RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 CD68P34810 354 aaPredicted RBP8.58□□□□□ -1.04
LINC00254-202ENST00000633813 FGD1P98174 961 aa8.58□□□□□ -1.04
LINC00254-202ENST00000633813 ADGRE1Q14246 886 aa8.58□□□□□ -1.04
LINC00254-202ENST00000633813 SLC7A3Q8WY07 619 aa8.58□□□□□ -1.04
LINC00254-202ENST00000633813 SAMD9Q5K651 1589 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 FHOD3Q2V2M9 1422 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 FMN1Q68DA7 1419 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 METTL12A8MUP2 240 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 C19orf57Q0VDD7 668 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 MBTPS1Q14703 1052 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 COL19A1Q14993 1142 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 SUZ12Q15022 739 aaKnown RBP8.57□□□□□ -1.04
LINC00254-202ENST00000633813 PRPF40BQ6NWY9 871 aaKnown RBP8.57□□□□□ -1.04
LINC00254-202ENST00000633813 VN1R5Q7Z5H4 357 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 GALNT11Q8NCW6 608 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 EPS8L3Q8TE67 593 aaKnown RBP8.57□□□□□ -1.04
LINC00254-202ENST00000633813 CARD10Q9BWT7 1032 aa8.57□□□□□ -1.04
LINC00254-202ENST00000633813 CLEC4MQ9H2X3 399 aaPredicted RBP8.57□□□□□ -1.04
LINC00254-202ENST00000633813 CARMIL2Q6F5E8 1435 aa8.56□□□□□ -1.04
LINC00254-202ENST00000633813 ANKRD33BA6NCL7 494 aa8.56□□□□□ -1.04
LINC00254-202ENST00000633813 GRIA4P48058 902 aa8.56□□□□□ -1.04
LINC00254-202ENST00000633813 TXNRD3Q86VQ6 643 aa8.56□□□□□ -1.04
LINC00254-202ENST00000633813 SOX17Q9H6I2 414 aaPredicted RBP8.56□□□□□ -1.04
LINC00254-202ENST00000633813 ZFYVE1Q9HBF4 777 aa8.56□□□□□ -1.04
LINC00254-202ENST00000633813 CHD1O14646 1710 aa8.56□□□□□ -1.04
LINC00254-202ENST00000633813 DISP1Q96F81 1524 aa8.55□□□□□ -1.04
LINC00254-202ENST00000633813 PROCP04070 461 aa8.55□□□□□ -1.04
LINC00254-202ENST00000633813 ESRRAP11474 423 aaPredicted RBP8.55□□□□□ -1.04
LINC00254-202ENST00000633813 ERCC3P19447 782 aa8.55□□□□□ -1.04
LINC00254-202ENST00000633813 ITPKAP23677 461 aa8.55□□□□□ -1.04
LINC00254-202ENST00000633813 PTPN12Q05209 780 aaKnown RBP8.55□□□□□ -1.04
LINC00254-202ENST00000633813 GRM2Q14416 872 aa8.55□□□□□ -1.04
LINC00254-202ENST00000633813 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.55□□□□□ -1.04
LINC00254-202ENST00000633813 DDX54Q8TDD1 881 aaKnown RBP8.55□□□□□ -1.04
LINC00254-202ENST00000633813 KLHDC7BQ96G42 594 aa8.55□□□□□ -1.04
LINC00254-202ENST00000633813 SOX1O00570 391 aaPredicted RBP8.54□□□□□ -1.04
LINC00254-202ENST00000633813 P4HBP07237 508 aaKnown RBP8.54□□□□□ -1.04
LINC00254-202ENST00000633813 PCDH1Q08174 1060 aa8.54□□□□□ -1.04
LINC00254-202ENST00000633813 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
LINC00254-202ENST00000633813 FOXD4L6Q3SYB3 417 aaPredicted RBP8.54□□□□□ -1.04
LINC00254-202ENST00000633813 FOXD4L3Q6VB84 417 aaPredicted RBP8.54□□□□□ -1.04
LINC00254-202ENST00000633813 TMEM130Q8N3G9 435 aa8.54□□□□□ -1.04
LINC00254-202ENST00000633813 SRCIN1Q9C0H9 1055 aa8.54□□□□□ -1.04
LINC00254-202ENST00000633813 AKTIPQ9H8T0 292 aa8.54□□□□□ -1.04
LINC00254-202ENST00000633813 ABCB6Q9NP58 842 aa8.54□□□□□ -1.04
LINC00254-202ENST00000633813 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
LINC00254-202ENST00000633813 GIPC1O14908 333 aa8.53□□□□□ -1.04
LINC00254-202ENST00000633813 LDHBP07195 334 aaKnown RBP8.53□□□□□ -1.04
LINC00254-202ENST00000633813 XRCC5P13010 732 aaKnown RBP8.53□□□□□ -1.04
LINC00254-202ENST00000633813 DUOXA2Q1HG44 320 aa8.53□□□□□ -1.04
LINC00254-202ENST00000633813 EAPPQ56P03 285 aaPredicted RBP8.53□□□□□ -1.04
LINC00254-202ENST00000633813 WFDC12Q8WWY7 111 aa8.53□□□□□ -1.04
LINC00254-202ENST00000633813 BCO2Q9BYV7 579 aa8.53□□□□□ -1.04
LINC00254-202ENST00000633813 ZNF576Q9H609 170 aa8.53□□□□□ -1.04
LINC00254-202ENST00000633813 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
LINC00254-202ENST00000633813 CASKIN1Q8WXD9 1431 aa8.53□□□□□ -1.04
LINC00254-202ENST00000633813 PRG4Q92954 1404 aaPredicted RBP8.53□□□□□ -1.04
LINC00254-202ENST00000633813 KIAA0556O60303 1618 aa8.52□□□□□ -1.05
LINC00254-202ENST00000633813 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
LINC00254-202ENST00000633813 NLRP12P59046 1061 aa8.52□□□□□ -1.05
LINC00254-202ENST00000633813 PI16Q6UXB8 463 aa8.52□□□□□ -1.05
LINC00254-202ENST00000633813 DTHD1Q6ZMT9 781 aa8.52□□□□□ -1.05
LINC00254-202ENST00000633813 ACAD11Q709F0 780 aa8.52□□□□□ -1.05
LINC00254-202ENST00000633813 FRMD6Q96NE9 622 aa8.52□□□□□ -1.05
LINC00254-202ENST00000633813 CLASP1Q7Z460 1538 aa8.51□□□□□ -1.05
LINC00254-202ENST00000633813 TM4SF5O14894 197 aa8.51□□□□□ -1.05
LINC00254-202ENST00000633813 IREB2P48200 963 aaKnown RBP8.51□□□□□ -1.05
LINC00254-202ENST00000633813 FCGRTP55899 365 aa8.51□□□□□ -1.05
LINC00254-202ENST00000633813 GSTM4Q03013 218 aa8.51□□□□□ -1.05
LINC00254-202ENST00000633813 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
LINC00254-202ENST00000633813 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
LINC00254-202ENST00000633813 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.51□□□□□ -1.05
LINC00254-202ENST00000633813 GLIS3Q8NEA6 775 aa8.51□□□□□ -1.05
LINC00254-202ENST00000633813 KCNK4Q9NYG8 393 aa8.51□□□□□ -1.05
LINC00254-202ENST00000633813 FYCO1Q9BQS8 1478 aa8.51□□□□□ -1.05
LINC00254-202ENST00000633813 MAP3K1Q13233 1512 aa8.5□□□□□ -1.05
LINC00254-202ENST00000633813 DDX3YO15523 660 aaKnown RBP8.5□□□□□ -1.05
LINC00254-202ENST00000633813 PRPF40AO75400 957 aaKnown RBP8.5□□□□□ -1.05
LINC00254-202ENST00000633813 B3GALT4O96024 378 aa8.5□□□□□ -1.05
LINC00254-202ENST00000633813 NOS3P29474 1203 aa8.5□□□□□ -1.05
LINC00254-202ENST00000633813 TMCO4Q5TGY1 634 aa8.5□□□□□ -1.05
LINC00254-202ENST00000633813 NXPE4Q6UWF7 544 aa8.5□□□□□ -1.05
LINC00254-202ENST00000633813 FOXD4L4Q8WXT5 416 aaPredicted RBP8.5□□□□□ -1.05
LINC00254-202ENST00000633813 WWC3Q9ULE0 1092 aa8.5□□□□□ -1.05
LINC00254-202ENST00000633813 SHROOM2Q13796 1616 aa8.5□□□□□ -1.05
LINC00254-202ENST00000633813 PTPRGP23470 1445 aa8.49□□□□□ -1.05
LINC00254-202ENST00000633813 ADAM11O75078 769 aa8.49□□□□□ -1.05
LINC00254-202ENST00000633813 GSTT1P30711 240 aa8.49□□□□□ -1.05
LINC00254-202ENST00000633813 TRIM26Q12899 539 aaPredicted RBP8.49□□□□□ -1.05
LINC00254-202ENST00000633813 ZNF423Q2M1K9 1284 aa8.49□□□□□ -1.05
LINC00254-202ENST00000633813 NPAS4Q8IUM7 802 aa8.49□□□□□ -1.05
LINC00254-202ENST00000633813 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
LINC00254-202ENST00000633813 CEP41Q9BYV8 373 aa8.49□□□□□ -1.05
LINC00254-202ENST00000633813 WISP1O95388 367 aa8.48□□□□□ -1.05
LINC00254-202ENST00000633813 CYP11A1P05108 521 aa8.48□□□□□ -1.05
LINC00254-202ENST00000633813 GLB1P16278 677 aa8.48□□□□□ -1.05
LINC00254-202ENST00000633813 DOC2BQ14184 412 aa8.48□□□□□ -1.05
LINC00254-202ENST00000633813 HP1BP3Q5SSJ5 553 aaPredicted RBP8.48□□□□□ -1.05
LINC00254-202ENST00000633813 HGSNATQ68CP4 663 aa8.48□□□□□ -1.05
LINC00254-202ENST00000633813 UBASH3BQ8TF42 649 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms