RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 ALDH1B1P30837 517 aa11.91□□□□□ -0.5
CACNA1A-216ENST00000635742 KRT32Q14532 448 aa11.91□□□□□ -0.5
CACNA1A-216ENST00000635742 BLOC1S2Q6QNY1 142 aa11.91□□□□□ -0.5
CACNA1A-216ENST00000635742 CCDC125Q86Z20 511 aa11.91□□□□□ -0.5
CACNA1A-216ENST00000635742 MIGA1Q8NAN2 632 aa11.91□□□□□ -0.5
CACNA1A-216ENST00000635742 LARP6Q9BRS8 491 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-216ENST00000635742 EPB41L4AQ9HCS5 686 aaPredicted RBP11.91□□□□□ -0.5
CACNA1A-216ENST00000635742 C6orf229H3BNL8 230 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 CYP7A1P22680 504 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 PRDX5P30044 214 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 HAND2P61296 217 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 STYK1Q6J9G0 422 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 ZGPATQ8N5A5 531 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 IL27Q8NEV9 243 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 CHD4Q14839 1912 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 TIAM2Q8IVF5 1701 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 KIF13BQ9NQT8 1826 aa11.9□□□□□ -0.5
CACNA1A-216ENST00000635742 H0YIN7 160 aa11.9□□□□□ -0.51
CACNA1A-216ENST00000635742 LARGE1O95461 756 aa11.9□□□□□ -0.51
CACNA1A-216ENST00000635742 CUL4AQ13619 759 aa11.9□□□□□ -0.51
CACNA1A-216ENST00000635742 CD209Q9NNX6 404 aa11.9□□□□□ -0.51
CACNA1A-216ENST00000635742 CHMP5Q9NZZ3 219 aa11.9□□□□□ -0.51
CACNA1A-216ENST00000635742 E7EWF7 191 aa11.89□□□□□ -0.51
CACNA1A-216ENST00000635742 PRKAB2O43741 272 aa11.89□□□□□ -0.51
CACNA1A-216ENST00000635742 MECOMQ03112 1051 aa11.89□□□□□ -0.51
CACNA1A-216ENST00000635742 UBE2Q2Q8WVN8 375 aa11.89□□□□□ -0.51
CACNA1A-216ENST00000635742 NSUN4Q96CB9 384 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-216ENST00000635742 CTNNA3Q9UI47 895 aa11.89□□□□□ -0.51
CACNA1A-216ENST00000635742 SALL1Q9NSC2 1324 aa11.89□□□□□ -0.51
CACNA1A-216ENST00000635742 APPP05067 770 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 IL1R1P14778 569 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 TOB2Q14106 344 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 GRIK5Q16478 980 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 IMMTQ16891 758 aaKnown RBP11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 NAA16Q6N069 864 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 MPNDQ8N594 471 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 SLC16A10Q8TF71 515 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 RIOK1Q9BRS2 568 aaKnown RBP11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 NBPF3Q9H094 633 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 ZMYM6O95789 1325 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 SNED1Q8TER0 1413 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 MAGEB6P1A0A0J9YX57 407 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 GSG1L2A8MUP6 293 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 PDIA4P13667 645 aaKnown RBP11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 DYNLL1P63167 89 aaKnown RBP11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 DPP8Q6V1X1 898 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 IFNL3Q8IZI9 196 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 WDR66Q8TBY9 1149 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
CACNA1A-216ENST00000635742 PATL2C9JE40 543 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-216ENST00000635742 ST3GAL1Q11201 340 aa11.87□□□□□ -0.51
CACNA1A-216ENST00000635742 ALX1Q15699 326 aa11.87□□□□□ -0.51
CACNA1A-216ENST00000635742 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
CACNA1A-216ENST00000635742 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-216ENST00000635742 SLC4A4Q9Y6R1 1079 aa11.87□□□□□ -0.51
CACNA1A-216ENST00000635742 BAZ2AQ9UIF9 1905 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-216ENST00000635742 ZBTB7AO95365 584 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 GNAT2P19087 354 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 NBR1Q14596 966 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 SDR42E1Q8WUS8 393 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 CNKSR1Q969H4 720 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 LRRC2Q9BYS8 371 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 NAPBQ9H115 298 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 ALDH8A1Q9H2A2 487 aaPredicted RBP11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 TPCN1Q9ULQ1 816 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 LAMB1P07942 1786 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 MYH2Q9UKX2 1941 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 ZNF213O14771 459 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 LDHBP07195 334 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 ME3Q16798 604 aa11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 SPTY2D1Q68D10 685 aaPredicted RBP11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 DZIP1Q86YF9 867 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 INTS4Q96HW7 963 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-216ENST00000635742 HMGB1P09429 215 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 EXOSC10Q01780 885 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 NFKBIBQ15653 356 aa11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 Q6ZUG5 572 aa11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 DHX32Q7L7V1 743 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 MB21D2Q8IYB1 491 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 NKX2-3Q8TAU0 364 aa11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 ANP32EQ9BTT0 268 aa11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 COA1Q9GZY4 146 aa11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
CACNA1A-216ENST00000635742 TDO2P48775 406 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 RAB3GAP1Q15042 981 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 DIXDC1Q155Q3 683 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 CHST3Q7LGC8 479 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 CCDC83Q8IWF9 413 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 ZSCAN31Q96LW9 406 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 SH2B1Q9NRF2 756 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 TACC3Q9Y6A5 838 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 NEDD4P46934 1319 aa11.84□□□□□ -0.51
CACNA1A-216ENST00000635742 FAM205AQ6ZU69 1335 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms