RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 GPAA1O43292 621 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 GYG1P46976 350 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 KRT32Q14532 448 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 GPT2Q8TD30 523 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 ZNF512BQ96KM6 892 aaPredicted RBP13.59□□□□□ -0.23
CLN6-217ENST00000636964 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 GOLGA6L22H0YM25 854 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 BRD1O95696 1058 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 ADD2P35612 726 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 UTP14CQ5TAP6 766 aaKnown RBP13.59□□□□□ -0.23
CLN6-217ENST00000636964 Q6ZUG5 572 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 CCDC94Q9BW85 323 aaPredicted RBP13.59□□□□□ -0.23
CLN6-217ENST00000636964 MINPP1Q9UNW1 487 aa13.59□□□□□ -0.23
CLN6-217ENST00000636964 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
CLN6-217ENST00000636964 RTL9Q8NET4 1388 aa13.58□□□□□ -0.24
CLN6-217ENST00000636964 TTF1Q15361 905 aaPredicted RBP13.58□□□□□ -0.24
CLN6-217ENST00000636964 SLC10A5Q5PT55 438 aa13.58□□□□□ -0.24
CLN6-217ENST00000636964 SLC51AQ86UW1 340 aa13.58□□□□□ -0.24
CLN6-217ENST00000636964 ZSCAN31Q96LW9 406 aaPredicted RBP13.58□□□□□ -0.24
CLN6-217ENST00000636964 NSFL1CQ9UNZ2 370 aaKnown RBP13.58□□□□□ -0.24
CLN6-217ENST00000636964 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
CLN6-217ENST00000636964 FGAP02671 866 aa13.58□□□□□ -0.24
CLN6-217ENST00000636964 GJB2P29033 226 aa13.58□□□□□ -0.24
CLN6-217ENST00000636964 NFIXQ14938 502 aa13.58□□□□□ -0.24
CLN6-217ENST00000636964 LRP5O75197 1615 aa13.58□□□□□ -0.24
CLN6-217ENST00000636964 E7EWF7 191 aa13.57□□□□□ -0.24
CLN6-217ENST00000636964 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
CLN6-217ENST00000636964 PDE6AP16499 860 aa13.57□□□□□ -0.24
CLN6-217ENST00000636964 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
CLN6-217ENST00000636964 ZNF622Q969S3 477 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLN6-217ENST00000636964 BSDC1Q9NW68 430 aaPredicted RBP13.57□□□□□ -0.24
CLN6-217ENST00000636964 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
CLN6-217ENST00000636964 SASS6Q6UVJ0 657 aa13.57□□□□□ -0.24
CLN6-217ENST00000636964 MAGEB6Q8N7X4 407 aa13.57□□□□□ -0.24
CLN6-217ENST00000636964 SH2B1Q9NRF2 756 aaPredicted RBP13.57□□□□□ -0.24
CLN6-217ENST00000636964 BRF1Q92994 677 aa13.57□□□□□ -0.24
CLN6-217ENST00000636964 TAF1LQ8IZX4 1826 aa13.56□□□□□ -0.24
CLN6-217ENST00000636964 SYT1P21579 422 aa13.56□□□□□ -0.24
CLN6-217ENST00000636964 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
CLN6-217ENST00000636964 LY75O60449 1722 aa13.56□□□□□ -0.24
CLN6-217ENST00000636964 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
CLN6-217ENST00000636964 ANKRD1Q15327 319 aa13.56□□□□□ -0.24
CLN6-217ENST00000636964 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
CLN6-217ENST00000636964 KLRK1P26718 216 aa13.56□□□□□ -0.24
CLN6-217ENST00000636964 ABCF2Q9UG63 623 aa13.56□□□□□ -0.24
CLN6-217ENST00000636964 PSMD1Q99460 953 aa13.55□□□□□ -0.24
CLN6-217ENST00000636964 GDPD2Q9HCC8 539 aa13.55□□□□□ -0.24
CLN6-217ENST00000636964 DHX32Q7L7V1 743 aaKnown RBP13.55□□□□□ -0.24
CLN6-217ENST00000636964 VPS37DQ86XT2 251 aa13.55□□□□□ -0.24
CLN6-217ENST00000636964 TMEM63CQ9P1W3 806 aa13.55□□□□□ -0.24
CLN6-217ENST00000636964 LRP2BPQ9P2M1 347 aa13.55□□□□□ -0.24
CLN6-217ENST00000636964 TCRBV5S4A2TA0A5A2 114 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 STX6O43752 255 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 MAP3K12Q12852 859 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 UBE3CQ15386 1083 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 IMMTQ16891 758 aaKnown RBP13.54□□□□□ -0.24
CLN6-217ENST00000636964 PROM2Q8N271 834 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 AIDAQ96BJ3 306 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 TFCP2L1Q9NZI6 479 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 LAMB2P55268 1798 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 PPFIA3O75145 1194 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 GPHNQ9NQX3 736 aaPredicted RBP13.54□□□□□ -0.24
CLN6-217ENST00000636964 BRWD3Q6RI45 1802 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 WDR33Q9C0J8 1336 aaKnown RBP13.54□□□□□ -0.24
CLN6-217ENST00000636964 TM4SF1P30408 202 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 MTERF4Q7Z6M4 381 aaKnown RBP13.54□□□□□ -0.24
CLN6-217ENST00000636964 CNBD1Q8NA66 436 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 MIGA1Q8NAN2 632 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 ARMT1Q9H993 441 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 CTNNA3Q9UI47 895 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 DENND2AQ9ULE3 1009 aa13.54□□□□□ -0.24
CLN6-217ENST00000636964 RGL2O15211 777 aa13.53□□□□□ -0.24
CLN6-217ENST00000636964 ALDH8A1Q9H2A2 487 aaPredicted RBP13.53□□□□□ -0.24
CLN6-217ENST00000636964 VPS37CA5D8V6 355 aaPredicted RBP13.53□□□□□ -0.24
CLN6-217ENST00000636964 ZNF213O14771 459 aa13.53□□□□□ -0.24
CLN6-217ENST00000636964 MBD4O95243 580 aa13.53□□□□□ -0.24
CLN6-217ENST00000636964 GYS1P13807 737 aa13.53□□□□□ -0.24
CLN6-217ENST00000636964 UBE4AQ14139 1066 aa13.53□□□□□ -0.24
CLN6-217ENST00000636964 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
CLN6-217ENST00000636964 FAM84BQ96KN1 310 aaPredicted RBP13.53□□□□□ -0.24
CLN6-217ENST00000636964 MYH7P12883 1935 aa13.53□□□□□ -0.24
CLN6-217ENST00000636964 EXOSC10Q01780 885 aaKnown RBP13.52□□□□□ -0.24
CLN6-217ENST00000636964 CAVIN4Q5BKX8 364 aa13.52□□□□□ -0.24
CLN6-217ENST00000636964 JAG2Q9Y219 1238 aa13.52□□□□□ -0.24
CLN6-217ENST00000636964 JAK2O60674 1132 aa13.52□□□□□ -0.24
CLN6-217ENST00000636964 ZSCAN22P10073 491 aaPredicted RBP13.52□□□□□ -0.24
CLN6-217ENST00000636964 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.24
CLN6-217ENST00000636964 STRBPQ96SI9 672 aaKnown RBP13.52□□□□□ -0.24
CLN6-217ENST00000636964 INCENPQ9NQS7 918 aa13.52□□□□□ -0.24
CLN6-217ENST00000636964 PRKAB2O43741 272 aa13.52□□□□□ -0.25
CLN6-217ENST00000636964 CBX1P83916 185 aa13.52□□□□□ -0.25
CLN6-217ENST00000636964 LARP1BQ659C4 914 aaKnown RBP13.52□□□□□ -0.25
CLN6-217ENST00000636964 PRR5LQ6MZQ0 368 aa13.52□□□□□ -0.25
CLN6-217ENST00000636964 STK11IPQ8N1F8 1099 aa13.52□□□□□ -0.25
CLN6-217ENST00000636964 MYRIPQ8NFW9 859 aa13.52□□□□□ -0.25
CLN6-217ENST00000636964 RAI14Q9P0K7 980 aa13.52□□□□□ -0.25
CLN6-217ENST00000636964 CASZ1Q86V15 1759 aa13.52□□□□□ -0.25
CLN6-217ENST00000636964 CARMIL3Q8ND23 1372 aa13.52□□□□□ -0.25
CLN6-217ENST00000636964 C4AP0C0L4 1744 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms