RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 ZNF34Q8IZ26 560 aa12.39□□□□□ -0.43
NECAP1-216ENST00000639167 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
NECAP1-216ENST00000639167 CHMP4CQ96CF2 233 aa12.39□□□□□ -0.43
NECAP1-216ENST00000639167 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
NECAP1-216ENST00000639167 CLIC4Q9Y696 253 aa12.39□□□□□ -0.43
NECAP1-216ENST00000639167 MYO5AQ9Y4I1 1855 aaKnown RBP12.39□□□□□ -0.43
NECAP1-216ENST00000639167 KIF28PB7ZC32 967 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
NECAP1-216ENST00000639167 KINO60870 393 aaKnown RBP12.38□□□□□ -0.43
NECAP1-216ENST00000639167 SUSD4Q5VX71 490 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 ATL3Q6DD88 541 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 ENGASEQ8NFI3 743 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 ACSBG1Q96GR2 724 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 ZNF512BQ96KM6 892 aaPredicted RBP12.38□□□□□ -0.43
NECAP1-216ENST00000639167 SENP2Q9HC62 589 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 INCENPQ9NQS7 918 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 SEC31BQ9NQW1 1179 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 NUP98P52948 1817 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 ANKRD36CQ5JPF3 1778 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 SLIT2O94813 1529 aa12.38□□□□□ -0.43
NECAP1-216ENST00000639167 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 B4E1Z4 1266 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 RRP9O43818 475 aaKnown RBP12.37□□□□□ -0.43
NECAP1-216ENST00000639167 ARID4AP29374 1257 aaPredicted RBP12.37□□□□□ -0.43
NECAP1-216ENST00000639167 FAM160A1Q05DH4 1040 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 STK38Q15208 465 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 UBE3CQ15386 1083 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 PUM3Q15397 648 aaKnown RBP12.37□□□□□ -0.43
NECAP1-216ENST00000639167 CCDC186Q7Z3E2 898 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 KIAA1524Q8TCG1 905 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 AIFM3Q96NN9 605 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 MYH3P11055 1940 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 TPM3P06753 285 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 FGFR2P21802 821 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 SF3A1Q15459 793 aaKnown RBP12.37□□□□□ -0.43
NECAP1-216ENST00000639167 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 CCDC144CPQ8IYA2 1237 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 LPIN2Q92539 896 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 AIDAQ96BJ3 306 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 FAM13BQ9NYF5 915 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 RTEL1Q9NZ71 1219 aa12.37□□□□□ -0.43
NECAP1-216ENST00000639167 NEDD4P46934 1319 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 TCRBV5S4A2TA0A5A2 114 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 CTAGE5O15320 804 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 IQCB1Q15051 598 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 STX1AQ16623 288 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 MYSM1Q5VVJ2 828 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 LINC00301Q8NCQ3 95 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 DNAJC5Q9H3Z4 198 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 SPTLC3Q9NUV7 552 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 ANGEL1Q9UNK9 670 aaKnown RBP12.36□□□□□ -0.43
NECAP1-216ENST00000639167 MROH5Q6ZUA9 1318 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 GOLGA6L19H0YKK7 550 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 SH2B2O14492 632 aaPredicted RBP12.36□□□□□ -0.43
NECAP1-216ENST00000639167 METAP2P50579 478 aaKnown RBP eCLIP12.36□□□□□ -0.43
NECAP1-216ENST00000639167 CTDSPL2Q05D32 466 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 LRMPQ12912 555 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 RASGRF1Q13972 1273 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 INTS5Q6P9B9 1019 aaKnown RBP12.36□□□□□ -0.43
NECAP1-216ENST00000639167 MICU3Q86XE3 530 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 MAGEB6Q8N7X4 407 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 SPATA5Q8NB90 893 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 MRPS27Q92552 414 aaKnown RBP12.36□□□□□ -0.43
NECAP1-216ENST00000639167 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
NECAP1-216ENST00000639167 ARMT1Q9H993 441 aa12.36□□□□□ -0.43
NECAP1-216ENST00000639167 WDR19Q8NEZ3 1342 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 ATRNO75882 1429 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 MBD4O95243 580 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 SLC5A1P13866 664 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 CDC27P30260 824 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 ATP6V1AP38606 617 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 NDUFA8P51970 172 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 EIF5P55010 431 aaKnown RBP12.35□□□□□ -0.43
NECAP1-216ENST00000639167 KIF23Q02241 960 aaPredicted RBP12.35□□□□□ -0.43
NECAP1-216ENST00000639167 ADALQ6DHV7 355 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 PHKBQ93100 1093 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 MPHOSPH8Q99549 860 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 MYL10Q9BUA6 226 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 EPB41L4AQ9HCS5 686 aaPredicted RBP12.35□□□□□ -0.43
NECAP1-216ENST00000639167 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
NECAP1-216ENST00000639167 ZMYM6O95789 1325 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 ADAMTS2O95450 1211 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 CRKLP46109 303 aaKnown RBP12.35□□□□□ -0.43
NECAP1-216ENST00000639167 SYNE3Q6ZMZ3 975 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 FMR1NBQ8N0W7 255 aaPredicted RBP12.35□□□□□ -0.43
NECAP1-216ENST00000639167 STK11IPQ8N1F8 1099 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 CCDC87Q9NVE4 849 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 CLIP2Q9UDT6 1046 aa12.35□□□□□ -0.43
NECAP1-216ENST00000639167 SPTLC2O15270 562 aa12.34□□□□□ -0.43
NECAP1-216ENST00000639167 PRKAB2O43741 272 aa12.34□□□□□ -0.43
NECAP1-216ENST00000639167 BCAMP50895 628 aa12.34□□□□□ -0.43
NECAP1-216ENST00000639167 APOA5Q6Q788 366 aa12.34□□□□□ -0.43
NECAP1-216ENST00000639167 NFXL1Q6ZNB6 911 aa12.34□□□□□ -0.43
NECAP1-216ENST00000639167 IFNL3Q8IZI9 196 aa12.34□□□□□ -0.43
NECAP1-216ENST00000639167 TSC1Q92574 1164 aa12.34□□□□□ -0.43
NECAP1-216ENST00000639167 SDF4Q9BRK5 362 aa12.34□□□□□ -0.43
NECAP1-216ENST00000639167 ALG1Q9BT22 464 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms