RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 SLC52A2Q9HAB3 445 aa23.35■■□□□ 1.33
CACNA1A-243ENST00000637616 LRP10Q7Z4F1 713 aa23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 REXO1L1PQ8IX06 675 aa23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 FANCLQ9NW38 375 aa23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 ZRANB2O95218 330 aaKnown RBP eCLIP23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 YEATS4O95619 227 aa23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 GNL2Q13823 731 aaKnown RBP23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 PDILTQ8N807 584 aa23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 MYH15Q9Y2K3 1946 aa23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 SYKP43405 635 aa23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 STK11IPQ8N1F8 1099 aa23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 THEMISQ8N1K5 641 aaPredicted RBP23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 PUS3Q9BZE2 481 aaKnown RBP23.34■■□□□ 1.33
CACNA1A-243ENST00000637616 EVCP57679 992 aa23.33■■□□□ 1.33
CACNA1A-243ENST00000637616 ST5P78524 1137 aa23.33■■□□□ 1.33
CACNA1A-243ENST00000637616 PARP3Q9Y6F1 533 aa23.33■■□□□ 1.33
CACNA1A-243ENST00000637616 SASH3O75995 380 aa23.33■■□□□ 1.32
CACNA1A-243ENST00000637616 KIF23Q02241 960 aaPredicted RBP23.33■■□□□ 1.32
CACNA1A-243ENST00000637616 SPECC1Q5M775 1068 aa23.33■■□□□ 1.32
CACNA1A-243ENST00000637616 NKX2-3Q8TAU0 364 aa23.33■■□□□ 1.32
CACNA1A-243ENST00000637616 TADA3O75528 432 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 GYS2P54840 703 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 CCDC85AQ96PX6 553 aaPredicted RBP23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 WDR24Q96S15 920 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 FOXP2O15409 715 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 FGAP02671 866 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 CMA1P23946 247 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 FOXO4P98177 505 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 NLRP2Q9NX02 1062 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 RFX7Q2KHR2 1363 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 ABCC6O95255 1503 aa23.32■■□□□ 1.32
CACNA1A-243ENST00000637616 A0A1B0GUL7 405 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 FOXN1O15353 648 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 TOP1P11387 765 aaKnown RBP23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 ARGLU1Q9NWB6 273 aaPredicted RBP23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 CASP7P55210 303 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 TEX35Q5T0J7 233 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 SHC4Q6S5L8 630 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 CALCOCO1Q9P1Z2 691 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 PHLPP2Q6ZVD8 1323 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 VWA3AA6NCI4 1184 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 ANTXR2P58335 489 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 ZSWIM4Q9H7M6 989 aa23.31■■□□□ 1.32
CACNA1A-243ENST00000637616 UBE2Q2LH0YL09 131 aa23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 CDK11BP21127 795 aaKnown RBP23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 CDC27P30260 824 aa23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 GNG11P61952 73 aa23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 TTC5Q8N0Z6 440 aa23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 CAPN2P17655 700 aa23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 ADKP55263 362 aaKnown RBP23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 MYL5Q02045 173 aa23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 PDE4BQ07343 736 aa23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 PI16Q6UXB8 463 aa23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 FOXP4Q8IVH2 680 aaPredicted RBP23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 PHKBQ93100 1093 aa23.3■■□□□ 1.32
CACNA1A-243ENST00000637616 PPP2R2CQ9Y2T4 447 aa23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 TRHP20396 242 aaPredicted RBP23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 RAPGEF4Q8WZA2 1011 aa23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 INTS13Q9NVM9 706 aa23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 IKBKBO14920 756 aa23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 SNRPA1P09661 255 aaKnown RBP23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 ADORA1P30542 326 aa23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 IMMTQ16891 758 aaKnown RBP23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 LONRF3Q496Y0 759 aa23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 BRAPQ7Z569 592 aa23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 DESI2Q9BSY9 194 aa23.29■■□□□ 1.32
CACNA1A-243ENST00000637616 KCNJ6P48051 423 aa23.28■■□□□ 1.32
CACNA1A-243ENST00000637616 SLC39A14Q15043 492 aa23.28■■□□□ 1.32
CACNA1A-243ENST00000637616 TOGARAM2Q6ZUX3 1019 aa23.28■■□□□ 1.32
CACNA1A-243ENST00000637616 VSTM4Q8IW00 320 aa23.28■■□□□ 1.32
CACNA1A-243ENST00000637616 SMARCE1Q969G3 411 aa23.28■■□□□ 1.32
CACNA1A-243ENST00000637616 PUS7LQ9H0K6 701 aaKnown RBP23.28■■□□□ 1.32
CACNA1A-243ENST00000637616 LRRFIP1Q32MZ4 808 aaKnown RBP23.28■■□□□ 1.32
CACNA1A-243ENST00000637616 IRX2Q9BZI1 471 aaPredicted RBP23.27■■□□□ 1.32
CACNA1A-243ENST00000637616 TBC1D8O95759 1140 aa23.27■■□□□ 1.32
CACNA1A-243ENST00000637616 SCARF1Q14162 830 aa23.27■■□□□ 1.32
CACNA1A-243ENST00000637616 VPS37DQ86XT2 251 aa23.27■■□□□ 1.32
CACNA1A-243ENST00000637616 SENP2Q9HC62 589 aa23.27■■□□□ 1.32
CACNA1A-243ENST00000637616 DHX16O60231 1041 aaKnown RBP23.27■■□□□ 1.31
CACNA1A-243ENST00000637616 OAS2P29728 719 aaKnown RBP23.27■■□□□ 1.31
CACNA1A-243ENST00000637616 KARSQ15046 597 aaKnown RBP23.27■■□□□ 1.31
CACNA1A-243ENST00000637616 TTLL7Q6ZT98 887 aa23.27■■□□□ 1.31
CACNA1A-243ENST00000637616 METTL16Q86W50 562 aaKnown RBP23.27■■□□□ 1.31
CACNA1A-243ENST00000637616 TMEM139Q8IV31 216 aa23.27■■□□□ 1.31
CACNA1A-243ENST00000637616 ALG1Q9BT22 464 aa23.27■■□□□ 1.31
CACNA1A-243ENST00000637616 PCDHA5Q9Y5H7 936 aa23.27■■□□□ 1.31
CACNA1A-243ENST00000637616 EFCAB8A8MWE9 144 aa23.26■■□□□ 1.31
CACNA1A-243ENST00000637616 BMP6P22004 513 aa23.26■■□□□ 1.31
CACNA1A-243ENST00000637616 RALYLQ86SE5 291 aaKnown RBP23.26■■□□□ 1.31
CACNA1A-243ENST00000637616 MB21D2Q8IYB1 491 aaPredicted RBP23.26■■□□□ 1.31
CACNA1A-243ENST00000637616 TUBE1Q9UJT0 475 aa23.26■■□□□ 1.31
CACNA1A-243ENST00000637616 KDM6AO15550 1401 aaPredicted RBP23.26■■□□□ 1.31
CACNA1A-243ENST00000637616 CASQ1P31415 396 aa23.26■■□□□ 1.31
CACNA1A-243ENST00000637616 ZNF827Q17R98 1081 aa23.26■■□□□ 1.31
CACNA1A-243ENST00000637616 PHKG2P15735 406 aa23.25■■□□□ 1.31
CACNA1A-243ENST00000637616 TRMT44Q8IYL2 757 aaKnown RBP23.25■■□□□ 1.31
CACNA1A-243ENST00000637616 CC2D1AQ6P1N0 951 aaPredicted RBP23.25■■□□□ 1.31
CACNA1A-243ENST00000637616 ZBTB3Q9H5J0 574 aa23.25■■□□□ 1.31
CACNA1A-243ENST00000637616 CCP110O43303 1012 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms