RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 OPTNQ96CV9 577 aa15.33■□□□□ 0.04
CACNA1A-250ENST00000637809 BICC1Q9H694 974 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-250ENST00000637809 ELP3Q9H9T3 547 aa15.33■□□□□ 0.04
CACNA1A-250ENST00000637809 PCDH10Q9P2E7 1040 aa15.33■□□□□ 0.04
CACNA1A-250ENST00000637809 MROH5Q6ZUA9 1318 aa15.33■□□□□ 0.04
CACNA1A-250ENST00000637809 LRRC24Q50LG9 513 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 ANKRD44Q8N8A2 993 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 VGLL2Q8N8G2 317 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 CD99L2Q8TCZ2 262 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 ERO1AQ96HE7 468 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 TMEM39BQ9GZU3 492 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 PTPN22Q9Y2R2 807 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 CACNA1FO60840 1977 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 ZNF521Q96K83 1311 aa15.32■□□□□ 0.04
CACNA1A-250ENST00000637809 POTEFA5A3E0 1075 aa15.31■□□□□ 0.04
CACNA1A-250ENST00000637809 TCP10L2B9ZVM9 353 aa15.31■□□□□ 0.04
CACNA1A-250ENST00000637809 VGLL4Q14135 290 aa15.31■□□□□ 0.04
CACNA1A-250ENST00000637809 OTUD7BQ6GQQ9 843 aa15.31■□□□□ 0.04
CACNA1A-250ENST00000637809 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.31■□□□□ 0.04
CACNA1A-250ENST00000637809 BRI3BPQ8WY22 251 aa15.31■□□□□ 0.04
CACNA1A-250ENST00000637809 LAMB1P07942 1786 aa15.3■□□□□ 0.04
CACNA1A-250ENST00000637809 HDLBPQ00341 1268 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-250ENST00000637809 ECM29Q5VYK3 1845 aa15.3■□□□□ 0.04
CACNA1A-250ENST00000637809 INTS3Q68E01 1043 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-250ENST00000637809 MRPL50Q8N5N7 158 aaKnown RBP15.3■□□□□ 0.04
CACNA1A-250ENST00000637809 ARMC5Q96C12 935 aa15.3■□□□□ 0.04
CACNA1A-250ENST00000637809 IQSEC3Q9UPP2 1182 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-250ENST00000637809 PDE8BO95263 885 aa15.29■□□□□ 0.04
CACNA1A-250ENST00000637809 MAP3K9P80192 1104 aa15.29■□□□□ 0.04
CACNA1A-250ENST00000637809 SP3Q02447 781 aa15.29■□□□□ 0.04
CACNA1A-250ENST00000637809 CHAF1AQ13111 956 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-250ENST00000637809 METTL24Q5JXM2 366 aa15.29■□□□□ 0.04
CACNA1A-250ENST00000637809 FAM9BQ8IZU0 186 aa15.29■□□□□ 0.04
CACNA1A-250ENST00000637809 EFCC1Q9HA90 598 aa15.29■□□□□ 0.04
CACNA1A-250ENST00000637809 TNNI2P48788 182 aa15.28■□□□□ 0.04
CACNA1A-250ENST00000637809 BCAMP50895 628 aa15.28■□□□□ 0.04
CACNA1A-250ENST00000637809 CACNB3P54284 484 aa15.28■□□□□ 0.04
CACNA1A-250ENST00000637809 APOBEC3HQ6NTF7 200 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-250ENST00000637809 VPS37DQ86XT2 251 aa15.28■□□□□ 0.04
CACNA1A-250ENST00000637809 TBC1D22AQ8WUA7 517 aa15.28■□□□□ 0.04
CACNA1A-250ENST00000637809 ZDHHC15Q96MV8 337 aa15.28■□□□□ 0.04
CACNA1A-250ENST00000637809 MRIQ9BWK5 157 aa15.28■□□□□ 0.04
CACNA1A-250ENST00000637809 CCL15-CCL14A0A0B4J2E2 113 aa15.27■□□□□ 0.04
CACNA1A-250ENST00000637809 FGFR2P21802 821 aa15.27■□□□□ 0.04
CACNA1A-250ENST00000637809 GTF2A2P52657 109 aa15.27■□□□□ 0.04
CACNA1A-250ENST00000637809 CCL15Q16663 113 aa15.27■□□□□ 0.04
CACNA1A-250ENST00000637809 CAVIN4Q5BKX8 364 aa15.27■□□□□ 0.04
CACNA1A-250ENST00000637809 FAM43AQ8N2R8 423 aa15.27■□□□□ 0.04
CACNA1A-250ENST00000637809 KLHDC4Q8TBB5 520 aa15.27■□□□□ 0.04
CACNA1A-250ENST00000637809 TEKT1Q969V4 418 aa15.27■□□□□ 0.04
CACNA1A-250ENST00000637809 SNCAIPQ9Y6H5 919 aa15.27■□□□□ 0.04
CACNA1A-250ENST00000637809 PTPRCP08575 1304 aa15.26■□□□□ 0.03
CACNA1A-250ENST00000637809 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
CACNA1A-250ENST00000637809 SPDYE5A6NIY4 337 aa15.26■□□□□ 0.03
CACNA1A-250ENST00000637809 OTUD5Q96G74 571 aa15.26■□□□□ 0.03
CACNA1A-250ENST00000637809 USP44Q9H0E7 712 aa15.26■□□□□ 0.03
CACNA1A-250ENST00000637809 CSADQ9Y600 493 aa15.26■□□□□ 0.03
CACNA1A-250ENST00000637809 OTOFQ9HC10 1997 aa15.25■□□□□ 0.03
CACNA1A-250ENST00000637809 ZNF316A6NFI3 1004 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-250ENST00000637809 FRAT2O75474 233 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-250ENST00000637809 PUM3Q15397 648 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-250ENST00000637809 TAF1CQ15572 869 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-250ENST00000637809 FKBP1CQ5VVH2 108 aa15.25■□□□□ 0.03
CACNA1A-250ENST00000637809 FAM83AQ86UY5 434 aa15.25■□□□□ 0.03
CACNA1A-250ENST00000637809 SUGT1Q9Y2Z0 365 aa15.25■□□□□ 0.03
CACNA1A-250ENST00000637809 ARAP2Q8WZ64 1704 aa15.25■□□□□ 0.03
CACNA1A-250ENST00000637809 EN2P19622 333 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-250ENST00000637809 RFX5P48382 616 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-250ENST00000637809 SSH1Q8WYL5 1049 aa15.24■□□□□ 0.03
CACNA1A-250ENST00000637809 ZNF333Q96JL9 665 aa15.24■□□□□ 0.03
CACNA1A-250ENST00000637809 WRNIP1Q96S55 665 aa15.24■□□□□ 0.03
CACNA1A-250ENST00000637809 ZFYVE28Q9HCC9 887 aa15.24■□□□□ 0.03
CACNA1A-250ENST00000637809 HHIPL2Q6UWX4 724 aa15.23■□□□□ 0.03
CACNA1A-250ENST00000637809 ERO1BQ86YB8 467 aa15.23■□□□□ 0.03
CACNA1A-250ENST00000637809 ZKSCAN4Q969J2 545 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-250ENST00000637809 PTCH2Q9Y6C5 1203 aa15.23■□□□□ 0.03
CACNA1A-250ENST00000637809 RPAP1Q9BWH6 1393 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-250ENST00000637809 MAST3O60307 1309 aa15.22■□□□□ 0.03
CACNA1A-250ENST00000637809 BTBD19C9JJ37 291 aa15.22■□□□□ 0.03
CACNA1A-250ENST00000637809 IRF6O14896 467 aa15.22■□□□□ 0.03
CACNA1A-250ENST00000637809 TLR2O60603 784 aa15.22■□□□□ 0.03
CACNA1A-250ENST00000637809 IFIT1P09914 478 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-250ENST00000637809 CETPP11597 493 aa15.22■□□□□ 0.03
CACNA1A-250ENST00000637809 ZCCHC17Q9NP64 241 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-250ENST00000637809 TMOD2Q9NZR1 351 aa15.22■□□□□ 0.03
CACNA1A-250ENST00000637809 E9PSI1 815 aa15.21■□□□□ 0.03
CACNA1A-250ENST00000637809 EYA2O00167 538 aa15.21■□□□□ 0.03
CACNA1A-250ENST00000637809 PPIL2Q13356 520 aa15.21■□□□□ 0.03
CACNA1A-250ENST00000637809 SNAPC2Q13487 334 aa15.21■□□□□ 0.03
CACNA1A-250ENST00000637809 ATG9AQ7Z3C6 839 aa15.21■□□□□ 0.03
CACNA1A-250ENST00000637809 LPIN2Q92539 896 aa15.21■□□□□ 0.03
CACNA1A-250ENST00000637809 GCC1Q96CN9 775 aa15.21■□□□□ 0.03
CACNA1A-250ENST00000637809 ARHGAP39Q9C0H5 1083 aa15.21■□□□□ 0.03
CACNA1A-250ENST00000637809 INPP5BP32019 993 aa15.2■□□□□ 0.02
CACNA1A-250ENST00000637809 ARHGEF6Q15052 776 aa15.2■□□□□ 0.02
CACNA1A-250ENST00000637809 MIGA2Q7L4E1 593 aa15.2■□□□□ 0.02
CACNA1A-250ENST00000637809 WDR66Q8TBY9 1149 aa15.2■□□□□ 0.02
CACNA1A-250ENST00000637809 HOOK2Q96ED9 719 aa15.2■□□□□ 0.02
CACNA1A-250ENST00000637809 DAGLAQ9Y4D2 1042 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms