RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 APOBEC3FQ8IUX4 373 aaKnown RBP24.57■■□□□ 1.52
PNKP-219ENST00000626274 ZGPATQ8N5A5 531 aaKnown RBP24.57■■□□□ 1.52
PNKP-219ENST00000626274 DNAJC5GQ8N7S2 189 aa24.57■■□□□ 1.52
PNKP-219ENST00000626274 TEKT1Q969V4 418 aa24.57■■□□□ 1.52
PNKP-219ENST00000626274 MRIQ9BWK5 157 aa24.57■■□□□ 1.52
PNKP-219ENST00000626274 ZNF408Q9H9D4 720 aa24.57■■□□□ 1.52
PNKP-219ENST00000626274 APBB1O00213 710 aa24.56■■□□□ 1.52
PNKP-219ENST00000626274 TTC39AQ5SRH9 613 aa24.56■■□□□ 1.52
PNKP-219ENST00000626274 CCDC8Q9H0W5 538 aaPredicted RBP24.56■■□□□ 1.52
PNKP-219ENST00000626274 HMG20BQ9P0W2 317 aa24.56■■□□□ 1.52
PNKP-219ENST00000626274 DBNLQ9UJU6 430 aaKnown RBP24.56■■□□□ 1.52
PNKP-219ENST00000626274 LDHBP07195 334 aaKnown RBP24.55■■□□□ 1.52
PNKP-219ENST00000626274 AACSQ86V21 672 aa24.55■■□□□ 1.52
PNKP-219ENST00000626274 SPATA5Q8NB90 893 aa24.55■■□□□ 1.52
PNKP-219ENST00000626274 CDCA5Q96FF9 252 aa24.55■■□□□ 1.52
PNKP-219ENST00000626274 IL1RAPL2Q9NP60 686 aa24.55■■□□□ 1.52
PNKP-219ENST00000626274 ABT1Q9ULW3 272 aaKnown RBP24.55■■□□□ 1.52
PNKP-219ENST00000626274 SCAF8Q9UPN6 1271 aaKnown RBP24.55■■□□□ 1.52
PNKP-219ENST00000626274 SUPT16HQ9Y5B9 1047 aaKnown RBP24.55■■□□□ 1.52
PNKP-219ENST00000626274 AKAP11Q9UKA4 1901 aa24.55■■□□□ 1.52
PNKP-219ENST00000626274 PRDX5P30044 214 aa24.54■■□□□ 1.52
PNKP-219ENST00000626274 CLASRPQ8N2M8 674 aaKnown RBP24.54■■□□□ 1.52
PNKP-219ENST00000626274 CLRN2A0PK11 232 aa24.53■■□□□ 1.52
PNKP-219ENST00000626274 MCAMP43121 646 aa24.53■■□□□ 1.52
PNKP-219ENST00000626274 SPTY2D1Q68D10 685 aaPredicted RBP24.53■■□□□ 1.52
PNKP-219ENST00000626274 HHIPL2Q6UWX4 724 aa24.53■■□□□ 1.52
PNKP-219ENST00000626274 KLRG1Q96E93 195 aa24.53■■□□□ 1.52
PNKP-219ENST00000626274 ZNF512BQ96KM6 892 aaPredicted RBP24.53■■□□□ 1.52
PNKP-219ENST00000626274 ZDHHC15Q96MV8 337 aa24.53■■□□□ 1.52
PNKP-219ENST00000626274 TLR7Q9NYK1 1049 aaKnown RBP24.53■■□□□ 1.52
PNKP-219ENST00000626274 ABCF2Q9UG63 623 aa24.53■■□□□ 1.52
PNKP-219ENST00000626274 PCDHB15Q9Y5E8 787 aa24.53■■□□□ 1.52
PNKP-219ENST00000626274 MYH2Q9UKX2 1941 aa24.53■■□□□ 1.52
PNKP-219ENST00000626274 TDRD3Q9H7E2 651 aaKnown RBP24.52■■□□□ 1.52
PNKP-219ENST00000626274 MKRN1Q9UHC7 482 aaKnown RBP24.52■■□□□ 1.52
PNKP-219ENST00000626274 AOX1Q06278 1338 aa24.52■■□□□ 1.52
PNKP-219ENST00000626274 SPDYE2Q495Y8 402 aa24.51■■□□□ 1.51
PNKP-219ENST00000626274 PI16Q6UXB8 463 aa24.51■■□□□ 1.51
PNKP-219ENST00000626274 VEZTQ9HBM0 779 aa24.51■■□□□ 1.51
PNKP-219ENST00000626274 ZNF70Q9UC06 446 aaPredicted RBP24.51■■□□□ 1.51
PNKP-219ENST00000626274 TLL2Q9Y6L7 1015 aa24.51■■□□□ 1.51
PNKP-219ENST00000626274 AAMPQ13685 434 aa24.5■■□□□ 1.51
PNKP-219ENST00000626274 ERICH6Q7L0X2 663 aa24.5■■□□□ 1.51
PNKP-219ENST00000626274 DCTPP1Q9H773 170 aa24.5■■□□□ 1.51
PNKP-219ENST00000626274 CNTNAP1P78357 1384 aa24.5■■□□□ 1.51
PNKP-219ENST00000626274 RASSF10A6NK89 507 aa24.49■■□□□ 1.51
PNKP-219ENST00000626274 DIXDC1Q155Q3 683 aa24.49■■□□□ 1.51
PNKP-219ENST00000626274 DEFB115Q30KQ5 88 aa24.49■■□□□ 1.51
PNKP-219ENST00000626274 SAPCD2Q86UD0 394 aa24.49■■□□□ 1.51
PNKP-219ENST00000626274 DZIP1Q86YF9 867 aaKnown RBP24.49■■□□□ 1.51
PNKP-219ENST00000626274 C2orf69Q8N8R5 385 aa24.49■■□□□ 1.51
PNKP-219ENST00000626274 LRRCC1Q9C099 1032 aa24.49■■□□□ 1.51
PNKP-219ENST00000626274 DEFB129Q9H1M3 183 aa24.49■■□□□ 1.51
PNKP-219ENST00000626274 GBA2Q9HCG7 927 aaPredicted RBP24.49■■□□□ 1.51
PNKP-219ENST00000626274 PPP2R3BQ9Y5P8 575 aa24.49■■□□□ 1.51
PNKP-219ENST00000626274 IFIT2P09913 472 aaKnown RBP24.48■■□□□ 1.51
PNKP-219ENST00000626274 PRAMEF18Q5VWM3 479 aa24.48■■□□□ 1.51
PNKP-219ENST00000626274 APOBEC3HQ6NTF7 200 aaKnown RBP24.48■■□□□ 1.51
PNKP-219ENST00000626274 SNRKQ9NRH2 765 aa24.48■■□□□ 1.51
PNKP-219ENST00000626274 NF2P35240 595 aa24.47■■□□□ 1.51
PNKP-219ENST00000626274 TNFAIP1Q13829 316 aa24.47■■□□□ 1.51
PNKP-219ENST00000626274 TBC1D9Q6ZT07 1266 aa24.47■■□□□ 1.51
PNKP-219ENST00000626274 SLF2Q8IX21 1173 aa24.47■■□□□ 1.51
PNKP-219ENST00000626274 BCL11AQ9H165 835 aa24.47■■□□□ 1.51
PNKP-219ENST00000626274 DAGLAQ9Y4D2 1042 aa24.47■■□□□ 1.51
PNKP-219ENST00000626274 TMOD2Q9NZR1 351 aa24.46■■□□□ 1.51
PNKP-219ENST00000626274 MYO5AQ9Y4I1 1855 aaKnown RBP24.46■■□□□ 1.51
PNKP-219ENST00000626274 PAPPA2Q9BXP8 1791 aa24.45■■□□□ 1.5
PNKP-219ENST00000626274 FKBP1BP68106 108 aa24.45■■□□□ 1.5
PNKP-219ENST00000626274 RASA3Q14644 834 aa24.45■■□□□ 1.5
PNKP-219ENST00000626274 HHIPL1Q96JK4 782 aa24.45■■□□□ 1.5
PNKP-219ENST00000626274 LRP2BPQ9P2M1 347 aa24.45■■□□□ 1.5
PNKP-219ENST00000626274 CEP350Q5VT06 3117 aa24.44■■□□□ 1.5
PNKP-219ENST00000626274 ZAP70P43403 619 aa24.44■■□□□ 1.5
PNKP-219ENST00000626274 TNNI2P48788 182 aa24.44■■□□□ 1.5
PNKP-219ENST00000626274 HUNKP57058 714 aa24.44■■□□□ 1.5
PNKP-219ENST00000626274 MECOMQ03112 1051 aa24.44■■□□□ 1.5
PNKP-219ENST00000626274 FAM163AQ96GL9 167 aaPredicted RBP24.44■■□□□ 1.5
PNKP-219ENST00000626274 RAI14Q9P0K7 980 aa24.44■■□□□ 1.5
PNKP-219ENST00000626274 GAKO14976 1311 aa24.43■■□□□ 1.5
PNKP-219ENST00000626274 TCP10L2B9ZVM9 353 aa24.43■■□□□ 1.5
PNKP-219ENST00000626274 CYP2E1P05181 493 aaPredicted RBP24.43■■□□□ 1.5
PNKP-219ENST00000626274 VEGFBP49765 207 aa24.43■■□□□ 1.5
PNKP-219ENST00000626274 GSTO1P78417 241 aa24.43■■□□□ 1.5
PNKP-219ENST00000626274 FKBP1CQ5VVH2 108 aa24.43■■□□□ 1.5
PNKP-219ENST00000626274 PAXIP1Q6ZW49 1069 aaPredicted RBP24.43■■□□□ 1.5
PNKP-219ENST00000626274 JMYQ8N9B5 988 aa24.43■■□□□ 1.5
PNKP-219ENST00000626274 EXOC6Q8TAG9 804 aa24.43■■□□□ 1.5
PNKP-219ENST00000626274 SMARCA5O60264 1052 aaPredicted RBP24.42■■□□□ 1.5
PNKP-219ENST00000626274 LDHCP07864 332 aa24.42■■□□□ 1.5
PNKP-219ENST00000626274 ECE1P42892 770 aa24.42■■□□□ 1.5
PNKP-219ENST00000626274 CACNB3P54284 484 aa24.42■■□□□ 1.5
PNKP-219ENST00000626274 SUPT20HL1Q3ZLR7 823 aa24.42■■□□□ 1.5
PNKP-219ENST00000626274 CDC42EP5Q6NZY7 148 aa24.42■■□□□ 1.5
PNKP-219ENST00000626274 NSUN4Q96CB9 384 aaKnown RBP24.42■■□□□ 1.5
PNKP-219ENST00000626274 IGSF3O75054 1194 aa24.41■■□□□ 1.5
PNKP-219ENST00000626274 TTLL12Q14166 644 aaPredicted RBP24.41■■□□□ 1.5
PNKP-219ENST00000626274 ZNF384Q8TF68 577 aa24.41■■□□□ 1.5
PNKP-219ENST00000626274 CAPNS2Q96L46 248 aa24.41■■□□□ 1.5
PNKP-219ENST00000626274 MAST2Q6P0Q8 1798 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms