RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 DDX39AO00148 427 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 CHST3Q7LGC8 479 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 FMNL3Q8IVF7 1028 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 ZNF830Q96NB3 372 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 PAGR1Q9BTK6 254 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 CLSTN2Q9H4D0 955 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 TFIP11Q9UBB9 837 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 TACC3Q9Y6A5 838 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 KRT19P08727 400 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 IL15P40933 162 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 SLC39A6Q13433 755 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 SRGAP1Q7Z6B7 1085 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 USP48Q86UV5 1035 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 RBM28Q9NW13 759 aaKnown RBP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 TACC1O75410 805 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 RAPGEF1Q13905 1077 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 COPS6Q7L5N1 327 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 ITIH3Q06033 890 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 ERCC6LQ2NKX8 1250 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 CABLES1Q8TDN4 633 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 POLR3GO15318 223 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 PABPC4Q13310 644 aaKnown RBP eCLIP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 CSRNP2Q9H175 543 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 BTG4Q9NY30 223 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 FAM184BQ9ULE4 1060 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 TTLL3Q9Y4R7 772 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 ZNF526Q8TF50 670 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 DHX58Q96C10 678 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 ZSCAN16Q9H4T2 348 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 PCDH11XQ9BZA7 1347 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 PCDH11YQ9BZA8 1340 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 ESYT2A0FGR8 921 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 PTGS1P23219 599 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 MARCKSP29966 332 aaPredicted RBP7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 MTUS1Q9ULD2 1270 aa7.22□□□□□ -1.25
SRGAP1-207ENST00000631006 DENND4BO75064 1496 aaPredicted RBP7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 MCMDC2Q4G0Z9 681 aa7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 CCDC25Q86WR0 208 aa7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 KIF14Q15058 1648 aa7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 LAMC3Q9Y6N6 1575 aa7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 KIF11P52732 1056 aa7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 SPAG1Q07617 926 aa7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 CCDC129Q6ZRS4 1044 aa7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 CCDC110Q8TBZ0 833 aa7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 USP25Q9UHP3 1055 aa7.21□□□□□ -1.25
SRGAP1-207ENST00000631006 CSPG5O95196 566 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 ERCC5P28715 1186 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 SNW1Q13573 536 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 DTHD1Q6ZMT9 781 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 WDR46O15213 610 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 CALUO43852 315 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 P4HA1P13674 534 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 MUM1L1Q5H9M0 696 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 ZBTB33Q86T24 672 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 HELBQ8NG08 1087 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 PAG1Q9NWQ8 432 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 ANKFY1Q9P2R3 1169 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 NCKAP5LQ9HCH0 1330 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 SMIM23A6NLE4 172 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 ANXA1P04083 346 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 CLUL1Q15846 466 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 METTL13Q8N6R0 699 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 USP21Q9UK80 565 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 LRFN2Q9ULH4 789 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 ARHGEF35A5YM69 484 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 UBASH3AP57075 661 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 MAP7Q14244 749 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 AKAP4Q5JQC9 854 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 MSL1Q68DK7 614 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 LMBR1LQ6UX01 489 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 LEO1Q8WVC0 666 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 STIM2Q9P246 746 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 STK24Q9Y6E0 443 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 TRIM75PA6NK02 468 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 PPIP5K2O43314 1243 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 ATXN8OSP0DMR3 200 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 ARID4AP29374 1257 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 ALDH1B1P30837 517 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 HSPA4P34932 840 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 C4orf50Q6ZRC1 276 aa7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 SEC62Q99442 399 aaKnown RBP7.21□□□□□ -1.26
SRGAP1-207ENST00000631006 DLGAP5Q15398 846 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 CPXCR1Q8N123 301 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 ANKS4BQ8N8V4 417 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 KCNG4Q8TDN1 519 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 KCNK9Q9NPC2 374 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 MTRF1LQ9UGC7 380 aaKnown RBP7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 SV2BQ7L1I2 683 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 PLIN2Q99541 437 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 DNMBPQ6XZF7 1577 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 ZEB2O60315 1214 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 SSH1Q8WYL5 1049 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 KIF9Q9HAQ2 790 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 GNG11P61952 73 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 ELMSAN1Q6PJG2 1045 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 MAEAQ7L5Y9 396 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 LRRC2Q9BYS8 371 aa7.2□□□□□ -1.26
SRGAP1-207ENST00000631006 ABT1Q9ULW3 272 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms