RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 HSP90AB4PQ58FF6 505 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 CAVIN4Q5BKX8 364 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 ERC1Q8IUD2 1116 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 XAGE2Q96GT9 111 aa18.5■□□□□ 0.55
CLN8-209ENST00000635970 COL1A1P02452 1464 aaPredicted RBP18.49■□□□□ 0.55
CLN8-209ENST00000635970 ERC2O15083 957 aa18.49■□□□□ 0.55
CLN8-209ENST00000635970 CSPP1Q1MSJ5 1256 aa18.49■□□□□ 0.55
CLN8-209ENST00000635970 TLR7Q9NYK1 1049 aaKnown RBP18.49■□□□□ 0.55
CLN8-209ENST00000635970 PHKA1P46020 1223 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 GTF2IP78347 998 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 TNIP1Q15025 636 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 EAF2Q96CJ1 260 aaPredicted RBP18.48■□□□□ 0.55
CLN8-209ENST00000635970 GPBP1L1Q9HC44 474 aaPredicted RBP18.48■□□□□ 0.55
CLN8-209ENST00000635970 USP17L3A6NCW0 530 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 USP17L4A6NCW7 530 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 POTECB2RU33 542 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 SCNN1DP51172 638 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 LRSAM1Q6UWE0 723 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 USP17L1Q7RTZ2 530 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 TDRD7Q8NHU6 1098 aaKnown RBP18.48■□□□□ 0.55
CLN8-209ENST00000635970 KIF1BPQ96EK5 621 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 CCDC8Q9H0W5 538 aaPredicted RBP18.48■□□□□ 0.55
CLN8-209ENST00000635970 RRAGCQ9HB90 399 aa18.48■□□□□ 0.55
CLN8-209ENST00000635970 SHTN1A0MZ66 631 aa18.47■□□□□ 0.55
CLN8-209ENST00000635970 SMARCA5O60264 1052 aaPredicted RBP18.47■□□□□ 0.55
CLN8-209ENST00000635970 NCLP19338 710 aaKnown RBP18.47■□□□□ 0.55
CLN8-209ENST00000635970 GMPSP49915 693 aaPredicted RBP18.47■□□□□ 0.55
CLN8-209ENST00000635970 CCDC102BQ68D86 513 aa18.47■□□□□ 0.55
CLN8-209ENST00000635970 DBNDD2Q9BQY9 259 aa18.47■□□□□ 0.55
CLN8-209ENST00000635970 GPR108Q9NPR9 543 aa18.47■□□□□ 0.55
CLN8-209ENST00000635970 RAB11FIP3O75154 756 aa18.46■□□□□ 0.55
CLN8-209ENST00000635970 VIL1P09327 827 aaKnown RBP18.46■□□□□ 0.55
CLN8-209ENST00000635970 DACT2Q5SW24 774 aa18.46■□□□□ 0.55
CLN8-209ENST00000635970 TTLL5Q6EMB2 1281 aa18.46■□□□□ 0.55
CLN8-209ENST00000635970 L3MBTL3Q96JM7 780 aaPredicted RBP18.46■□□□□ 0.55
CLN8-209ENST00000635970 AACSQ86V21 672 aa18.46■□□□□ 0.55
CLN8-209ENST00000635970 DBNLQ9UJU6 430 aaKnown RBP18.46■□□□□ 0.55
CLN8-209ENST00000635970 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
CLN8-209ENST00000635970 CHAF1AQ13111 956 aaPredicted RBP18.45■□□□□ 0.54
CLN8-209ENST00000635970 STRIP1Q5VSL9 837 aa18.45■□□□□ 0.54
CLN8-209ENST00000635970 RSBN1LQ6PCB5 846 aaPredicted RBP18.45■□□□□ 0.54
CLN8-209ENST00000635970 RBSNQ9H1K0 784 aa18.45■□□□□ 0.54
CLN8-209ENST00000635970 AK9Q5TCS8 1911 aa18.45■□□□□ 0.54
CLN8-209ENST00000635970 AKAP11Q9UKA4 1901 aa18.45■□□□□ 0.54
CLN8-209ENST00000635970 EPB41L2O43491 1005 aaKnown RBP18.44■□□□□ 0.54
CLN8-209ENST00000635970 PRPF40AO75400 957 aaKnown RBP18.44■□□□□ 0.54
CLN8-209ENST00000635970 ANAPC15P60006 121 aa18.44■□□□□ 0.54
CLN8-209ENST00000635970 CERS5Q8N5B7 392 aa18.44■□□□□ 0.54
CLN8-209ENST00000635970 LRRCC1Q9C099 1032 aa18.44■□□□□ 0.54
CLN8-209ENST00000635970 EPS15P42566 896 aa18.44■□□□□ 0.54
CLN8-209ENST00000635970 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
CLN8-209ENST00000635970 MTERF4Q7Z6M4 381 aaKnown RBP18.44■□□□□ 0.54
CLN8-209ENST00000635970 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
CLN8-209ENST00000635970 INTS4Q96HW7 963 aaKnown RBP18.44■□□□□ 0.54
CLN8-209ENST00000635970 GPRC5DQ9NZD1 345 aa18.44■□□□□ 0.54
CLN8-209ENST00000635970 CCDC39Q9UFE4 941 aa18.44■□□□□ 0.54
CLN8-209ENST00000635970 MCCP23508 829 aa18.43■□□□□ 0.54
CLN8-209ENST00000635970 CLASRPQ8N2M8 674 aaKnown RBP18.43■□□□□ 0.54
CLN8-209ENST00000635970 SYAP1Q96A49 352 aaPredicted RBP18.43■□□□□ 0.54
CLN8-209ENST00000635970 ZKSCAN5Q9Y2L8 839 aa18.43■□□□□ 0.54
CLN8-209ENST00000635970 FAM205AQ6ZU69 1335 aa18.43■□□□□ 0.54
CLN8-209ENST00000635970 RASGRF1Q13972 1273 aa18.42■□□□□ 0.54
CLN8-209ENST00000635970 PI16Q6UXB8 463 aa18.42■□□□□ 0.54
CLN8-209ENST00000635970 GPT2Q8TD30 523 aa18.42■□□□□ 0.54
CLN8-209ENST00000635970 IL17RAQ96F46 866 aa18.42■□□□□ 0.54
CLN8-209ENST00000635970 ZDHHC9Q9Y397 364 aa18.42■□□□□ 0.54
CLN8-209ENST00000635970 MYO5AQ9Y4I1 1855 aaKnown RBP18.42■□□□□ 0.54
CLN8-209ENST00000635970 LMOD1P29536 600 aaPredicted RBP18.42■□□□□ 0.54
CLN8-209ENST00000635970 SCARF1Q14162 830 aa18.42■□□□□ 0.54
CLN8-209ENST00000635970 MICALL2Q8IY33 904 aa18.42■□□□□ 0.54
CLN8-209ENST00000635970 GMLQ99445 158 aa18.42■□□□□ 0.54
CLN8-209ENST00000635970 HACL1Q9UJ83 578 aa18.42■□□□□ 0.54
CLN8-209ENST00000635970 KIF3CO14782 793 aa18.41■□□□□ 0.54
CLN8-209ENST00000635970 VEGFAP15692 232 aaPredicted RBP18.41■□□□□ 0.54
CLN8-209ENST00000635970 CUL4AQ13619 759 aa18.41■□□□□ 0.54
CLN8-209ENST00000635970 MFSD14BQ5SR56 506 aa18.41■□□□□ 0.54
CLN8-209ENST00000635970 KIAA0825Q8IV33 1275 aa18.41■□□□□ 0.54
CLN8-209ENST00000635970 GNL3LQ9NVN8 582 aaKnown RBP18.41■□□□□ 0.54
CLN8-209ENST00000635970 CNOT7Q9UIV1 285 aaKnown RBP18.41■□□□□ 0.54
CLN8-209ENST00000635970 IQCA1LA6NCM1 817 aa18.41■□□□□ 0.54
CLN8-209ENST00000635970 RPS12P25398 132 aaKnown RBP18.41■□□□□ 0.54
CLN8-209ENST00000635970 ARID4AP29374 1257 aaPredicted RBP18.41■□□□□ 0.54
CLN8-209ENST00000635970 GRIK5Q16478 980 aa18.41■□□□□ 0.54
CLN8-209ENST00000635970 AGBL3Q8NEM8 1001 aa18.41■□□□□ 0.54
CLN8-209ENST00000635970 TAF1DQ9H5J8 278 aaPredicted RBP18.41■□□□□ 0.54
CLN8-209ENST00000635970 F8W031 263 aaPredicted RBP18.4■□□□□ 0.54
CLN8-209ENST00000635970 EGFRP00533 1210 aa18.4■□□□□ 0.54
CLN8-209ENST00000635970 IFIT2P09913 472 aaKnown RBP18.4■□□□□ 0.54
CLN8-209ENST00000635970 POTEIP0CG38 1075 aa18.4■□□□□ 0.54
CLN8-209ENST00000635970 POTEJP0CG39 1038 aa18.4■□□□□ 0.54
CLN8-209ENST00000635970 EPHX2P34913 555 aa18.4■□□□□ 0.54
CLN8-209ENST00000635970 MCAMP43121 646 aa18.4■□□□□ 0.54
CLN8-209ENST00000635970 PKP1Q13835 747 aa18.4■□□□□ 0.54
CLN8-209ENST00000635970 TTC39AQ5SRH9 613 aa18.4■□□□□ 0.54
CLN8-209ENST00000635970 ZGPATQ8N5A5 531 aaKnown RBP18.4■□□□□ 0.54
CLN8-209ENST00000635970 DPF2Q92785 391 aa18.4■□□□□ 0.54
CLN8-209ENST00000635970 MYO3BQ8WXR4 1341 aa18.39■□□□□ 0.54
CLN8-209ENST00000635970 BRD1O95696 1058 aa18.39■□□□□ 0.53
CLN8-209ENST00000635970 PDE1AP54750 535 aa18.39■□□□□ 0.53
CLN8-209ENST00000635970 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms