RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 SLC12A7Q9Y666 1083 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 USP31Q70CQ4 1352 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 PLEKHG2Q9H7P9 1386 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 TTF1Q15361 905 aaPredicted RBP9.95□□□□□ -0.82
PATJ-216ENST00000635214 CCDC96Q2M329 555 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 FMNL3Q8IVF7 1028 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 ANKRD24Q8TF21 1146 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 OVOS2A0A0G2JMS6 1433 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 OVOS2A0A0J9YW53 1432 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 OVOS2Q6IE36 1432 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 CCDC194A0A1B0GVG4 234 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 MACROD2A1Z1Q3 448 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 ZEB2O60315 1214 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 F13A1P00488 732 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 PTGS1P23219 599 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 IGHMBP2P38935 993 aaKnown RBP9.95□□□□□ -0.82
PATJ-216ENST00000635214 CLNS1AP54105 237 aaKnown RBP9.95□□□□□ -0.82
PATJ-216ENST00000635214 KIF5AQ12840 1032 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 LMBR1Q8WVP7 490 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 GTF3C6Q969F1 213 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 IQCGQ9H095 443 aaKnown RBP9.95□□□□□ -0.82
PATJ-216ENST00000635214 SEC63Q9UGP8 760 aaKnown RBP9.95□□□□□ -0.82
PATJ-216ENST00000635214 FEZ2Q9UHY8 353 aaPredicted RBP9.95□□□□□ -0.82
PATJ-216ENST00000635214 TTC41PQ6P2S7 1318 aa9.95□□□□□ -0.82
PATJ-216ENST00000635214 CFAP58Q5T655 872 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 SYT10Q6XYQ8 523 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 AOPEPQ8N6M6 819 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 DNAJC25Q9H1X3 360 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 ORC3Q9UBD5 711 aaPredicted RBP9.94□□□□□ -0.82
PATJ-216ENST00000635214 GOLGA8AA7E2F4 631 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 ZNF213O14771 459 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 IARSP41252 1262 aaKnown RBP9.94□□□□□ -0.82
PATJ-216ENST00000635214 EVCP57679 992 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 ATP8B2P98198 1209 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 ATP2B2Q01814 1243 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 ZBTB16Q05516 673 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 C8orf34Q49A92 452 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 CCDC110Q8TBZ0 833 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 CNPY2Q9Y2B0 182 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 MYO1BO43795 1136 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 IDH1O75874 414 aaKnown RBP9.94□□□□□ -0.82
PATJ-216ENST00000635214 MAP2K2P36507 400 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 PPP2R3AQ06190 1150 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 CALML4Q96GE6 196 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 INTS4Q96HW7 963 aaKnown RBP9.94□□□□□ -0.82
PATJ-216ENST00000635214 PCDH11XQ9BZA7 1347 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 PCDH11YQ9BZA8 1340 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 FMN2Q9NZ56 1722 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 PHACTR2O75167 634 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 VAMP4O75379 141 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 IGHDP01880 384 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 U2AF2P26368 475 aaKnown RBP eCLIP9.94□□□□□ -0.823e-7■■□□□ 11.5
PATJ-216ENST00000635214 ACTN2P35609 894 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 SH3BGRP55822 239 aaPredicted RBP9.94□□□□□ -0.82
PATJ-216ENST00000635214 CACNA2D3Q8IZS8 1091 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 NAPBQ9H115 298 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 BOLA2Q9H3K6 86 aa9.94□□□□□ -0.82
PATJ-216ENST00000635214 MYO5BQ9ULV0 1848 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 WDR17Q8IZU2 1322 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 UBA7P41226 1012 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 IQCA1Q86XH1 822 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 MIPOL1Q8TD10 442 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 TRIM47Q96LD4 638 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 NEK1Q96PY6 1258 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 TRIM7Q9C029 511 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 NDUFAB1O14561 156 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 ATP11AP98196 1134 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 TSNARE1Q96NA8 513 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 MYCBPQ99417 103 aaPredicted RBP9.93□□□□□ -0.82
PATJ-216ENST00000635214 LRP2BPQ9P2M1 347 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 CRB1P82279 1406 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 RAD50Q92878 1312 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 SHPRHQ149N8 1683 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 GIGYF1O75420 1035 aaPredicted RBP9.93□□□□□ -0.82
PATJ-216ENST00000635214 TNIP1Q15025 636 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 THUMPD2Q9BTF0 503 aaKnown RBP9.93□□□□□ -0.82
PATJ-216ENST00000635214 DCTPP1Q9H773 170 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 FAM184BQ9ULE4 1060 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 ATP2A1O14983 1001 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 IFIT1P09914 478 aaKnown RBP9.93□□□□□ -0.82
PATJ-216ENST00000635214 IL13P35225 146 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 STXBP4Q6ZWJ1 553 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 DRC1Q96MC2 740 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 ABCC6O95255 1503 aa9.93□□□□□ -0.82
PATJ-216ENST00000635214 IFT172Q9UG01 1749 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 ALDH3A1P30838 453 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 ZCRB1Q8TBF4 217 aaKnown RBP9.92□□□□□ -0.82
PATJ-216ENST00000635214 USP19O94966 1318 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 RIOK3O14730 519 aaKnown RBP9.92□□□□□ -0.82
PATJ-216ENST00000635214 MYL6BP14649 208 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 TNNC1P63316 161 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 ZBTB40Q9NUA8 1239 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 CCT2P78371 535 aaKnown RBP9.92□□□□□ -0.82
PATJ-216ENST00000635214 KSR2Q6VAB6 950 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 SPAG5Q96R06 1193 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 FERMT1Q9BQL6 677 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 ANAPC4Q9UJX5 808 aa9.92□□□□□ -0.82
PATJ-216ENST00000635214 ADGRB1O14514 1584 aa9.91□□□□□ -0.82
PATJ-216ENST00000635214 NLRP5P59047 1200 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms