RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 PRO3102Q9H379 93 aa9.34□□□□□ -0.91
CIITA-214ENST00000636238 VEZTQ9HBM0 779 aa9.34□□□□□ -0.91
CIITA-214ENST00000636238 WTIPA6NIX2 430 aaPredicted RBP9.33□□□□□ -0.92
CIITA-214ENST00000636238 GJB1P08034 283 aa9.33□□□□□ -0.92
CIITA-214ENST00000636238 SNAPC2Q13487 334 aa9.33□□□□□ -0.92
CIITA-214ENST00000636238 GPR153Q6NV75 609 aa9.33□□□□□ -0.92
CIITA-214ENST00000636238 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.33□□□□□ -0.92
CIITA-214ENST00000636238 UBE3BQ7Z3V4 1068 aa9.33□□□□□ -0.92
CIITA-214ENST00000636238 UBE2Q1Q7Z7E8 422 aa9.33□□□□□ -0.92
CIITA-214ENST00000636238 ERO1BQ86YB8 467 aa9.33□□□□□ -0.92
CIITA-214ENST00000636238 LINS1Q8NG48 757 aa9.33□□□□□ -0.92
CIITA-214ENST00000636238 MRIQ9BWK5 157 aa9.33□□□□□ -0.92
CIITA-214ENST00000636238 ELP3Q9H9T3 547 aa9.33□□□□□ -0.92
CIITA-214ENST00000636238 ZNF70Q9UC06 446 aaPredicted RBP9.33□□□□□ -0.92
CIITA-214ENST00000636238 IL16Q14005 1332 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 FANCIQ9NVI1 1328 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 CLRN2A0PK11 232 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 KLRK1P26718 216 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 GJA8P48165 433 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 CASP7P55210 303 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 EXOSC9Q06265 439 aaKnown RBP9.32□□□□□ -0.92
CIITA-214ENST00000636238 IFIT5Q13325 482 aaKnown RBP9.32□□□□□ -0.92
CIITA-214ENST00000636238 PPIL2Q13356 520 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 VGLL4Q14135 290 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 CHRDL2Q6WN34 429 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 C8orf58Q8NAV2 365 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 JARID2Q92833 1246 aaPredicted RBP9.32□□□□□ -0.92
CIITA-214ENST00000636238 TEPSINQ96N21 525 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 SRRDQ9UH36 339 aa9.32□□□□□ -0.92
CIITA-214ENST00000636238 RANBP2P49792 3224 aaKnown RBP9.32□□□□□ -0.92
CIITA-214ENST00000636238 ZNF646O15015 1829 aaPredicted RBP9.31□□□□□ -0.92
CIITA-214ENST00000636238 PLIN1O60240 522 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 MNX1P50219 401 aaPredicted RBP9.31□□□□□ -0.92
CIITA-214ENST00000636238 RBM5P52756 815 aaKnown RBP eCLIP9.31□□□□□ -0.92
CIITA-214ENST00000636238 RRP1P56182 461 aaKnown RBP9.31□□□□□ -0.92
CIITA-214ENST00000636238 UBXN2AP68543 259 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 CAP1Q01518 475 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 PPATQ06203 517 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 UBE4AQ14139 1066 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 CWF19L2Q2TBE0 894 aaKnown RBP9.31□□□□□ -0.92
CIITA-214ENST00000636238 ANKRD23Q86SG2 305 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 FAM83AQ86UY5 434 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 DZIP1LQ8IYY4 767 aaKnown RBP9.31□□□□□ -0.92
CIITA-214ENST00000636238 FAM43AQ8N2R8 423 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 TDRD7Q8NHU6 1098 aaKnown RBP9.31□□□□□ -0.92
CIITA-214ENST00000636238 TBC1D22AQ8WUA7 517 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 FZD1Q9UP38 647 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 SUGT1Q9Y2Z0 365 aa9.31□□□□□ -0.92
CIITA-214ENST00000636238 RPAP1Q9BWH6 1393 aaPredicted RBP9.31□□□□□ -0.92
CIITA-214ENST00000636238 BRCA2P51587 3418 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 ELL2O00472 640 aaPredicted RBP9.3□□□□□ -0.92
CIITA-214ENST00000636238 DLL1O00548 723 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 BCAR3O75815 825 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 GRK4P32298 578 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 MFSD14BQ5SR56 506 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 DCAF15Q66K64 600 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 C17orf99Q6UX52 265 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 SLC17A8Q8NDX2 589 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 DNAAF4Q8WXU2 420 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 DPF3Q92784 378 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 SHISA4Q96DD7 197 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 TRIM47Q96LD4 638 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 TMOD2Q9NZR1 351 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 RBM27Q9P2N5 1060 aaKnown RBP9.3□□□□□ -0.92
CIITA-214ENST00000636238 TTF2Q9UNY4 1162 aaKnown RBP9.3□□□□□ -0.92
CIITA-214ENST00000636238 MAST3O60307 1309 aa9.3□□□□□ -0.92
CIITA-214ENST00000636238 CENPFP49454 3210 aa9.29□□□□□ -0.92
CIITA-214ENST00000636238 BTBD19C9JJ37 291 aa9.29□□□□□ -0.92
CIITA-214ENST00000636238 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
CIITA-214ENST00000636238 ZBTB7BO15156 539 aaPredicted RBP9.29□□□□□ -0.92
CIITA-214ENST00000636238 HIBADHP31937 336 aaKnown RBP9.29□□□□□ -0.92
CIITA-214ENST00000636238 SLAIN1Q8ND83 568 aa9.29□□□□□ -0.92
CIITA-214ENST00000636238 RAET1EQ8TD07 263 aa9.29□□□□□ -0.92
CIITA-214ENST00000636238 SH3TC2Q8TF17 1288 aa9.29□□□□□ -0.92
CIITA-214ENST00000636238 SNCAIPQ9Y6H5 919 aa9.29□□□□□ -0.92
CIITA-214ENST00000636238 SLC4A2P04920 1241 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 CRKP46108 304 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 FLIIQ13045 1269 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 CCDC57Q2TAC2 916 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 LDHAL6AQ6ZMR3 332 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 PARK7Q99497 189 aaKnown RBP9.28□□□□□ -0.92
CIITA-214ENST00000636238 TDRD3Q9H7E2 651 aaKnown RBP9.28□□□□□ -0.92
CIITA-214ENST00000636238 KCNH4Q9UQ05 1017 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 RIPOR2Q9Y4F9 1068 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 PCDHAC2Q9Y5I4 1007 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 KIF16BQ96L93 1317 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 ADGRA2Q96PE1 1338 aa9.28□□□□□ -0.92
CIITA-214ENST00000636238 IRF6O14896 467 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 TAF5LO75529 589 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 FARP2O94887 1054 aaPredicted RBP9.27□□□□□ -0.93
CIITA-214ENST00000636238 CCL5P13501 91 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 BMP8BP34820 402 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 PSMC4P43686 418 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
CIITA-214ENST00000636238 FCGRTP55899 365 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 FOXO4P98177 505 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 TWISTNBQ3B726 338 aaPredicted RBP9.27□□□□□ -0.93
CIITA-214ENST00000636238 PXYLP1Q8TE99 480 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 TEKT1Q969V4 418 aa9.27□□□□□ -0.93
CIITA-214ENST00000636238 ZDHHC15Q96MV8 337 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms