RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CHMP3Q9Y3E7 222 aa8.31□□□□□ -1.08
UPF3B-205ENST00000636792 LTBP3Q9NS15 1303 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 PNMA6EA0A0J9YXQ4 647 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 POTECB2RU33 542 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 EYA2O00167 538 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 PPEF1O14829 653 aaPredicted RBP8.3□□□□□ -1.08
UPF3B-205ENST00000636792 TLL1O43897 1013 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 S1PR4O95977 384 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 DNAJB2P25686 324 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 PRPF40BQ6NWY9 871 aaKnown RBP8.3□□□□□ -1.08
UPF3B-205ENST00000636792 LDHAL6AQ6ZMR3 332 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 SP8Q8IXZ3 490 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 SPRYD3Q8NCJ5 442 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 DCTPP1Q9H773 170 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 PPP4R2Q9NY27 417 aa8.3□□□□□ -1.08
UPF3B-205ENST00000636792 XDHP47989 1333 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 ZNF609O15014 1411 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 TNFRSF10AO00220 468 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 KCNA3P22001 575 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 G3BP1Q13283 466 aaKnown RBP eCLIP8.29□□□□□ -1.08
UPF3B-205ENST00000636792 CCDC93Q567U6 631 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 DALRD3Q5D0E6 543 aaKnown RBP8.29□□□□□ -1.08
UPF3B-205ENST00000636792 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 CENPQQ7L2Z9 268 aaPredicted RBP8.29□□□□□ -1.08
UPF3B-205ENST00000636792 SMC5Q8IY18 1101 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 RTKN2Q8IZC4 609 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 SUPT20HQ8NEM7 779 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 ZNF622Q969S3 477 aaKnown RBP eCLIP8.29□□□□□ -1.089e-7■■□□□ 13.9
UPF3B-205ENST00000636792 KIF1BPQ96EK5 621 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 SYT17Q9BSW7 474 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 FHDC1Q9C0D6 1143 aaPredicted RBP8.29□□□□□ -1.08
UPF3B-205ENST00000636792 C1orf115Q9H7X2 142 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 AKAP2Q9Y2D5 859 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 LEMD3Q9Y2U8 911 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 ATP6V0A2Q9Y487 856 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 COL4A1P02462 1669 aa8.29□□□□□ -1.08
UPF3B-205ENST00000636792 MED23Q9ULK4 1368 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 GDF9O60383 454 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 IGSF3O75054 1194 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 DPEP1P16444 411 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 UBE4AQ14139 1066 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 TREML4Q6UXN2 200 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 C15orf52Q6ZUT6 534 aaKnown RBP8.28□□□□□ -1.08
UPF3B-205ENST00000636792 SIRT2Q8IXJ6 389 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 C7orf43Q8WVR3 580 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 JARID2Q92833 1246 aaPredicted RBP8.28□□□□□ -1.08
UPF3B-205ENST00000636792 CELF1Q92879 486 aaKnown RBP8.28□□□□□ -1.08
UPF3B-205ENST00000636792 PSMD1Q99460 953 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 RTFDC1Q9BY42 306 aaPredicted RBP8.28□□□□□ -1.08
UPF3B-205ENST00000636792 SEC31BQ9NQW1 1179 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 CNNM1Q9NRU3 951 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 RIPOR2Q9Y4F9 1068 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 SBF1O95248 1867 aa8.28□□□□□ -1.08
UPF3B-205ENST00000636792 CHD4Q14839 1912 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 TIAM2Q8IVF5 1701 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 ACTN4O43707 911 aaKnown RBP8.27□□□□□ -1.09
UPF3B-205ENST00000636792 SURF6O75683 361 aaKnown RBP8.27□□□□□ -1.09
UPF3B-205ENST00000636792 PDE8BO95263 885 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 ATP2B4P23634 1241 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 CHRNA5P30532 468 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 OS9Q13438 667 aaPredicted RBP8.27□□□□□ -1.09
UPF3B-205ENST00000636792 PUM3Q15397 648 aaKnown RBP8.27□□□□□ -1.09
UPF3B-205ENST00000636792 ATG9AQ7Z3C6 839 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 CLASRPQ8N2M8 674 aaKnown RBP8.27□□□□□ -1.09
UPF3B-205ENST00000636792 VGLL2Q8N8G2 317 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 RBM46Q8TBY0 533 aaKnown RBP8.27□□□□□ -1.09
UPF3B-205ENST00000636792 CCDC136Q96JN2 1154 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 EYA3Q99504 573 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 LRRCC1Q9C099 1032 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 CEP126Q9P2H0 1117 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 MINPP1Q9UNW1 487 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 KDM2BQ8NHM5 1336 aa8.27□□□□□ -1.09
UPF3B-205ENST00000636792 CCDC88AQ3V6T2 1871 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 A0A0G2JLW4 131 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 GRIN3BO60391 1043 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 NR1I2O75469 434 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 ADH1BP00325 375 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 IRX6P78412 446 aaPredicted RBP8.26□□□□□ -1.09
UPF3B-205ENST00000636792 CHRNDQ07001 517 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 METTL24Q5JXM2 366 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 CCDC24Q8N4L8 307 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 RHPN1Q8TCX5 695 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 LPIN2Q92539 896 aa8.26□□□□□ -1.09
UPF3B-205ENST00000636792 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.26□□□□□ -1.09
UPF3B-205ENST00000636792 PDS5AQ29RF7 1337 aaKnown RBP8.26□□□□□ -1.09
UPF3B-205ENST00000636792 ZC3H4Q9UPT8 1303 aaKnown RBP8.26□□□□□ -1.09
UPF3B-205ENST00000636792 MAST2Q6P0Q8 1798 aa8.25□□□□□ -1.09
UPF3B-205ENST00000636792 ZNF646O15015 1829 aaPredicted RBP8.25□□□□□ -1.09
UPF3B-205ENST00000636792 DOCK2Q92608 1830 aa8.25□□□□□ -1.09
UPF3B-205ENST00000636792 SEMA3EO15041 775 aa8.25□□□□□ -1.09
UPF3B-205ENST00000636792 IFIT1P09914 478 aaKnown RBP8.25□□□□□ -1.09
UPF3B-205ENST00000636792 SLC5A1P13866 664 aa8.25□□□□□ -1.09
UPF3B-205ENST00000636792 FGFR2P21802 821 aa8.25□□□□□ -1.09
UPF3B-205ENST00000636792 FKBP4Q02790 459 aaKnown RBP eCLIP8.25□□□□□ -1.09
UPF3B-205ENST00000636792 ATP2B3Q16720 1220 aa8.25□□□□□ -1.09
UPF3B-205ENST00000636792 DPP8Q6V1X1 898 aaPredicted RBP8.25□□□□□ -1.09
UPF3B-205ENST00000636792 MPNDQ8N594 471 aa8.25□□□□□ -1.09
UPF3B-205ENST00000636792 NLGN2Q8NFZ4 835 aa8.25□□□□□ -1.09
UPF3B-205ENST00000636792 GPATCH3Q96I76 525 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms