RNA–Protein interactions for RNA: ENST00000636116.1

SYNGAP1-211, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-211ENST00000636116 ZNF333Q96JL9 665 aa9.46□□□□□ -0.9
SYNGAP1-211ENST00000636116 FAM84BQ96KN1 310 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-211ENST00000636116 TMEM106CQ9BVX2 250 aa9.46□□□□□ -0.9
SYNGAP1-211ENST00000636116 PTCH2Q9Y6C5 1203 aa9.46□□□□□ -0.9
SYNGAP1-211ENST00000636116 TRIOBPQ9H2D6 2365 aa9.46□□□□□ -0.9
SYNGAP1-211ENST00000636116 FANCIQ9NVI1 1328 aa9.46□□□□□ -0.9
SYNGAP1-211ENST00000636116 HTTP42858 3142 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 HIBADHP31937 336 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 CRKP46108 304 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 FXR1P51114 621 aaKnown RBP eCLIP9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 CACNB3P54284 484 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 TNFAIP1Q13829 316 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 SLC4A8Q2Y0W8 1093 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 SLC9C1Q4G0N8 1177 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 OTUD5Q96G74 571 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 ARHGAP39Q9C0H5 1083 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 ZFYVE28Q9HCC9 887 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 SERPINA10Q9UK55 444 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 COLQQ9Y215 455 aaPredicted RBP9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 IL16Q14005 1332 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 ECM29Q5VYK3 1845 aa9.45□□□□□ -0.9
SYNGAP1-211ENST00000636116 GRM8O00222 908 aa9.44□□□□□ -0.9
SYNGAP1-211ENST00000636116 GTF2A2P52657 109 aa9.44□□□□□ -0.9
SYNGAP1-211ENST00000636116 CHAF1AQ13111 956 aaPredicted RBP9.44□□□□□ -0.9
SYNGAP1-211ENST00000636116 UBE4AQ14139 1066 aa9.44□□□□□ -0.9
SYNGAP1-211ENST00000636116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.44□□□□□ -0.9
SYNGAP1-211ENST00000636116 SH3TC2Q8TF17 1288 aa9.44□□□□□ -0.9
SYNGAP1-211ENST00000636116 C9orf78Q9NZ63 289 aaPredicted RBP9.44□□□□□ -0.9
SYNGAP1-211ENST00000636116 OTOFQ9HC10 1997 aa9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 A0A1B0GUL6 1792 aa9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 SLC4A10Q6U841 1118 aa9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 FBXO33Q7Z6M2 555 aa9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 NBPF11Q86T75 865 aa9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 ZKSCAN4Q969J2 545 aaPredicted RBP9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 KAZALD1Q96I82 304 aa9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 SPINK5Q9NQ38 1064 aaPredicted RBP9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 RIPOR2Q9Y4F9 1068 aa9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 CSADQ9Y600 493 aa9.43□□□□□ -0.9
SYNGAP1-211ENST00000636116 BTBD19C9JJ37 291 aa9.42□□□□□ -0.9
SYNGAP1-211ENST00000636116 H0YGN5 161 aa9.42□□□□□ -0.9
SYNGAP1-211ENST00000636116 IRF6O14896 467 aa9.42□□□□□ -0.9
SYNGAP1-211ENST00000636116 TNNI2P48788 182 aa9.42□□□□□ -0.9
SYNGAP1-211ENST00000636116 ARHGEF6Q15052 776 aa9.42□□□□□ -0.9
SYNGAP1-211ENST00000636116 LRRC24Q50LG9 513 aa9.42□□□□□ -0.9
SYNGAP1-211ENST00000636116 SNCAIPQ9Y6H5 919 aa9.42□□□□□ -0.9
SYNGAP1-211ENST00000636116 LAMB1P07942 1786 aa9.42□□□□□ -0.9
SYNGAP1-211ENST00000636116 ZSWIM8A7E2V4 1837 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 SPDYE5A6NIY4 337 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 TLR2O60603 784 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 FRAT2O75474 233 aaPredicted RBP9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 NBPF7P0C2Y1 421 aaPredicted RBP9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 CETPP11597 493 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 BCAMP50895 628 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 LACTBP83111 547 aaPredicted RBP9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 MIGA2Q7L4E1 593 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 VPS37DQ86XT2 251 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 ERO1BQ86YB8 467 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 WDR63Q8IWG1 891 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 WRNIP1Q96S55 665 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 SRCIN1Q9C0H9 1055 aa9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 RBBP6Q7Z6E9 1792 aaKnown RBP9.41□□□□□ -0.9
SYNGAP1-211ENST00000636116 MKI67P46013 3256 aaKnown RBP9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 WDHD1O75717 1129 aaPredicted RBP9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 ALDH1L1O75891 902 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 CTGFP29279 349 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 INPP5BP32019 993 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 HDLBPQ00341 1268 aaKnown RBP9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 SNAPC2Q13487 334 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 KIF22Q14807 665 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 MTFR1Q15390 333 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 METTL24Q5JXM2 366 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 APOBEC3HQ6NTF7 200 aaKnown RBP9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 KLHDC4Q8TBB5 520 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 TEKT1Q969V4 418 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 BICC1Q9H694 974 aaKnown RBP9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 CPA4Q9UI42 421 aa9.4□□□□□ -0.9
SYNGAP1-211ENST00000636116 CENPFP49454 3210 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 CACNA1FO60840 1977 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 MROH5Q6ZUA9 1318 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 PSMC4P43686 418 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 PPIL2Q13356 520 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 CAVIN4Q5BKX8 364 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 C17orf99Q6UX52 265 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 ANKRD44Q8N8A2 993 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 TBC1D22AQ8WUA7 517 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 DPF3Q92784 378 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 TRIM47Q96LD4 638 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 ZDHHC15Q96MV8 337 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 MRS2Q9HD23 443 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 TMOD2Q9NZR1 351 aa9.39□□□□□ -0.91
SYNGAP1-211ENST00000636116 PDE8BO95263 885 aa9.38□□□□□ -0.91
SYNGAP1-211ENST00000636116 FMNL1O95466 1100 aaPredicted RBP9.38□□□□□ -0.91
SYNGAP1-211ENST00000636116 TCP10Q12799 353 aa9.38□□□□□ -0.91
SYNGAP1-211ENST00000636116 NCBP3Q53F19 620 aaKnown RBP9.38□□□□□ -0.91
SYNGAP1-211ENST00000636116 CHRDL2Q6WN34 429 aa9.38□□□□□ -0.91
SYNGAP1-211ENST00000636116 FAM83AQ86UY5 434 aa9.38□□□□□ -0.91
SYNGAP1-211ENST00000636116 VGLL2Q8N8G2 317 aa9.38□□□□□ -0.91
SYNGAP1-211ENST00000636116 SHISA4Q96DD7 197 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms