RNA–Protein interactions for RNA: ENST00000636138.1

CACNA1D-208, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-208ENST00000636138 COL1A1P02452 1464 aaPredicted RBP11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 IGKV5-2P06315 115 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 CAP1Q01518 475 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 ARHGEF6Q15052 776 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 BEND3Q5T5X7 828 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 ECM29Q5VYK3 1845 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 APOBEC3FQ8IUX4 373 aaKnown RBP11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 SH3TC2Q8TF17 1288 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 DNAAF4Q8WXU2 420 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 SLC10A4Q96EP9 437 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 HTATIP2Q9BUP3 242 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 PRO3102Q9H379 93 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 FZD1Q9UP38 647 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 PCDHB15Q9Y5E8 787 aa11.22□□□□□ -0.61
CACNA1D-208ENST00000636138 A0A1W2PPC1 479 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 WTIPA6NIX2 430 aaPredicted RBP11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 NEFLP07196 543 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 LDLRAD1Q5T700 205 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 SLC4A10Q6U841 1118 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 KSR2Q6VAB6 950 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 ITPRIPQ8IWB1 547 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 SHISA4Q96DD7 197 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 CLMNQ96JQ2 1002 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 GMLQ99445 158 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 MEIS3Q99687 375 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 GGA1Q9UJY5 639 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 NR2E3Q9Y5X4 410 aa11.21□□□□□ -0.61
CACNA1D-208ENST00000636138 SPEF2Q9C093 1822 aa11.21□□□□□ -0.62
CACNA1D-208ENST00000636138 USP17L3A6NCW0 530 aa11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 USP17L4A6NCW7 530 aa11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 CWF19L2Q2TBE0 894 aaKnown RBP11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 B4GALNT3Q6L9W6 998 aa11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 USP17L1Q7RTZ2 530 aa11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 FTSJ3Q8IY81 847 aaKnown RBP11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 OGFOD1Q8N543 542 aa11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 C1orf115Q9H7X2 142 aa11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 ZBTB40Q9NUA8 1239 aa11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 SSC5DA1L4H1 1573 aa11.2□□□□□ -0.62
CACNA1D-208ENST00000636138 WNT10BO00744 389 aa11.19□□□□□ -0.62
CACNA1D-208ENST00000636138 DEFB123Q8N688 67 aa11.19□□□□□ -0.62
CACNA1D-208ENST00000636138 PLBD2Q8NHP8 589 aa11.19□□□□□ -0.62
CACNA1D-208ENST00000636138 JARID2Q92833 1246 aaPredicted RBP11.19□□□□□ -0.62
CACNA1D-208ENST00000636138 ATP5J2-PTCD1G3V325 749 aa11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 SIRT2Q8IXJ6 389 aa11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 MYD88Q99836 296 aa11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 METTL22Q9BUU2 404 aaPredicted RBP11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 USP44Q9H0E7 712 aa11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 PCDHB8Q9UN66 801 aa11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 STXBP5LQ9Y2K9 1186 aa11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 PCDHB13Q9Y5F0 798 aa11.18□□□□□ -0.62
CACNA1D-208ENST00000636138 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 PPP1R12BO60237 982 aaPredicted RBP11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 IGHDP01880 384 aa11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 CASP7P55210 303 aa11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 RPS8P62241 208 aaKnown RBP11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 TAF1CQ15572 869 aaPredicted RBP11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 Q7L0L9 218 aa11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 KAZALD1Q96I82 304 aa11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 ISCA1Q9BUE6 129 aa11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 MXD3Q9BW11 206 aa11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 WDR70Q9NW82 654 aa11.17□□□□□ -0.62
CACNA1D-208ENST00000636138 MYO3BQ8WXR4 1341 aa11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 ALPK3Q96L96 1907 aa11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 GJA5P36382 358 aa11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 KIF22Q14807 665 aa11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 SF3B3Q15393 1217 aaKnown RBP11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 RTL5Q5HYW3 569 aaPredicted RBP11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 FAM89AQ96GI7 184 aa11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 ZFYVE28Q9HCC9 887 aa11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
CACNA1D-208ENST00000636138 XDHP47989 1333 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 NBPF7P0C2Y1 421 aaPredicted RBP11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 CCT4P50991 539 aaKnown RBP11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 MTFR1Q15390 333 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 MAP3K11Q16584 847 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 EPHA10Q5JZY3 1008 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 ERICH6BQ5W0A0 696 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 PODNQ7Z5L7 613 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 LINS1Q8NG48 757 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 PTPN18Q99952 460 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 SRCIN1Q9C0H9 1055 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 DDX19BQ9UMR2 479 aa11.15□□□□□ -0.62
CACNA1D-208ENST00000636138 UTYO14607 1347 aa11.14□□□□□ -0.63
CACNA1D-208ENST00000636138 GALR2O43603 387 aaPredicted RBP11.14□□□□□ -0.63
CACNA1D-208ENST00000636138 EVI5O60447 810 aa11.14□□□□□ -0.63
CACNA1D-208ENST00000636138 ALDH1L1O75891 902 aa11.14□□□□□ -0.63
CACNA1D-208ENST00000636138 DDX58O95786 925 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms