RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 NEUROD6Q96NK8 337 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 A0A087WZG4 1122 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 CASQ1P31415 396 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 IMMTQ16891 758 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 MUM1L1Q5H9M0 696 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 JAKMIP3Q5VZ66 844 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 OTUD7BQ6GQQ9 843 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 PPP2R2CQ9Y2T4 447 aa17.07■□□□□ 0.32
CACNA1A-220ENST00000635988 FAM237AA0A1B0GTK4 181 aa17.06■□□□□ 0.32
CACNA1A-220ENST00000635988 HPSEQ9Y251 543 aa17.06■□□□□ 0.32
CACNA1A-220ENST00000635988 KLF18A0A0U1RQI7 1052 aa17.06■□□□□ 0.32
CACNA1A-220ENST00000635988 GOLGA8BA8MQT2 603 aa17.06■□□□□ 0.32
CACNA1A-220ENST00000635988 MAP3K9P80192 1104 aa17.06■□□□□ 0.32
CACNA1A-220ENST00000635988 CC2D1AQ6P1N0 951 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-220ENST00000635988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.06■□□□□ 0.32
CACNA1A-220ENST00000635988 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
CACNA1A-220ENST00000635988 ARFGAP3Q9NP61 516 aa17.06■□□□□ 0.32
CACNA1A-220ENST00000635988 WDR19Q8NEZ3 1342 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 SPEF2Q9C093 1822 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 POLR3GO15318 223 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 IL15P40933 162 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 TMEM94Q12767 1356 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 VWA3AA6NCI4 1184 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 ZBTB22O15209 634 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 STX10O60499 249 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 GCP02774 474 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 IFIT1P09914 478 aaKnown RBP17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 LMBR1LQ6UX01 489 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 RABGGTAQ92696 567 aa17.05■□□□□ 0.32
CACNA1A-220ENST00000635988 CAMTA1Q9Y6Y1 1673 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 PRC1O43663 620 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 SNRPA1P09661 255 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 SMC1AQ14683 1233 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 LRP10Q7Z4F1 713 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 DPF2Q92785 391 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 BAG1Q99933 345 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 A0A0G2JLW4 131 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 WDHD1O75717 1129 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 ZFYP08048 801 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 CASP7P55210 303 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 PPP2R3AQ06190 1150 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 HPS5Q9UPZ3 1129 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 MRFAP1Q9Y605 127 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 MROH7-TTC4A0A0A0MT08 1334 aa17.04■□□□□ 0.32
CACNA1A-220ENST00000635988 KIF28PB7ZC32 967 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 OAS2P29728 719 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 GNG11P61952 73 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 TTLL5Q6EMB2 1281 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 TMEM139Q8IV31 216 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 ELOA2Q8IYF1 753 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 AK7Q96M32 723 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 HOOK1Q9UJC3 728 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 C5P01031 1676 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 FANCGO15287 622 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 SEC31AO94979 1220 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 CEBPAP49715 358 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 ISM2Q6H9L7 571 aa17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 RSRC2Q7L4I2 434 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 RALYLQ86SE5 291 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 MB21D2Q8IYB1 491 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-220ENST00000635988 TBX2Q13207 712 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-220ENST00000635988 CCDC102BQ68D86 513 aa17.02■□□□□ 0.32
CACNA1A-220ENST00000635988 PLBD2Q8NHP8 589 aa17.02■□□□□ 0.32
CACNA1A-220ENST00000635988 GOLGA1Q92805 767 aa17.02■□□□□ 0.32
CACNA1A-220ENST00000635988 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-220ENST00000635988 M0R2C6 588 aa17.02■□□□□ 0.31
CACNA1A-220ENST00000635988 CDKL5O76039 1030 aa17.02■□□□□ 0.31
CACNA1A-220ENST00000635988 MARCKSP29966 332 aaPredicted RBP17.02■□□□□ 0.31
CACNA1A-220ENST00000635988 TIMM10P62072 90 aa17.02■□□□□ 0.31
CACNA1A-220ENST00000635988 GPHNQ9NQX3 736 aaPredicted RBP17.02■□□□□ 0.31
CACNA1A-220ENST00000635988 FANCLQ9NW38 375 aa17.02■□□□□ 0.31
CACNA1A-220ENST00000635988 PSD3Q9NYI0 1048 aa17.02■□□□□ 0.31
CACNA1A-220ENST00000635988 CWC15Q9P013 229 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-220ENST00000635988 CAPN2P17655 700 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 GNL2Q13823 731 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 RESP18Q5W5W9 173 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 SHC4Q6S5L8 630 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 ATP5J2-PTCD1G3V325 749 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 CUTAO60888 179 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 PTCD1O75127 700 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 SASH3O75995 380 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 FOXO4P98177 505 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 RAD51AP2Q09MP3 1159 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 BRD3Q15059 726 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 CPLX2Q6PUV4 134 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 TTC5Q8N0Z6 440 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 OSBP2Q969R2 916 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 ZNF496Q96IT1 587 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 DACH1Q9UI36 760 aa17.01■□□□□ 0.31
CACNA1A-220ENST00000635988 CCDC151A5D8V7 595 aa17■□□□□ 0.31
CACNA1A-220ENST00000635988 H7C1W4 665 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms