RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 EVCP57679 992 aa17.34■□□□□ 0.37
THUMPD1-206ENST00000636554 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
THUMPD1-206ENST00000636554 CFAP100Q494V2 611 aa17.34■□□□□ 0.37
THUMPD1-206ENST00000636554 SYNE3Q6ZMZ3 975 aa17.34■□□□□ 0.37
THUMPD1-206ENST00000636554 ORAI2Q96SN7 254 aa17.34■□□□□ 0.37
THUMPD1-206ENST00000636554 TMX1Q9H3N1 280 aa17.34■□□□□ 0.37
THUMPD1-206ENST00000636554 TADA3O75528 432 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 SERPINC1P01008 464 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 GTF2E1P29083 439 aaPredicted RBP17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 PNOCQ13519 176 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 HSP90AA4PQ58FG1 418 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 REXO1L1PQ8IX06 675 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 MNS1Q8NEH6 495 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 BBXQ8WY36 941 aaPredicted RBP17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 TIGD1Q96MW7 591 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 PARP3Q9Y6F1 533 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 IKBKBO14920 756 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 POLR3GO15318 223 aaPredicted RBP17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 CMA1P23946 247 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 ANTXR2P58335 489 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 TMCO3Q6UWJ1 677 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 BRAPQ7Z569 592 aa17.33■□□□□ 0.36
THUMPD1-206ENST00000636554 SLIT3O75094 1523 aa17.32■□□□□ 0.36
THUMPD1-206ENST00000636554 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
THUMPD1-206ENST00000636554 FKBP4Q02790 459 aaKnown RBP eCLIP17.32■□□□□ 0.36
THUMPD1-206ENST00000636554 CPLX1O14810 134 aa17.32■□□□□ 0.36
THUMPD1-206ENST00000636554 SNRPA1P09661 255 aaKnown RBP17.32■□□□□ 0.36
THUMPD1-206ENST00000636554 SYKP43405 635 aa17.32■□□□□ 0.36
THUMPD1-206ENST00000636554 DENND2AQ9ULE3 1009 aa17.32■□□□□ 0.36
THUMPD1-206ENST00000636554 VWA3AA6NCI4 1184 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 PHKG2P15735 406 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 SHC4Q6S5L8 630 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 MB21D2Q8IYB1 491 aaPredicted RBP17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 SASH3O75995 380 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 RXRAP19793 462 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 MYL5Q02045 173 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 WASHC4Q2M389 1173 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 TRERF1Q96PN7 1200 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 PUS3Q9BZE2 481 aaKnown RBP17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 INTS13Q9NVM9 706 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 ARGLU1Q9NWB6 273 aaPredicted RBP17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 TUBE1Q9UJT0 475 aa17.31■□□□□ 0.36
THUMPD1-206ENST00000636554 C4AP0C0L4 1744 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 C4BP0C0L5 1744 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 FGAP02671 866 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 TMEM139Q8IV31 216 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 VSTM4Q8IW00 320 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 FBXL16Q8N461 479 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 NEK11Q8NG66 645 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 NKX2-3Q8TAU0 364 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 RAPGEF4Q8WZA2 1011 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 CLIC6Q96NY7 704 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 SLC39A14Q15043 492 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 IMMTQ16891 758 aaKnown RBP17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 WDR24Q96S15 920 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 FANCLQ9NW38 375 aa17.3■□□□□ 0.36
THUMPD1-206ENST00000636554 LMTK3Q96Q04 1460 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 TUBB4AP04350 444 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 TOP1P11387 765 aaKnown RBP17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 CDC27P30260 824 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 HNRNPH2P55795 449 aaKnown RBP17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 NLRP2Q9NX02 1062 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 CALCOCO1Q9P1Z2 691 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 MEGF6O75095 1541 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 CCP110O43303 1012 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 DHX16O60231 1041 aaKnown RBP17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 LRRFIP1Q32MZ4 808 aaKnown RBP17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 VPS37DQ86XT2 251 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 PLBD2Q8NHP8 589 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 HPSEQ9Y251 543 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 PPP2R2CQ9Y2T4 447 aa17.29■□□□□ 0.36
THUMPD1-206ENST00000636554 EFCAB8A8MWE9 144 aa17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 ADORA1P30542 326 aa17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 IL15P40933 162 aaPredicted RBP17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 METTL16Q86W50 562 aaKnown RBP17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 CCDC34Q96HJ3 373 aa17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 ZCCHC17Q9NP64 241 aaKnown RBP17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 FOXN1O15353 648 aa17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 ST5P78524 1137 aa17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 PDE4BQ07343 736 aa17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 SCARF1Q14162 830 aa17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 FOXP4Q8IVH2 680 aaPredicted RBP17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 PUS7LQ9H0K6 701 aaKnown RBP17.28■□□□□ 0.36
THUMPD1-206ENST00000636554 KIF1AQ12756 1690 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 FER1L4A9Z1Z3 1794 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 H7C1W4 665 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 EYA2O00167 538 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 TBC1D8O95759 1140 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 BMP6P22004 513 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 DHX8Q14562 1220 aaKnown RBP17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 PI16Q6UXB8 463 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 CREBRFQ8IUR6 639 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 CHMP4CQ96CF2 233 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 TJP1Q07157 1748 aa17.27■□□□□ 0.36
THUMPD1-206ENST00000636554 CBFA2T2O43439 604 aa17.27■□□□□ 0.35
THUMPD1-206ENST00000636554 CAPN2P17655 700 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms