RNA–Protein interactions for RNA: ENST00000627784.2

TCF4-261, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-261ENST00000627784 SLC9C1Q4G0N8 1177 aa21.47■■□□□ 1.03
TCF4-261ENST00000627784 BEND3Q5T5X7 828 aa21.47■■□□□ 1.03
TCF4-261ENST00000627784 LDHAL6AQ6ZMR3 332 aa21.47■■□□□ 1.03
TCF4-261ENST00000627784 DZIP1LQ8IYY4 767 aaKnown RBP21.47■■□□□ 1.03
TCF4-261ENST00000627784 TDRD7Q8NHU6 1098 aaKnown RBP21.47■■□□□ 1.03
TCF4-261ENST00000627784 ARHGAP39Q9C0H5 1083 aa21.47■■□□□ 1.03
TCF4-261ENST00000627784 VAMP4O75379 141 aa21.46■■□□□ 1.03
TCF4-261ENST00000627784 CCDC27Q2M243 656 aa21.46■■□□□ 1.03
TCF4-261ENST00000627784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.46■■□□□ 1.03
TCF4-261ENST00000627784 ZFYVE28Q9HCC9 887 aa21.46■■□□□ 1.03
TCF4-261ENST00000627784 SERPINA10Q9UK55 444 aa21.46■■□□□ 1.03
TCF4-261ENST00000627784 MAP3K9P80192 1104 aa21.45■■□□□ 1.02
TCF4-261ENST00000627784 TNFAIP1Q13829 316 aa21.45■■□□□ 1.02
TCF4-261ENST00000627784 OTUD5Q96G74 571 aa21.45■■□□□ 1.02
TCF4-261ENST00000627784 FAM84BQ96KN1 310 aaPredicted RBP21.45■■□□□ 1.02
TCF4-261ENST00000627784 CNNM1Q9NRU3 951 aa21.45■■□□□ 1.02
TCF4-261ENST00000627784 CRKP46108 304 aa21.44■■□□□ 1.02
TCF4-261ENST00000627784 GTF2A2P52657 109 aa21.44■■□□□ 1.02
TCF4-261ENST00000627784 CCDC57Q2TAC2 916 aa21.44■■□□□ 1.02
TCF4-261ENST00000627784 SLC4A8Q2Y0W8 1093 aa21.44■■□□□ 1.02
TCF4-261ENST00000627784 SH3TC2Q8TF17 1288 aa21.44■■□□□ 1.02
TCF4-261ENST00000627784 PUS3Q9BZE2 481 aaKnown RBP21.44■■□□□ 1.02
TCF4-261ENST00000627784 FANCIQ9NVI1 1328 aa21.44■■□□□ 1.02
TCF4-261ENST00000627784 CEP290O15078 2479 aa21.44■■□□□ 1.02
TCF4-261ENST00000627784 ZSWIM8A7E2V4 1837 aa21.43■■□□□ 1.02
TCF4-261ENST00000627784 HIBADHP31937 336 aaKnown RBP21.43■■□□□ 1.02
TCF4-261ENST00000627784 CACNB3P54284 484 aa21.43■■□□□ 1.02
TCF4-261ENST00000627784 TAF7LQ5H9L4 462 aa21.43■■□□□ 1.02
TCF4-261ENST00000627784 NBPF11Q86T75 865 aa21.43■■□□□ 1.02
TCF4-261ENST00000627784 H0YGN5 161 aa21.42■■□□□ 1.02
TCF4-261ENST00000627784 ECM2O94769 699 aaPredicted RBP21.42■■□□□ 1.02
TCF4-261ENST00000627784 IQSEC3Q9UPP2 1182 aaPredicted RBP21.42■■□□□ 1.02
TCF4-261ENST00000627784 UBE4AQ14139 1066 aa21.41■■□□□ 1.02
TCF4-261ENST00000627784 CSADQ9Y600 493 aa21.41■■□□□ 1.02
TCF4-261ENST00000627784 SNCAIPQ9Y6H5 919 aa21.41■■□□□ 1.02
TCF4-261ENST00000627784 TRIOBPQ9H2D6 2365 aa21.4■■□□□ 1.02
TCF4-261ENST00000627784 IL16Q14005 1332 aa21.4■■□□□ 1.02
TCF4-261ENST00000627784 SPDYE5A6NIY4 337 aa21.4■■□□□ 1.02
TCF4-261ENST00000627784 BTBD19C9JJ37 291 aa21.4■■□□□ 1.02
TCF4-261ENST00000627784 GRM8O00222 908 aa21.4■■□□□ 1.02
TCF4-261ENST00000627784 EXOSC9Q06265 439 aaKnown RBP21.4■■□□□ 1.02
TCF4-261ENST00000627784 ZKSCAN4Q969J2 545 aaPredicted RBP21.4■■□□□ 1.02
TCF4-261ENST00000627784 TLR2O60603 784 aa21.39■■□□□ 1.01
TCF4-261ENST00000627784 CTGFP29279 349 aa21.39■■□□□ 1.01
TCF4-261ENST00000627784 LACTBP83111 547 aaPredicted RBP21.39■■□□□ 1.01
TCF4-261ENST00000627784 ARHGEF6Q15052 776 aa21.39■■□□□ 1.01
TCF4-261ENST00000627784 KAZALD1Q96I82 304 aa21.39■■□□□ 1.01
TCF4-261ENST00000627784 IRF6O14896 467 aa21.38■■□□□ 1.01
TCF4-261ENST00000627784 TNNI2P48788 182 aa21.38■■□□□ 1.01
TCF4-261ENST00000627784 SALL2Q9Y467 1007 aaPredicted RBP21.38■■□□□ 1.01
TCF4-261ENST00000627784 RIPOR2Q9Y4F9 1068 aa21.38■■□□□ 1.01
TCF4-261ENST00000627784 ARAP2Q8WZ64 1704 aa21.38■■□□□ 1.01
TCF4-261ENST00000627784 CHAF1AQ13111 956 aaPredicted RBP21.37■■□□□ 1.01
TCF4-261ENST00000627784 MTFR1Q15390 333 aa21.37■■□□□ 1.01
TCF4-261ENST00000627784 FBXO33Q7Z6M2 555 aa21.37■■□□□ 1.01
TCF4-261ENST00000627784 CETPP11597 493 aa21.36■■□□□ 1.01
TCF4-261ENST00000627784 ERO1BQ86YB8 467 aa21.36■■□□□ 1.01
TCF4-261ENST00000627784 SHISA4Q96DD7 197 aa21.36■■□□□ 1.01
TCF4-261ENST00000627784 SUCLG2Q96I99 432 aa21.36■■□□□ 1.01
TCF4-261ENST00000627784 WRNIP1Q96S55 665 aa21.36■■□□□ 1.01
TCF4-261ENST00000627784 C9orf78Q9NZ63 289 aaPredicted RBP21.36■■□□□ 1.01
TCF4-261ENST00000627784 SPINK5Q9NQ38 1064 aaPredicted RBP21.35■■□□□ 1.01
TCF4-261ENST00000627784 CACNA1FO60840 1977 aa21.34■■□□□ 1.01
TCF4-261ENST00000627784 LRRC24Q50LG9 513 aa21.34■■□□□ 1.01
TCF4-261ENST00000627784 APOBEC3HQ6NTF7 200 aaKnown RBP21.34■■□□□ 1.01
TCF4-261ENST00000627784 C17orf99Q6UX52 265 aa21.34■■□□□ 1.01
TCF4-261ENST00000627784 CHRDL2Q6WN34 429 aa21.34■■□□□ 1.01
TCF4-261ENST00000627784 MIGA2Q7L4E1 593 aa21.34■■□□□ 1.01
TCF4-261ENST00000627784 CPA4Q9UI42 421 aa21.34■■□□□ 1.01
TCF4-261ENST00000627784 NBPF7P0C2Y1 421 aaPredicted RBP21.33■■□□□ 1.01
TCF4-261ENST00000627784 SNAPC2Q13487 334 aa21.33■■□□□ 1.01
TCF4-261ENST00000627784 KIF22Q14807 665 aa21.33■■□□□ 1.01
TCF4-261ENST00000627784 SLC4A10Q6U841 1118 aa21.33■■□□□ 1.01
TCF4-261ENST00000627784 TEKT1Q969V4 418 aa21.33■■□□□ 1.01
TCF4-261ENST00000627784 HDLBPQ00341 1268 aaKnown RBP21.32■■□□□ 1
TCF4-261ENST00000627784 PPIL2Q13356 520 aa21.32■■□□□ 1
TCF4-261ENST00000627784 VPS37DQ86XT2 251 aa21.32■■□□□ 1
TCF4-261ENST00000627784 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.32■■□□□ 1
TCF4-261ENST00000627784 TRIM47Q96LD4 638 aa21.32■■□□□ 1
TCF4-261ENST00000627784 ZCCHC17Q9NP64 241 aaKnown RBP21.32■■□□□ 1
TCF4-261ENST00000627784 RBM27Q9P2N5 1060 aaKnown RBP21.32■■□□□ 1
TCF4-261ENST00000627784 INPP5BP32019 993 aa21.31■■□□□ 1
TCF4-261ENST00000627784 PSMC4P43686 418 aa21.31■■□□□ 1
TCF4-261ENST00000627784 BCAMP50895 628 aa21.31■■□□□ 1
TCF4-261ENST00000627784 FAM83AQ86UY5 434 aa21.31■■□□□ 1
TCF4-261ENST00000627784 ZDHHC15Q96MV8 337 aa21.31■■□□□ 1
TCF4-261ENST00000627784 LAMA3Q16787 3333 aa21.31■■□□□ 1
TCF4-261ENST00000627784 MROH5Q6ZUA9 1318 aa21.3■■□□□ 1
TCF4-261ENST00000627784 WDHD1O75717 1129 aaPredicted RBP21.3■■□□□ 1
TCF4-261ENST00000627784 ALDH1L1O75891 902 aa21.3■■□□□ 1
TCF4-261ENST00000627784 VGLL2Q8N8G2 317 aa21.3■■□□□ 1
TCF4-261ENST00000627784 DPF3Q92784 378 aa21.3■■□□□ 1
TCF4-261ENST00000627784 SRRDQ9UH36 339 aa21.3■■□□□ 1
TCF4-261ENST00000627784 COL6A3P12111 3177 aa21.29■■□□□ 1
TCF4-261ENST00000627784 FRAT2O75474 233 aaPredicted RBP21.29■■□□□ 1
TCF4-261ENST00000627784 GNRH1P01148 92 aa21.29■■□□□ 1
TCF4-261ENST00000627784 OSBPP22059 807 aa21.29■■□□□ 1
TCF4-261ENST00000627784 NCBP3Q53F19 620 aaKnown RBP21.29■■□□□ 1
TCF4-261ENST00000627784 WDR63Q8IWG1 891 aa21.29■■□□□ 1
TCF4-261ENST00000627784 KLHDC4Q8TBB5 520 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms