RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 PPP4CP60510 307 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 OS9Q13438 667 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 NUDT18Q6ZVK8 323 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 ANKRD44Q8N8A2 993 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 HELBQ8NG08 1087 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 KAZALD1Q96I82 304 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 SIL1Q9H173 461 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 DBNDD1Q9H9R9 158 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 PODXL2Q9NZ53 605 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 POLLQ9UGP5 575 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 ZNRF3Q9ULT6 936 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 LEMD3Q9Y2U8 911 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 COG6Q9Y2V7 657 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 ZNF804BA4D1E1 1349 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 ZNF541Q9H0D2 1346 aa8.98□□□□□ -0.97
NPLOC4-221ENST00000625705 LTBP1Q14766 1721 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 ECE2O60344 883 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 TAF5LO75529 589 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 RAD17O75943 681 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 DDNO94850 711 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 MVPQ14764 893 aaKnown RBP8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 TNIP1Q15025 636 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 CIAPIN1Q6FI81 312 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 KLHDC4Q8TBB5 520 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 C1orf115Q9H7X2 142 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 RRAGCQ9HB90 399 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 NMRK2Q9NPI5 230 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 NPDC1Q9NQX5 325 aaPredicted RBP8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 DDX19BQ9UMR2 479 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 MROH5Q6ZUA9 1318 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 MED23Q9ULK4 1368 aa8.97□□□□□ -0.97
NPLOC4-221ENST00000625705 A0A1B0GUL6 1792 aa8.96□□□□□ -0.97
NPLOC4-221ENST00000625705 IQCA1LA6NCM1 817 aa8.96□□□□□ -0.98
NPLOC4-221ENST00000625705 VEGFAP15692 232 aaPredicted RBP8.96□□□□□ -0.98
NPLOC4-221ENST00000625705 ZNF804AQ7Z570 1209 aa8.96□□□□□ -0.98
NPLOC4-221ENST00000625705 VPS37DQ86XT2 251 aa8.96□□□□□ -0.98
NPLOC4-221ENST00000625705 GPC2Q8N158 579 aa8.96□□□□□ -0.98
NPLOC4-221ENST00000625705 PUS3Q9BZE2 481 aaKnown RBP8.96□□□□□ -0.98
NPLOC4-221ENST00000625705 COL4A5P29400 1685 aa8.96□□□□□ -0.98
NPLOC4-221ENST00000625705 FZD9O00144 591 aa8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 EYA2O00167 538 aa8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 FRAT2O75474 233 aaPredicted RBP8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 RGS20O76081 388 aa8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 RRP1P56182 461 aaKnown RBP8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 KCNC4Q03721 635 aa8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 PDE3AQ14432 1141 aa8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 LRRC24Q50LG9 513 aa8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 EAPPQ56P03 285 aaPredicted RBP8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 PADI6Q6TGC4 694 aa8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 CEP126Q9P2H0 1117 aa8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 RBM27Q9P2N5 1060 aaKnown RBP8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 HACL1Q9UJ83 578 aa8.95□□□□□ -0.98
NPLOC4-221ENST00000625705 WDR90Q96KV7 1748 aa8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 ZBTB7BO15156 539 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 HMMRO75330 724 aa8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 IFIT1P09914 478 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 SLC5A1P13866 664 aa8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 CXCL9Q07325 125 aa8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 G3BP1Q13283 466 aaKnown RBP eCLIP8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 PUM3Q15397 648 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 CAVIN4Q5BKX8 364 aa8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 COA1Q9GZY4 146 aa8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 PA2G4Q9UQ80 394 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 SRCAPQ6ZRS2 3230 aa8.94□□□□□ -0.98
NPLOC4-221ENST00000625705 PNMA6EA0A0J9YXQ4 647 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 USP17L3A6NCW0 530 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 USP17L4A6NCW7 530 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 SNAP23O00161 211 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 CIAO1O76071 339 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 PDE8BO95263 885 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 KLRK1P26718 216 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 IL15P40933 162 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 GMPSP49915 693 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 PTPN12Q05209 780 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 UBE4AQ14139 1066 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 ATP2B3Q16720 1220 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 C20orf194Q5TEA3 1177 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 USP17L1Q7RTZ2 530 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 PODNQ7Z5L7 613 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 TTC13Q8NBP0 860 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 BCL11AQ9H165 835 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 RIPOR2Q9Y4F9 1068 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 SCN4AP35499 1836 aa8.93□□□□□ -0.98
NPLOC4-221ENST00000625705 WTIPA6NIX2 430 aaPredicted RBP8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 YDJCA8MPS7 323 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 H7C1D1 291 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 PSMD14O00487 310 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 RNF40O75150 1001 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 SURF6O75683 361 aaKnown RBP8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 HIBADHP31937 336 aaKnown RBP8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 EPHX2P34913 555 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 GYG1P46976 350 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 RFX5P48382 616 aaPredicted RBP8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 MTX1Q13505 466 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 GORABQ5T7V8 394 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 COPRSQ9NQ92 184 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 AKAP2Q9Y2D5 859 aa8.92□□□□□ -0.98
NPLOC4-221ENST00000625705 TOMM70O94826 608 aa8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 RPS12P25398 132 aaKnown RBP8.91□□□□□ -0.98
NPLOC4-221ENST00000625705 GTF2IP78347 998 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms