RNA–Protein interactions for RNA: ENST00000626631.1

TCF4-256, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-256	ENST00000626631	MYH16	Q9H6N6	1097 aa		10.05	□□□□□ -0.8
TCF4-256	ENST00000626631	ANGEL1	Q9UNK9	670 aa	Known RBP	10.05	□□□□□ -0.8
TCF4-256	ENST00000626631	FZD1	Q9UP38	647 aa		10.05	□□□□□ -0.8
TCF4-256	ENST00000626631	PCDHAC2	Q9Y5I4	1007 aa		10.05	□□□□□ -0.8
TCF4-256	ENST00000626631	SPEF2	Q9C093	1822 aa		10.05	□□□□□ -0.8
TCF4-256	ENST00000626631	ANKRD18B	A2A2Z9	1011 aa		10.04	□□□□□ -0.8
TCF4-256	ENST00000626631	ALDH1A1	P00352	501 aa		10.04	□□□□□ -0.8
TCF4-256	ENST00000626631	FKBP1A	P62942	108 aa	Known RBP	10.04	□□□□□ -0.8
TCF4-256	ENST00000626631	FKBP5	Q13451	457 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-256	ENST00000626631	HELB	Q8NG08	1087 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-256	ENST00000626631	SLC10A4	Q96EP9	437 aa		10.04	□□□□□ -0.8
TCF4-256	ENST00000626631	PRMT6	Q96LA8	375 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-256	ENST00000626631	COL1A1	P02452	1464 aa	Predicted RBP	10.04	□□□□□ -0.8
TCF4-256	ENST00000626631	SSC5D	A1L4H1	1573 aa		10.03	□□□□□ -0.8
TCF4-256	ENST00000626631	MANSC4	A6NHS7	340 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF4-256	ENST00000626631	ZBTB48	P10074	688 aa	Predicted RBP	10.03	□□□□□ -0.8
TCF4-256	ENST00000626631	KCNJ4	P48050	445 aa		10.03	□□□□□ -0.8
TCF4-256	ENST00000626631	BEND3	Q5T5X7	828 aa		10.03	□□□□□ -0.8
TCF4-256	ENST00000626631	CLMN	Q96JQ2	1002 aa		10.03	□□□□□ -0.8
TCF4-256	ENST00000626631	PPP2R3B	Q9Y5P8	575 aa		10.03	□□□□□ -0.8
TCF4-256	ENST00000626631	AOX1	Q06278	1338 aa		10.03	□□□□□ -0.8
TCF4-256	ENST00000626631	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	PPP1R12B	O60237	982 aa	Predicted RBP	10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	USP2	O75604	605 aa	Predicted RBP	10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	IFIT5	Q13325	482 aa	Known RBP	10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	SUPT20HL1	Q3ZLR7	823 aa		10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	CFAP100	Q494V2	611 aa		10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	EPHA10	Q5JZY3	1008 aa		10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	WDR63	Q8IWG1	891 aa		10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	WNK4	Q96J92	1243 aa		10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	FANCI	Q9NVI1	1328 aa		10.02	□□□□□ -0.81
TCF4-256	ENST00000626631	CLRN2	A0PK11	232 aa		10.01	□□□□□ -0.81
TCF4-256	ENST00000626631	TESPA1	A2RU30	521 aa	Predicted RBP	10.01	□□□□□ -0.81
TCF4-256	ENST00000626631		F6X3S4	739 aa		10.01	□□□□□ -0.81
TCF4-256	ENST00000626631	GJA5	P36382	358 aa		10.01	□□□□□ -0.81
TCF4-256	ENST00000626631	LMBR1L	Q6UX01	489 aa		10.01	□□□□□ -0.81
TCF4-256	ENST00000626631	OTOP1	Q7RTM1	612 aa		10.01	□□□□□ -0.81
TCF4-256	ENST00000626631	ZNF804A	Q7Z570	1209 aa		10.01	□□□□□ -0.81
TCF4-256	ENST00000626631	PTPN18	Q99952	460 aa		10.01	□□□□□ -0.81
TCF4-256	ENST00000626631	FAM205A	Q6ZU69	1335 aa		10.01	□□□□□ -0.81
TCF4-256	ENST00000626631	CACNA1F	O60840	1977 aa		10.01	□□□□□ -0.81
TCF4-256	ENST00000626631	POTEB3	A0JP26	581 aa		10	□□□□□ -0.81
TCF4-256	ENST00000626631		F8W031	263 aa	Predicted RBP	10	□□□□□ -0.81
TCF4-256	ENST00000626631	MYO1B	O43795	1136 aa		10	□□□□□ -0.81
TCF4-256	ENST00000626631	EXOSC9	Q06265	439 aa	Known RBP	10	□□□□□ -0.81
TCF4-256	ENST00000626631	RASA3	Q14644	834 aa		10	□□□□□ -0.81
TCF4-256	ENST00000626631	POTEB	Q6S5H4	581 aa		10	□□□□□ -0.81
TCF4-256	ENST00000626631	LDHAL6A	Q6ZMR3	332 aa		10	□□□□□ -0.81
TCF4-256	ENST00000626631	TDRD7	Q8NHU6	1098 aa	Known RBP	10	□□□□□ -0.81
TCF4-256	ENST00000626631	ZNF594	Q96JF6	807 aa	Predicted RBP	10	□□□□□ -0.81
TCF4-256	ENST00000626631	GRM8	O00222	908 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	IREB2	P48200	963 aa	Known RBP	9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	CAP1	Q01518	475 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	UBE4A	Q14139	1066 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	CCDC57	Q2TAC2	916 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	INTS3	Q68E01	1043 aa	Known RBP	9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	ANKRD13A	Q8IZ07	590 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	MS4A4A	Q96JQ5	239 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	FAM84B	Q96KN1	310 aa	Predicted RBP	9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	TEPSIN	Q96N21	525 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	VEZT	Q9HBM0	779 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	ZNF70	Q9UC06	446 aa	Predicted RBP	9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	SERPINA10	Q9UK55	444 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	JAG2	Q9Y219	1238 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	TRIM17	Q9Y577	477 aa		9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	KIAA0100	Q14667	2235 aa	Known RBP	9.99	□□□□□ -0.81
TCF4-256	ENST00000626631	LAMB1	P07942	1786 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	PLIN1	O60240	522 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	CRHR2	Q13324	411 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	OTUD7B	Q6GQQ9	843 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	PLCD3	Q8N3E9	789 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	KAZALD1	Q96I82	304 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	CNNM1	Q9NRU3	951 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	PTPN22	Q9Y2R2	807 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	CHMP3	Q9Y3E7	222 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	RIPOR2	Q9Y4F9	1068 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631		A0A1B0GUL6	1792 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	ECM29	Q5VYK3	1845 aa		9.98	□□□□□ -0.81
TCF4-256	ENST00000626631	RANBP2	P49792	3224 aa	Known RBP	9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	ALDH1L1	O75891	902 aa		9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	HIBADH	P31937	336 aa	Known RBP	9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	GYG1	P46976	350 aa		9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	RBM5	P52756	815 aa	Known RBP eCLIP	9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	MFSD14B	Q5SR56	506 aa		9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	FBXO33	Q7Z6M2	555 aa		9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	DZIP1L	Q8IYY4	767 aa	Known RBP	9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	CD99L2	Q8TCZ2	262 aa		9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	ARMC5	Q96C12	935 aa		9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	ERO1A	Q96HE7	468 aa		9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	PUS3	Q9BZE2	481 aa	Known RBP	9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	TDRD3	Q9H7E2	651 aa	Known RBP	9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	TTF2	Q9UNY4	1162 aa	Known RBP	9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	SZT2	Q5T011	3432 aa		9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	CEP290	O15078	2479 aa		9.97	□□□□□ -0.81
TCF4-256	ENST00000626631	SP3	Q02447	781 aa		9.96	□□□□□ -0.82
TCF4-256	ENST00000626631	TNFAIP1	Q13829	316 aa		9.96	□□□□□ -0.82
TCF4-256	ENST00000626631	GRIK5	Q16478	980 aa		9.96	□□□□□ -0.82

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