RNA–Protein interactions for RNA: ENST00000626793.2

UBE3A-213, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-213ENST00000626793 VGLL4Q14135 290 aa28.63■■■□□ 2.17
UBE3A-213ENST00000626793 TAF1CQ15572 869 aaPredicted RBP28.63■■■□□ 2.17
UBE3A-213ENST00000626793 FAM43AQ8N2R8 423 aa28.63■■■□□ 2.17
UBE3A-213ENST00000626793 ZFYVE28Q9HCC9 887 aa28.63■■■□□ 2.17
UBE3A-213ENST00000626793 FANCIQ9NVI1 1328 aa28.63■■■□□ 2.17
UBE3A-213ENST00000626793 HIBADHP31937 336 aaKnown RBP28.62■■■□□ 2.17
UBE3A-213ENST00000626793 FXR1P51114 621 aaKnown RBP eCLIP28.62■■■□□ 2.17
UBE3A-213ENST00000626793 GRIK5Q16478 980 aa28.62■■■□□ 2.17
UBE3A-213ENST00000626793 SLC9C1Q4G0N8 1177 aa28.62■■■□□ 2.17
UBE3A-213ENST00000626793 FAM84BQ96KN1 310 aaPredicted RBP28.62■■■□□ 2.17
UBE3A-213ENST00000626793 SALL2Q9Y467 1007 aaPredicted RBP28.62■■■□□ 2.17
UBE3A-213ENST00000626793 IL16Q14005 1332 aa28.62■■■□□ 2.17
UBE3A-213ENST00000626793 GTF2A2P52657 109 aa28.61■■■□□ 2.17
UBE3A-213ENST00000626793 OTUD5Q96G74 571 aa28.61■■■□□ 2.17
UBE3A-213ENST00000626793 PUS3Q9BZE2 481 aaKnown RBP28.61■■■□□ 2.17
UBE3A-213ENST00000626793 CRKP46108 304 aa28.6■■■□□ 2.17
UBE3A-213ENST00000626793 EXOSC9Q06265 439 aaKnown RBP28.6■■■□□ 2.17
UBE3A-213ENST00000626793 SLC4A8Q2Y0W8 1093 aa28.6■■■□□ 2.17
UBE3A-213ENST00000626793 NBPF11Q86T75 865 aa28.6■■■□□ 2.17
UBE3A-213ENST00000626793 COLQQ9Y215 455 aaPredicted RBP28.6■■■□□ 2.17
UBE3A-213ENST00000626793 GRM8O00222 908 aa28.59■■■□□ 2.17
UBE3A-213ENST00000626793 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.59■■■□□ 2.17
UBE3A-213ENST00000626793 ARHGAP39Q9C0H5 1083 aa28.59■■■□□ 2.17
UBE3A-213ENST00000626793 IQSEC3Q9UPP2 1182 aaPredicted RBP28.59■■■□□ 2.17
UBE3A-213ENST00000626793 CACNB3P54284 484 aa28.58■■■□□ 2.17
UBE3A-213ENST00000626793 UBE4AQ14139 1066 aa28.58■■■□□ 2.17
UBE3A-213ENST00000626793 ARHGEF6Q15052 776 aa28.58■■■□□ 2.17
UBE3A-213ENST00000626793 CSADQ9Y600 493 aa28.58■■■□□ 2.17
UBE3A-213ENST00000626793 KIAA0100Q14667 2235 aaKnown RBP28.57■■■□□ 2.16
UBE3A-213ENST00000626793 SH3TC2Q8TF17 1288 aa28.57■■■□□ 2.16
UBE3A-213ENST00000626793 C9orf78Q9NZ63 289 aaPredicted RBP28.57■■■□□ 2.16
UBE3A-213ENST00000626793 ECM2O94769 699 aaPredicted RBP28.56■■■□□ 2.16
UBE3A-213ENST00000626793 TNNI2P48788 182 aa28.56■■■□□ 2.16
UBE3A-213ENST00000626793 CHAF1AQ13111 956 aaPredicted RBP28.55■■■□□ 2.16
UBE3A-213ENST00000626793 ZKSCAN4Q969J2 545 aaPredicted RBP28.54■■■□□ 2.16
UBE3A-213ENST00000626793 SLC4A10Q6U841 1118 aa28.53■■■□□ 2.16
UBE3A-213ENST00000626793 SNCAIPQ9Y6H5 919 aa28.53■■■□□ 2.16
UBE3A-213ENST00000626793 ECM29Q5VYK3 1845 aa28.53■■■□□ 2.16
UBE3A-213ENST00000626793 SPDYE5A6NIY4 337 aa28.52■■■□□ 2.16
UBE3A-213ENST00000626793 TLR2O60603 784 aa28.52■■■□□ 2.16
UBE3A-213ENST00000626793 FBXO33Q7Z6M2 555 aa28.52■■■□□ 2.16
UBE3A-213ENST00000626793 VPS37DQ86XT2 251 aa28.52■■■□□ 2.16
UBE3A-213ENST00000626793 KAZALD1Q96I82 304 aa28.52■■■□□ 2.16
UBE3A-213ENST00000626793 SUCLG2Q96I99 432 aa28.52■■■□□ 2.16
UBE3A-213ENST00000626793 RIPOR2Q9Y4F9 1068 aa28.52■■■□□ 2.16
UBE3A-213ENST00000626793 BTBD19C9JJ37 291 aa28.51■■■□□ 2.15
UBE3A-213ENST00000626793 H0YGN5 161 aa28.51■■■□□ 2.15
UBE3A-213ENST00000626793 SPINK5Q9NQ38 1064 aaPredicted RBP28.51■■■□□ 2.15
UBE3A-213ENST00000626793 LAMB1P07942 1786 aa28.5■■■□□ 2.15
UBE3A-213ENST00000626793 IRF6O14896 467 aa28.5■■■□□ 2.15
UBE3A-213ENST00000626793 CETPP11597 493 aa28.5■■■□□ 2.15
UBE3A-213ENST00000626793 LACTBP83111 547 aaPredicted RBP28.5■■■□□ 2.15
UBE3A-213ENST00000626793 DIEXFQ68CQ4 756 aaKnown RBP28.5■■■□□ 2.15
UBE3A-213ENST00000626793 WRNIP1Q96S55 665 aa28.5■■■□□ 2.15
UBE3A-213ENST00000626793 FRAT2O75474 233 aaPredicted RBP28.49■■■□□ 2.15
UBE3A-213ENST00000626793 KIF22Q14807 665 aa28.49■■■□□ 2.15
UBE3A-213ENST00000626793 ERO1BQ86YB8 467 aa28.49■■■□□ 2.15
UBE3A-213ENST00000626793 WDR63Q8IWG1 891 aa28.49■■■□□ 2.15
UBE3A-213ENST00000626793 SZT2Q5T011 3432 aa28.49■■■□□ 2.15
UBE3A-213ENST00000626793 OTOFQ9HC10 1997 aa28.48■■■□□ 2.15
UBE3A-213ENST00000626793 A0A1B0GUL6 1792 aa28.48■■■□□ 2.15
UBE3A-213ENST00000626793 RBBP6Q7Z6E9 1792 aaKnown RBP28.48■■■□□ 2.15
UBE3A-213ENST00000626793 WDHD1O75717 1129 aaPredicted RBP28.48■■■□□ 2.15
UBE3A-213ENST00000626793 TEKT1Q969V4 418 aa28.48■■■□□ 2.15
UBE3A-213ENST00000626793 ALDH1L1O75891 902 aa28.47■■■□□ 2.15
UBE3A-213ENST00000626793 NBPF7P0C2Y1 421 aaPredicted RBP28.47■■■□□ 2.15
UBE3A-213ENST00000626793 SNAPC2Q13487 334 aa28.47■■■□□ 2.15
UBE3A-213ENST00000626793 LRRC24Q50LG9 513 aa28.47■■■□□ 2.15
UBE3A-213ENST00000626793 MIGA2Q7L4E1 593 aa28.47■■■□□ 2.15
UBE3A-213ENST00000626793 SRCIN1Q9C0H9 1055 aa28.47■■■□□ 2.15
UBE3A-213ENST00000626793 MROH5Q6ZUA9 1318 aa28.46■■■□□ 2.15
UBE3A-213ENST00000626793 BCAMP50895 628 aa28.46■■■□□ 2.15
UBE3A-213ENST00000626793 HDLBPQ00341 1268 aaKnown RBP28.46■■■□□ 2.15
UBE3A-213ENST00000626793 MTFR1Q15390 333 aa28.46■■■□□ 2.15
UBE3A-213ENST00000626793 NCBP3Q53F19 620 aaKnown RBP28.46■■■□□ 2.15
UBE3A-213ENST00000626793 APOBEC3HQ6NTF7 200 aaKnown RBP28.46■■■□□ 2.15
UBE3A-213ENST00000626793 CTGFP29279 349 aa28.45■■■□□ 2.14
UBE3A-213ENST00000626793 CPA4Q9UI42 421 aa28.45■■■□□ 2.14
UBE3A-213ENST00000626793 PPIL2Q13356 520 aa28.44■■■□□ 2.14
UBE3A-213ENST00000626793 CAVIN4Q5BKX8 364 aa28.44■■■□□ 2.14
UBE3A-213ENST00000626793 METTL24Q5JXM2 366 aa28.44■■■□□ 2.14
UBE3A-213ENST00000626793 TBC1D22AQ8WUA7 517 aa28.44■■■□□ 2.14
UBE3A-213ENST00000626793 ZDHHC15Q96MV8 337 aa28.44■■■□□ 2.14
UBE3A-213ENST00000626793 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.43■■■□□ 2.14
UBE3A-213ENST00000626793 BICC1Q9H694 974 aaKnown RBP28.43■■■□□ 2.14
UBE3A-213ENST00000626793 TMOD2Q9NZR1 351 aa28.43■■■□□ 2.14
UBE3A-213ENST00000626793 C17orf99Q6UX52 265 aa28.42■■■□□ 2.14
UBE3A-213ENST00000626793 FAM83AQ86UY5 434 aa28.42■■■□□ 2.14
UBE3A-213ENST00000626793 ZCCHC17Q9NP64 241 aaKnown RBP28.42■■■□□ 2.14
UBE3A-213ENST00000626793 GNRH1P01148 92 aa28.41■■■□□ 2.14
UBE3A-213ENST00000626793 INPP5BP32019 993 aa28.41■■■□□ 2.14
UBE3A-213ENST00000626793 PSMC4P43686 418 aa28.41■■■□□ 2.14
UBE3A-213ENST00000626793 CHRDL2Q6WN34 429 aa28.41■■■□□ 2.14
UBE3A-213ENST00000626793 KLHDC4Q8TBB5 520 aa28.41■■■□□ 2.14
UBE3A-213ENST00000626793 DPF3Q92784 378 aa28.41■■■□□ 2.14
UBE3A-213ENST00000626793 TRIM47Q96LD4 638 aa28.41■■■□□ 2.14
UBE3A-213ENST00000626793 SHISA4Q96DD7 197 aa28.4■■■□□ 2.14
UBE3A-213ENST00000626793 MRIQ9BWK5 157 aa28.4■■■□□ 2.14
UBE3A-213ENST00000626793 RANBP2P49792 3224 aaKnown RBP28.39■■■□□ 2.14
UBE3A-213ENST00000626793 PDE8BO95263 885 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms