CA0A1B0GW59 222 aa5.83□□□□□ -1.48
ATM-228ENST00000639240 GPR182O15218 404 aa5.83□□□□□ -1.48
ATM-228ENST00000639240 RXRBP28702 533 aa5.83□□□□□ -1.48
ATM-228ENST00000639240 COL19A1Q14993 1142 aa5.83□□□□□ -1.48
ATM-228ENST00000639240 NFKBIBQ15653 356 aa5.83□□□□□ -1.48
ATM-228ENST00000639240 RBCK1Q9BYM8 510 aa5.83□□□□□ -1.48
ATM-228ENST00000639240 PIM2Q9P1W9 311 aa5.83□□□□□ -1.48
ATM-228ENST00000639240 ACTL7BQ9Y614 415 aa5.83□□□□□ -1.48
ATM-228ENST00000639240 NEFLP07196 543 aa5.82□□□□□ -1.48
ATM-228ENST00000639240 ADH5P11766 374 aa5.82□□□□□ -1.48
ATM-228ENST00000639240 YBX3P16989 372 aaKnown RBP eCLIP5.82□□□□□ -1.48
ATM-228ENST00000639240 GRIK1P39086 918 aa5.82□□□□□ -1.48
ATM-228ENST00000639240 TMC7Q7Z402 723 aa5.82□□□□□ -1.48
ATM-228ENST00000639240 DMRTB1Q96MA1 342 aa5.82□□□□□ -1.48
ATM-228ENST00000639240 ZNF576Q9H609 170 aa5.82□□□□□ -1.48
ATM-228ENST00000639240 NPHS2Q9NP85 383 aa5.82□□□□□ -1.48
ATM-228ENST00000639240 PRKAG2Q9UGJ0 569 aa5.82□□□□□ -1.48
ATM-228ENST00000639240 ADGRE2Q9UHX3 823 aa5.82□□□□□ -1.48
ATM-228ENST00000639240 FAM170BA6NMN3 283 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 DYNC1LI2O43237 492 aaPredicted RBP5.81□□□□□ -1.48
ATM-228ENST00000639240 WNT11O96014 354 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 B3GALT4O96024 378 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 NFICP08651 508 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 ITPKAP23677 461 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 IRAK1P51617 712 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 SEZ6L2Q6UXD5 910 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 GLIS3Q8NEA6 775 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 FMNL2Q96PY5 1086 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 GSX1Q9H4S2 264 aaPredicted RBP5.81□□□□□ -1.48
ATM-228ENST00000639240 ABCB6Q9NP58 842 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 FAM105AQ9NUU6 356 aa5.81□□□□□ -1.48
ATM-228ENST00000639240 CPNE3O75131 537 aaKnown RBP5.8□□□□□ -1.48
ATM-228ENST00000639240 FOSL1P15407 271 aa5.8□□□□□ -1.48
ATM-228ENST00000639240 USP11P51784 963 aa5.8□□□□□ -1.48
ATM-228ENST00000639240 FAAP100Q0VG06 881 aa5.8□□□□□ -1.48
ATM-228ENST00000639240 POU4F3Q15319 338 aa5.8□□□□□ -1.48
ATM-228ENST00000639240 ZAR1Q86SH2 424 aa5.8□□□□□ -1.48
ATM-228ENST00000639240 WDR89Q96FK6 387 aaPredicted RBP5.8□□□□□ -1.48
ATM-228ENST00000639240 SEMA6CQ9H3T2 930 aa5.8□□□□□ -1.48
ATM-228ENST00000639240 ACSS3Q9H6R3 686 aa5.8□□□□□ -1.48
ATM-228ENST00000639240 EIF1AYO14602 144 aaKnown RBP5.79□□□□□ -1.48
ATM-228ENST00000639240 AKAP4Q5JQC9 854 aa5.79□□□□□ -1.48
ATM-228ENST00000639240 ZSCAN29Q8IWY8 852 aaPredicted RBP5.79□□□□□ -1.48
ATM-228ENST00000639240 HOMEZQ8IX15 550 aa5.79□□□□□ -1.48
ATM-228ENST00000639240 ABI1Q8IZP0 508 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms