RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-269ENST00000630224 MCOLN1Q9GZU1 580 aa7.85□□□□□ -1.15
TCF4-269ENST00000630224 MIS18AQ9NYP9 233 aa7.85□□□□□ -1.15
TCF4-269ENST00000630224 LTBP1Q14766 1721 aa7.84□□□□□ -1.15
TCF4-269ENST00000630224 RGS19P49795 217 aa7.84□□□□□ -1.15
TCF4-269ENST00000630224 RARSP54136 660 aaKnown RBP7.84□□□□□ -1.15
TCF4-269ENST00000630224 FKBP4Q02790 459 aaKnown RBP eCLIP7.84□□□□□ -1.15
TCF4-269ENST00000630224 TWISTNBQ3B726 338 aaPredicted RBP7.84□□□□□ -1.15
TCF4-269ENST00000630224 RTL5Q5HYW3 569 aaPredicted RBP7.84□□□□□ -1.15
TCF4-269ENST00000630224 SOGA3Q5TF21 947 aa7.84□□□□□ -1.15
TCF4-269ENST00000630224 SNIP1Q8TAD8 396 aaKnown RBP7.84□□□□□ -1.15
TCF4-269ENST00000630224 ZNF496Q96IT1 587 aaPredicted RBP7.84□□□□□ -1.15
TCF4-269ENST00000630224 MRGPRX2Q96LB1 330 aa7.84□□□□□ -1.15
TCF4-269ENST00000630224 DDX21Q9NR30 783 aaKnown RBP eCLIP7.84□□□□□ -1.15
TCF4-269ENST00000630224 BCORQ6W2J9 1755 aa7.84□□□□□ -1.15
TCF4-269ENST00000630224 MRC1P22897 1456 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 THSD7BQ9C0I4 1608 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 ELL2O00472 640 aaPredicted RBP7.83□□□□□ -1.16
TCF4-269ENST00000630224 CAMTA2O94983 1202 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 RRP1P56182 461 aaKnown RBP7.83□□□□□ -1.16
TCF4-269ENST00000630224 DGKZQ13574 1117 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 AGERQ15109 404 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 ALDH1L2Q3SY69 923 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 NPM2Q86SE8 214 aaKnown RBP7.83□□□□□ -1.16
TCF4-269ENST00000630224 PNMA8AQ86V59 439 aaPredicted RBP7.83□□□□□ -1.16
TCF4-269ENST00000630224 NBPF5PQ86XG9 351 aaPredicted RBP7.83□□□□□ -1.16
TCF4-269ENST00000630224 SYNE4Q8N205 404 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 C8orf58Q8NAV2 365 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 PROCA1Q8NCQ7 364 aaPredicted RBP7.83□□□□□ -1.16
TCF4-269ENST00000630224 ARMC2Q8NEN0 867 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 C7orf43Q8WVR3 580 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 BAP1Q92560 729 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 SMC4Q9NTJ3 1288 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 MAP10Q9P2G4 905 aa7.83□□□□□ -1.16
TCF4-269ENST00000630224 TCERG1O14776 1098 aaKnown RBP7.82□□□□□ -1.16
TCF4-269ENST00000630224 IPO8O15397 1037 aaKnown RBP7.82□□□□□ -1.16
TCF4-269ENST00000630224 VAMP4O75379 141 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 HOXB7P09629 217 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 IARSP41252 1262 aaKnown RBP7.82□□□□□ -1.16
TCF4-269ENST00000630224 EPS15P42566 896 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 ECE1P42892 770 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 SOX10P56693 466 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 EIF4A1P60842 406 aaKnown RBP7.82□□□□□ -1.16
TCF4-269ENST00000630224 CST9Q5W186 159 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 SLC51AQ86UW1 340 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 DZIP3Q86Y13 1208 aaKnown RBP7.82□□□□□ -1.16
TCF4-269ENST00000630224 STK31Q9BXU1 1019 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 COL4A5P29400 1685 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 HEG1Q9ULI3 1381 aa7.82□□□□□ -1.16
TCF4-269ENST00000630224 SIPA1L3O60292 1781 aaPredicted RBP7.82□□□□□ -1.16
TCF4-269ENST00000630224 KIF16BQ96L93 1317 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 KCNQ3O43525 872 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 AP1G2O75843 785 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 NPR1P16066 1061 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 LMOD1P29536 600 aaPredicted RBP7.81□□□□□ -1.16
TCF4-269ENST00000630224 IL6STP40189 918 aaPredicted RBP7.81□□□□□ -1.16
TCF4-269ENST00000630224 EIF6P56537 245 aaKnown RBP7.81□□□□□ -1.16
TCF4-269ENST00000630224 SKOR1P84550 965 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 CCDC30Q5VVM6 783 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 ERICH6BQ5W0A0 696 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 ZNF790Q6PG37 636 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 GPC2Q8N158 579 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 TSPYL6Q8N831 410 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 ZNF511Q8NB15 262 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 JDP2Q8WYK2 163 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 SSH1Q8WYL5 1049 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 FRAT1Q92837 279 aaPredicted RBP7.81□□□□□ -1.16
TCF4-269ENST00000630224 FMNL2Q96PY5 1086 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 ZNF408Q9H9D4 720 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 GOPCQ9HD26 462 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 GTF3C3Q9Y5Q9 886 aa7.81□□□□□ -1.16
TCF4-269ENST00000630224 DLG5Q8TDM6 1919 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 PRAMEF22A3QJZ6 481 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 FZD9O00144 591 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 BCAR3O75815 825 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 ALDH1A1P00352 501 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 F12P00748 615 aaPredicted RBP7.8□□□□□ -1.16
TCF4-269ENST00000630224 SH3BP2P78314 561 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 KRT24Q2M2I5 525 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 HDGFL1Q5TGJ6 251 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 ZKSCAN2Q63HK3 967 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 CIAPIN1Q6FI81 312 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 RTKN2Q8IZC4 609 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.8□□□□□ -1.16
TCF4-269ENST00000630224 BCL2L13Q9BXK5 485 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 TOR4AQ9NXH8 423 aa7.8□□□□□ -1.16
TCF4-269ENST00000630224 CELF2O95319 508 aaKnown RBP7.79□□□□□ -1.16
TCF4-269ENST00000630224 SNRPA1P09661 255 aaKnown RBP7.79□□□□□ -1.16
TCF4-269ENST00000630224 GTF2E1P29083 439 aaPredicted RBP7.79□□□□□ -1.16
TCF4-269ENST00000630224 SCNN1DP51172 638 aa7.79□□□□□ -1.16
TCF4-269ENST00000630224 PDE3AQ14432 1141 aa7.79□□□□□ -1.16
TCF4-269ENST00000630224 PNMA1Q8ND90 353 aa7.79□□□□□ -1.16
TCF4-269ENST00000630224 ZIC5Q96T25 663 aa7.79□□□□□ -1.16
TCF4-269ENST00000630224 TEX13AQ9BXU3 409 aaPredicted RBP7.79□□□□□ -1.16
TCF4-269ENST00000630224 GLIS2Q9BZE0 524 aaPredicted RBP7.79□□□□□ -1.16
TCF4-269ENST00000630224 NIP7Q9Y221 180 aaKnown RBP eCLIP7.79□□□□□ -1.16
TCF4-269ENST00000630224 USP16Q9Y5T5 823 aa7.79□□□□□ -1.16
TCF4-269ENST00000630224 TLL2Q9Y6L7 1015 aa7.79□□□□□ -1.16
TCF4-269ENST00000630224 WASF2Q9Y6W5 498 aa7.79□□□□□ -1.16
TCF4-269ENST00000630224 PLIN1O60240 522 aa7.78□□□□□ -1.16
TCF4-269ENST00000630224 EIF2S2P20042 333 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms