RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 DPP8Q6V1X1 898 aaPredicted RBP9.83□□□□□ -0.84
CACNA1A-232ENST00000636966 TDRD7Q8NHU6 1098 aaKnown RBP9.83□□□□□ -0.84
CACNA1A-232ENST00000636966 PUS7LQ9H0K6 701 aaKnown RBP9.83□□□□□ -0.84
CACNA1A-232ENST00000636966 CD209Q9NNX6 404 aa9.83□□□□□ -0.84
CACNA1A-232ENST00000636966 TAF6LQ9Y6J9 622 aa9.83□□□□□ -0.84
CACNA1A-232ENST00000636966 C6orf229H3BNL8 230 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 PRDX5P30044 214 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 PTH1RQ03431 593 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 VPS53Q5VIR6 699 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 TNPO1Q92973 898 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 CNKSR1Q969H4 720 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 SPON1Q9HCB6 807 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 BRPF3Q9ULD4 1205 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 CD2APQ9Y5K6 639 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 MED23Q9ULK4 1368 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 TIAM2Q8IVF5 1701 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 M0R2C6 588 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 SGSM2O43147 1006 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 IL1R1P14778 569 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 AOC3Q16853 763 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 FSD1Q9BTV5 496 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 DDX49Q9Y6V7 483 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 YDJCA8MPS7 323 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 NFKBIEO00221 500 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 ATP2B4P23634 1241 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 SKOR2Q2VWA4 1001 aaPredicted RBP9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 IL17RAQ96F46 866 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 DBNDD1Q9H9R9 158 aa9.82□□□□□ -0.84
CACNA1A-232ENST00000636966 TPRNQ4KMQ1 711 aa9.81□□□□□ -0.84
CACNA1A-232ENST00000636966 CERS5Q8N5B7 392 aa9.81□□□□□ -0.84
CACNA1A-232ENST00000636966 ZNF277Q9NRM2 450 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-232ENST00000636966 PIM2Q9P1W9 311 aa9.81□□□□□ -0.84
CACNA1A-232ENST00000636966 ADAMTSL1Q8N6G6 1762 aa9.81□□□□□ -0.84
CACNA1A-232ENST00000636966 CAVIN4Q5BKX8 364 aa9.81□□□□□ -0.84
CACNA1A-232ENST00000636966 LSG1Q9H089 658 aaKnown RBP9.81□□□□□ -0.84
CACNA1A-232ENST00000636966 PALD1Q9ULE6 856 aa9.81□□□□□ -0.84
CACNA1A-232ENST00000636966 GREB1LQ9C091 1923 aaPredicted RBP9.81□□□□□ -0.84
CACNA1A-232ENST00000636966 MCTP1Q6DN14 999 aa9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 TMC4Q7Z404 712 aa9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 SYT17Q9BSW7 474 aa9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 MAST3O60307 1309 aa9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 MCM2P49736 904 aa9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 VASPP50552 380 aaPredicted RBP9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 UPF3BQ9BZI7 483 aaKnown RBP9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 UQCRFS1P1P0C7P4 283 aa9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 ADD2P35612 726 aa9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 SLC9C2Q5TAH2 1124 aa9.8□□□□□ -0.84
CACNA1A-232ENST00000636966 SMIM22K7EJ46 135 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 IDH1O75874 414 aaKnown RBP9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 CHAF1AQ13111 956 aaPredicted RBP9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 ZMYM1Q5SVZ6 1142 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 VPS37DQ86XT2 251 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 CWC22Q9HCG8 908 aaKnown RBP9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 CD2BP2O95400 341 aaKnown RBP9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 PDE6AP16499 860 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 YBX3P16989 372 aaKnown RBP eCLIP9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 TICAM2Q86XR7 235 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 ABCF2Q9UG63 623 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 PCDHAC2Q9Y5I4 1007 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 ZNF532Q9HCE3 1301 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 SBF1O95248 1867 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 RASSF7Q02833 373 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 EVX2Q03828 476 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 FOXD4L6Q3SYB3 417 aaPredicted RBP9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 DALRD3Q5D0E6 543 aaKnown RBP9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 FOXD4L3Q6VB84 417 aaPredicted RBP9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 BCS1LQ9Y276 419 aa9.79□□□□□ -0.84
CACNA1A-232ENST00000636966 RNF113AO15541 343 aaKnown RBP9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 MECOMQ03112 1051 aa9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 MAGEB6Q8N7X4 407 aa9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 NSUN4Q96CB9 384 aaKnown RBP9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 TRIM44Q96DX7 344 aaPredicted RBP9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 SOCS7O14512 581 aa9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 KIAA2012Q0VF49 1180 aa9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 IFNLR1Q8IU57 520 aaPredicted RBP9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 ZKSCAN1P17029 563 aaPredicted RBP9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 GTF2IP78347 998 aa9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 DIXDC1Q155Q3 683 aa9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 RASEFQ8IZ41 740 aa9.78□□□□□ -0.84
CACNA1A-232ENST00000636966 PSMD1Q99460 953 aa9.77□□□□□ -0.84
CACNA1A-232ENST00000636966 ZC3H12CQ9C0D7 883 aaKnown RBP9.77□□□□□ -0.84
CACNA1A-232ENST00000636966 DENND2AQ9ULE3 1009 aa9.77□□□□□ -0.84
CACNA1A-232ENST00000636966 LOC285556D6RIA3 1793 aa9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 PDS5AQ29RF7 1337 aaKnown RBP9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 ECE2O60344 883 aa9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 RAB3GAP1Q15042 981 aa9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 ZNF804AQ7Z570 1209 aa9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 MIGA1Q8NAN2 632 aa9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 RFX7Q2KHR2 1363 aa9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 PRKAB2O43741 272 aa9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 CCDC93Q567U6 631 aa9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 COA1Q9GZY4 146 aa9.77□□□□□ -0.85
CACNA1A-232ENST00000636966 SPDYE2BA6NHP3 402 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 SPDYE6P0CI01 402 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 SPDYE2Q495Y8 402 aa9.76□□□□□ -0.85
CACNA1A-232ENST00000636966 RIOK1Q9BRS2 568 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms