RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 GTF2IP78347 998 aa15.74■□□□□ 0.11
SCN8A-215ENST00000638820 Q6ZUG5 572 aa15.74■□□□□ 0.11
SCN8A-215ENST00000638820 TICAM2Q86XR7 235 aa15.74■□□□□ 0.11
SCN8A-215ENST00000638820 SDR42E1Q8WUS8 393 aa15.74■□□□□ 0.11
SCN8A-215ENST00000638820 ZSCAN31Q96LW9 406 aaPredicted RBP15.74■□□□□ 0.11
SCN8A-215ENST00000638820 PRKAB2O43741 272 aa15.74■□□□□ 0.11
SCN8A-215ENST00000638820 NFXL1Q6ZNB6 911 aa15.74■□□□□ 0.11
SCN8A-215ENST00000638820 E7EWF7 191 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 USP5P45974 858 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 LCORLQ8N3X6 602 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 NCOA7Q8NI08 942 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 TBC1D16Q8TBP0 767 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 CNKSR1Q969H4 720 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 ZNF831Q5JPB2 1677 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 GNAT2P19087 354 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 MFSD14BQ5SR56 506 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 AMOTL1Q8IY63 956 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 CD209Q9NNX6 404 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 HOXA10P31260 410 aaPredicted RBP15.73■□□□□ 0.11
SCN8A-215ENST00000638820 DHX32Q7L7V1 743 aaKnown RBP15.73■□□□□ 0.11
SCN8A-215ENST00000638820 SP8Q8IXZ3 490 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 STRBPQ96SI9 672 aaKnown RBP15.73■□□□□ 0.11
SCN8A-215ENST00000638820 EYA3Q99504 573 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 CIZ1Q9ULV3 898 aaPredicted RBP15.73■□□□□ 0.11
SCN8A-215ENST00000638820 ATP6V0A2Q9Y487 856 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 SCN7AQ01118 1682 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 RREB1Q92766 1687 aa15.73■□□□□ 0.11
SCN8A-215ENST00000638820 LDHCP07864 332 aa15.72■□□□□ 0.11
SCN8A-215ENST00000638820 IFNL3Q8IZI9 196 aa15.72■□□□□ 0.11
SCN8A-215ENST00000638820 CRNKL1Q9BZJ0 848 aaKnown RBP15.72■□□□□ 0.11
SCN8A-215ENST00000638820 A0A0G2JLW4 131 aa15.72■□□□□ 0.11
SCN8A-215ENST00000638820 VPS37CA5D8V6 355 aaPredicted RBP15.72■□□□□ 0.11
SCN8A-215ENST00000638820 PATL2C9JE40 543 aaKnown RBP15.72■□□□□ 0.11
SCN8A-215ENST00000638820 DYNLL1P63167 89 aaKnown RBP15.72■□□□□ 0.11
SCN8A-215ENST00000638820 MECOMQ03112 1051 aa15.72■□□□□ 0.11
SCN8A-215ENST00000638820 FAM184AQ8NB25 1140 aa15.72■□□□□ 0.11
SCN8A-215ENST00000638820 SH2B1Q9NRF2 756 aaPredicted RBP15.72■□□□□ 0.11
SCN8A-215ENST00000638820 BCORQ6W2J9 1755 aa15.72■□□□□ 0.11
SCN8A-215ENST00000638820 POLLQ9UGP5 575 aa15.72■□□□□ 0.11
SCN8A-215ENST00000638820 CPLX1O14810 134 aa15.71■□□□□ 0.11
SCN8A-215ENST00000638820 BAG3O95817 575 aa15.71■□□□□ 0.11
SCN8A-215ENST00000638820 NCLP19338 710 aaKnown RBP15.71■□□□□ 0.11
SCN8A-215ENST00000638820 RBM5P52756 815 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCN8A-215ENST00000638820 SPEF2Q9C093 1822 aa15.71■□□□□ 0.11
SCN8A-215ENST00000638820 ERICH2A1L162 156 aa15.71■□□□□ 0.11
SCN8A-215ENST00000638820 PPFIA3O75145 1194 aa15.71■□□□□ 0.11
SCN8A-215ENST00000638820 MCM5P33992 734 aa15.71■□□□□ 0.11
SCN8A-215ENST00000638820 MFSD6Q6ZSS7 791 aa15.71■□□□□ 0.11
SCN8A-215ENST00000638820 RAB11FIP4Q86YS3 637 aa15.71■□□□□ 0.11
SCN8A-215ENST00000638820 FOSBP53539 338 aa15.7■□□□□ 0.1
SCN8A-215ENST00000638820 CCT2P78371 535 aaKnown RBP15.7■□□□□ 0.1
SCN8A-215ENST00000638820 CTDSPL2Q05D32 466 aa15.7■□□□□ 0.1
SCN8A-215ENST00000638820 R3HDM1Q15032 1099 aaKnown RBP15.7■□□□□ 0.1
SCN8A-215ENST00000638820 DIXDC1Q155Q3 683 aa15.7■□□□□ 0.1
SCN8A-215ENST00000638820 DBNDD1Q9H9R9 158 aa15.7■□□□□ 0.1
SCN8A-215ENST00000638820 CICQ96RK0 1608 aaPredicted RBP15.7■□□□□ 0.1
SCN8A-215ENST00000638820 UBR3Q6ZT12 1888 aa15.7■□□□□ 0.1
SCN8A-215ENST00000638820 DDX60Q8IY21 1712 aaKnown RBP15.7■□□□□ 0.1
SCN8A-215ENST00000638820 B4E1Z4 1266 aa15.7■□□□□ 0.1
SCN8A-215ENST00000638820 PRC1O43663 620 aa15.7■□□□□ 0.1
SCN8A-215ENST00000638820 C21orf2O43822 256 aa15.7■□□□□ 0.1
SCN8A-215ENST00000638820 GSTO1P78417 241 aa15.7■□□□□ 0.1
SCN8A-215ENST00000638820 APOBRQ0VD83 1088 aa15.69■□□□□ 0.1
SCN8A-215ENST00000638820 SART3Q15020 963 aaKnown RBP15.69■□□□□ 0.1
SCN8A-215ENST00000638820 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
SCN8A-215ENST00000638820 DDX11Q96FC9 970 aa15.69■□□□□ 0.1
SCN8A-215ENST00000638820 RANBP6O60518 1105 aaKnown RBP15.69■□□□□ 0.1
SCN8A-215ENST00000638820 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
SCN8A-215ENST00000638820 ME3Q16798 604 aa15.68■□□□□ 0.1
SCN8A-215ENST00000638820 STOX1Q6ZVD7 989 aa15.68■□□□□ 0.1
SCN8A-215ENST00000638820 ILDR1Q86SU0 546 aaPredicted RBP15.68■□□□□ 0.1
SCN8A-215ENST00000638820 SLF2Q8IX21 1173 aa15.68■□□□□ 0.1
SCN8A-215ENST00000638820 IL27Q8NEV9 243 aa15.68■□□□□ 0.1
SCN8A-215ENST00000638820 TNPO1Q92973 898 aaKnown RBP15.68■□□□□ 0.1
SCN8A-215ENST00000638820 TTC14Q96N46 770 aa15.68■□□□□ 0.1
SCN8A-215ENST00000638820 MCM9Q9NXL9 1143 aa15.68■□□□□ 0.1
SCN8A-215ENST00000638820 TPCN1Q9ULQ1 816 aa15.68■□□□□ 0.1
SCN8A-215ENST00000638820 C4AP0C0L4 1744 aa15.68■□□□□ 0.1
SCN8A-215ENST00000638820 SLC3A2P08195 630 aaKnown RBP15.68■□□□□ 0.1
SCN8A-215ENST00000638820 NSUN4Q96CB9 384 aaKnown RBP15.68■□□□□ 0.1
SCN8A-215ENST00000638820 UBAC1Q9BSL1 405 aa15.68■□□□□ 0.1
SCN8A-215ENST00000638820 RNF41Q9H4P4 317 aaPredicted RBP15.68■□□□□ 0.1
SCN8A-215ENST00000638820 H3BQV1 296 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 IFIT3O14879 490 aaKnown RBP15.67■□□□□ 0.1
SCN8A-215ENST00000638820 KDM4AO75164 1064 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 IFFO2Q5TF58 517 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 TDRD7Q8NHU6 1098 aaKnown RBP15.67■□□□□ 0.1
SCN8A-215ENST00000638820 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 LARGE1O95461 756 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 POLR3DP05423 398 aaPredicted RBP15.67■□□□□ 0.1
SCN8A-215ENST00000638820 CCDC125Q86Z20 511 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 TTLL6Q8N841 843 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 SLC16A10Q8TF71 515 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 TCRBV5S4A2TA0A5A2 114 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 GJB2P29033 226 aa15.67■□□□□ 0.1
SCN8A-215ENST00000638820 LARP1BQ659C4 914 aaKnown RBP15.67■□□□□ 0.1
SCN8A-215ENST00000638820 INTS4Q96HW7 963 aaKnown RBP15.67■□□□□ 0.1
SCN8A-215ENST00000638820 USP17L12C9JPN9 530 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 USP17L21D6R901 530 aa15.66■□□□□ 0.1
SCN8A-215ENST00000638820 PPIP5K2O43314 1243 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms