RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 GRIN2AQ12879 1464 aa5.58□□□□□ -1.52
CDKL5-208ENST00000624953 BIVM-ERCC5R4GMW8 1640 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 METTL12A8MUP2 240 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 FSCN2O14926 492 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 B3GALT4O96024 378 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 RPS26P11Q5JNZ5 115 aaPredicted RBP5.57□□□□□ -1.52
CDKL5-208ENST00000624953 NKAPLQ5M9Q1 402 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 HGSNATQ68CP4 663 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.57□□□□□ -1.52
CDKL5-208ENST00000624953 HOMEZQ8IX15 550 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 DZIP1LQ8IYY4 767 aaKnown RBP5.57□□□□□ -1.52
CDKL5-208ENST00000624953 EPS8L3Q8TE67 593 aaKnown RBP5.57□□□□□ -1.52
CDKL5-208ENST00000624953 LACRTQ9GZZ8 138 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 LIN7BQ9HAP6 207 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 KCNK4Q9NYG8 393 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 NUP160Q12769 1436 aa5.57□□□□□ -1.52
CDKL5-208ENST00000624953 KDM6BO15054 1643 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 A0A096LPE4 126 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 PNMA6FA0A0J9YX94 578 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 A0A1W2PPZ6 126 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 F8W735 103 aaPredicted RBP5.56□□□□□ -1.52
CDKL5-208ENST00000624953 LINC01387J3KSC0 135 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 SOX1O00570 391 aaPredicted RBP5.56□□□□□ -1.52
CDKL5-208ENST00000624953 WISP1O95388 367 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 NRG1Q02297 640 aaPredicted RBP5.56□□□□□ -1.52
CDKL5-208ENST00000624953 ZNF423Q2M1K9 1284 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 PI16Q6UXB8 463 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 TXNRD3Q86VQ6 643 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 DCAF11Q8TEB1 546 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 SETDB2Q96T68 719 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 RUSC2Q8N2Y8 1516 aa5.56□□□□□ -1.52
CDKL5-208ENST00000624953 TMEM238LA0A1B0GVL6 79 aa5.55□□□□□ -1.52
CDKL5-208ENST00000624953 ANKRD33BA6NCL7 494 aa5.55□□□□□ -1.52
CDKL5-208ENST00000624953 NOS3P29474 1203 aa5.55□□□□□ -1.52
CDKL5-208ENST00000624953 SPRED3Q2MJR0 410 aa5.55□□□□□ -1.52
CDKL5-208ENST00000624953 KIAA1211Q6ZU35 1233 aa5.55□□□□□ -1.52
CDKL5-208ENST00000624953 KLHDC7BQ96G42 594 aa5.55□□□□□ -1.52
CDKL5-208ENST00000624953 MRPL18Q9H0U6 180 aaKnown RBP5.55□□□□□ -1.52
CDKL5-208ENST00000624953 CLEC4MQ9H2X3 399 aaPredicted RBP5.55□□□□□ -1.52
CDKL5-208ENST00000624953 SEC31BQ9NQW1 1179 aa5.55□□□□□ -1.52
CDKL5-208ENST00000624953 MAPKBP1O60336 1514 aa5.54□□□□□ -1.52
CDKL5-208ENST00000624953 ERCC3P19447 782 aa5.54□□□□□ -1.52
CDKL5-208ENST00000624953 CD68P34810 354 aaPredicted RBP5.54□□□□□ -1.52
CDKL5-208ENST00000624953 FAAP100Q0VG06 881 aa5.54□□□□□ -1.52
CDKL5-208ENST00000624953 TXNDC11Q6PKC3 985 aa5.54□□□□□ -1.52
CDKL5-208ENST00000624953 KRTAP1-3Q8IUG1 177 aa5.54□□□□□ -1.52
CDKL5-208ENST00000624953 TRIM56Q9BRZ2 755 aaKnown RBP5.54□□□□□ -1.52
CDKL5-208ENST00000624953 WWC3Q9ULE0 1092 aa5.54□□□□□ -1.52
CDKL5-208ENST00000624953 TRAK1Q9UPV9 953 aa5.54□□□□□ -1.52
CDKL5-208ENST00000624953 SCO2A0A1W2PP80 73 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 MEGF11A6BM72 1044 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 GIPC1O14908 333 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 DYRK3O43781 588 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 DLGAP3O95886 979 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 APBA3O96018 575 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 XRCC5P13010 732 aaKnown RBP5.53□□□□□ -1.52
CDKL5-208ENST00000624953 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.53□□□□□ -1.52
CDKL5-208ENST00000624953 ALG1LQ6GMV1 187 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 TMC1Q8TDI8 760 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 WFDC12Q8WWY7 111 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 MEGF10Q96KG7 1140 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 OSBPL7Q9BZF2 842 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 SRCIN1Q9C0H9 1055 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 CACNA2D2Q9NY47 1150 aa5.53□□□□□ -1.52
CDKL5-208ENST00000624953 TOP2BQ02880 1626 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 ABCC10Q5T3U5 1492 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 PRPF40AO75400 957 aaKnown RBP5.52□□□□□ -1.53
CDKL5-208ENST00000624953 PCDH1Q08174 1060 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 C19orf57Q0VDD7 668 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 IKBKEQ14164 716 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 FRMD6Q96NE9 622 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 CARD10Q9BWT7 1032 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 BCO2Q9BYV7 579 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 GZF1Q9H116 711 aaPredicted RBP5.52□□□□□ -1.53
CDKL5-208ENST00000624953 EHD4Q9H223 541 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 CUL7Q14999 1698 aa5.52□□□□□ -1.53
CDKL5-208ENST00000624953 SYNGAP1Q96PV0 1343 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 HECW2Q9P2P5 1572 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 DDX3YO15523 660 aaKnown RBP5.51□□□□□ -1.53
CDKL5-208ENST00000624953 EIF4EBP3O60516 100 aaPredicted RBP5.51□□□□□ -1.53
CDKL5-208ENST00000624953 H2AFB1P0C5Y9 115 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 H2AFB2P0C5Z0 115 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 CABP4P57796 275 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 PRSS36Q5K4E3 855 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 UBASH3BQ8TF42 649 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 FAM46AQ96IP4 442 aaKnown RBP5.51□□□□□ -1.53
CDKL5-208ENST00000624953 TMPRSS13Q9BYE2 586 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 AKTIPQ9H8T0 292 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 SUGCTQ9HAC7 445 aa5.51□□□□□ -1.53
CDKL5-208ENST00000624953 LOC100289279A0A1B0GTE1 492 aa5.5□□□□□ -1.53
CDKL5-208ENST00000624953 TIAF1O95411 115 aa5.5□□□□□ -1.53
CDKL5-208ENST00000624953 CTSBP07858 339 aa5.5□□□□□ -1.53
CDKL5-208ENST00000624953 GNA15P30679 374 aa5.5□□□□□ -1.53
CDKL5-208ENST00000624953 CCDC27Q2M243 656 aa5.5□□□□□ -1.53
CDKL5-208ENST00000624953 NXPE4Q6UWF7 544 aa5.5□□□□□ -1.53
CDKL5-208ENST00000624953 PDZD3Q86UT5 571 aa5.5□□□□□ -1.53
CDKL5-208ENST00000624953 ASAP3Q8TDY4 903 aa5.5□□□□□ -1.53
CDKL5-208ENST00000624953 UBL7Q96S82 380 aaPredicted RBP5.5□□□□□ -1.53
CDKL5-208ENST00000624953 C12orf49Q9H741 205 aa5.5□□□□□ -1.53
CDKL5-208ENST00000624953 PPM1HQ9ULR3 514 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms