RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 USP17L7P0C7H9 530 aa4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 ITGB7P26010 798 aa4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 TAGLNQ01995 201 aaKnown RBP4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 PTPN12Q05209 780 aaKnown RBP4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 EAPPQ56P03 285 aaPredicted RBP4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 TPTE2Q6XPS3 522 aa4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 FAM161BQ96MY7 647 aa4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 ZC3H12CQ9C0D7 883 aaKnown RBP4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 RNF208Q9H0X6 261 aa4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 SEMA6BQ9H3T3 888 aa4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 C12orf49Q9H741 205 aa4.38□□□□□ -1.71
SCARNA4-201ENST00000629045 ZBTB7CA1YPR0 619 aa4.37□□□□□ -1.71
SCARNA4-201ENST00000629045 POU4F3Q15319 338 aa4.37□□□□□ -1.71
SCARNA4-201ENST00000629045 FDX2Q6P4F2 183 aa4.37□□□□□ -1.71
SCARNA4-201ENST00000629045 FBXO33Q7Z6M2 555 aa4.37□□□□□ -1.71
SCARNA4-201ENST00000629045 ARMC10Q8N2F6 343 aa4.37□□□□□ -1.71
SCARNA4-201ENST00000629045 STK35Q8TDR2 534 aa4.37□□□□□ -1.71
SCARNA4-201ENST00000629045 UTP4Q969X6 686 aaKnown RBP4.37□□□□□ -1.71
SCARNA4-201ENST00000629045 SPG7Q9UQ90 795 aa4.37□□□□□ -1.71
SCARNA4-201ENST00000629045 CELA3AP09093 270 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 DRD2P14416 443 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 GNA15P30679 374 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 GSTT1P30711 240 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 PDE3AQ14432 1141 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 RPS26P11Q5JNZ5 115 aaPredicted RBP4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 TMCO4Q5TGY1 634 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 ANKRD34AQ69YU3 496 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 FAM46AQ96IP4 442 aaKnown RBP4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 CORO1BQ9BR76 489 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 TMPRSS13Q9BYE2 586 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 CEP41Q9BYV8 373 aa4.36□□□□□ -1.71
SCARNA4-201ENST00000629045 ENC1O14682 589 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 SART1O43290 800 aaKnown RBP4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 GAS2O43903 313 aaKnown RBP4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 PAGE1O75459 146 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 CYP11A1P05108 521 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 XRCC5P13010 732 aaKnown RBP4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 EIF4BP23588 611 aaKnown RBP4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 COL19A1Q14993 1142 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 AKAP4Q5JQC9 854 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 NUTM2GQ5VZR2 741 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 PRR23CQ6ZRP0 262 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 SULF2Q8IWU5 870 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 C12orf50Q8NA57 414 aaPredicted RBP4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 CCDC86Q9H6F5 360 aaKnown RBP4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 TMEM39AQ9NV64 488 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 PPP4R2Q9NY27 417 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 FAM8A1Q9UBU6 413 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 PARP2Q9UGN5 583 aa4.35□□□□□ -1.71
SCARNA4-201ENST00000629045 TIAF1O95411 115 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 H2AFB1P0C5Y9 115 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 H2AFB2P0C5Z0 115 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 ADH5P11766 374 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 PPP2R3AQ06190 1150 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 TRIM26Q12899 539 aaPredicted RBP4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 AP3B2Q13367 1082 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 SGO2Q562F6 1265 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 PRSS36Q5K4E3 855 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 MEI1Q5TIA1 1274 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 RASIP1Q5U651 963 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 MPRIPQ6WCQ1 1025 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 PDZD3Q86UT5 571 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 SMG8Q8ND04 991 aaKnown RBP4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 DDX54Q8TDD1 881 aaKnown RBP4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 WDR89Q96FK6 387 aaPredicted RBP4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 MYRFLQ96LU7 910 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 NECAB3Q96P71 396 aaPredicted RBP4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 WDR18Q9BV38 432 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 SRCIN1Q9C0H9 1055 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 SUGCTQ9HAC7 445 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 CYP4F12Q9HCS2 524 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 TTF2Q9UNY4 1162 aaKnown RBP4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 AP4E1Q9UPM8 1137 aa4.34□□□□□ -1.71
SCARNA4-201ENST00000629045 HMX2A2RU54 273 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 MEGF11A6BM72 1044 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 GIPC1O14908 333 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 DHX15O43143 795 aaKnown RBP4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 AOC2O75106 756 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 GSTP1P09211 210 aaKnown RBP4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 BMP3P12645 472 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 LIG1P18858 919 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 MFAP1P55081 439 aaKnown RBP4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 PSMD2Q13200 908 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 UVSSAQ2YD98 709 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 EXOSC6Q5RKV6 272 aaKnown RBP4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 MAP1SQ66K74 1059 aaPredicted RBP4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 FAM20CQ8IXL6 584 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 C2CD4AQ8NCU7 369 aaPredicted RBP4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 GRIN3AQ8TCU5 1115 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 GIPC2Q8TF65 315 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 KCNB2Q92953 911 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 KCNF1Q9H3M0 494 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 CBX8Q9HC52 389 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 PPM1HQ9ULR3 514 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 ACTL7BQ9Y614 415 aa4.33□□□□□ -1.72
SCARNA4-201ENST00000629045 ZNF862O60290 1169 aa4.32□□□□□ -1.72
SCARNA4-201ENST00000629045 FSTP19883 344 aa4.32□□□□□ -1.72
SCARNA4-201ENST00000629045 RAB6AP20340 208 aa4.32□□□□□ -1.72
SCARNA4-201ENST00000629045 NME2P22392 152 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms