RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 DDX54Q8TDD1 881 aaKnown RBP7□□□□□ -1.29
CDKL5-207ENST00000624700 ANKRD24Q8TF21 1146 aa7□□□□□ -1.29
CDKL5-207ENST00000624700 UBL7Q96S82 380 aaPredicted RBP7□□□□□ -1.29
CDKL5-207ENST00000624700 SETDB2Q96T68 719 aa7□□□□□ -1.29
CDKL5-207ENST00000624700 TCF12Q99081 682 aa7□□□□□ -1.29
CDKL5-207ENST00000624700 POP1Q99575 1024 aaKnown RBP7□□□□□ -1.29
CDKL5-207ENST00000624700 CEP41Q9BYV8 373 aa7□□□□□ -1.29
CDKL5-207ENST00000624700 LATS2Q9NRM7 1088 aa7□□□□□ -1.29
CDKL5-207ENST00000624700 VTI1BQ9UEU0 232 aa7□□□□□ -1.29
CDKL5-207ENST00000624700 PPM1HQ9ULR3 514 aa7□□□□□ -1.29
CDKL5-207ENST00000624700 A0A096LPE4 126 aa6.99□□□□□ -1.29
CDKL5-207ENST00000624700 A0A1W2PPZ6 126 aa6.99□□□□□ -1.29
CDKL5-207ENST00000624700 DHX15O43143 795 aaKnown RBP6.99□□□□□ -1.29
CDKL5-207ENST00000624700 IGLV1-40P01703 118 aa6.99□□□□□ -1.29
CDKL5-207ENST00000624700 ITPKAP23677 461 aa6.99□□□□□ -1.29
CDKL5-207ENST00000624700 CDC27P30260 824 aa6.99□□□□□ -1.29
CDKL5-207ENST00000624700 ATP11AP98196 1134 aa6.99□□□□□ -1.29
CDKL5-207ENST00000624700 MRPL58Q14197 206 aaKnown RBP6.99□□□□□ -1.29
CDKL5-207ENST00000624700 DTHD1Q6ZMT9 781 aa6.99□□□□□ -1.29
CDKL5-207ENST00000624700 OSBPL7Q9BZF2 842 aa6.99□□□□□ -1.29
CDKL5-207ENST00000624700 LACRTQ9GZZ8 138 aa6.99□□□□□ -1.29
CDKL5-207ENST00000624700 WISP1O95388 367 aa6.98□□□□□ -1.29
CDKL5-207ENST00000624700 FAM117BQ6P1L5 589 aa6.98□□□□□ -1.29
CDKL5-207ENST00000624700 PI16Q6UXB8 463 aa6.98□□□□□ -1.29
CDKL5-207ENST00000624700 ACAD11Q709F0 780 aa6.98□□□□□ -1.29
CDKL5-207ENST00000624700 ASAP3Q8TDY4 903 aa6.98□□□□□ -1.29
CDKL5-207ENST00000624700 CEP44Q9C0F1 390 aa6.98□□□□□ -1.29
CDKL5-207ENST00000624700 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.98□□□□□ -1.29
CDKL5-207ENST00000624700 COL17A1Q9UMD9 1497 aaPredicted RBP6.98□□□□□ -1.29
CDKL5-207ENST00000624700 COBLO75128 1261 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 ARL4DP49703 201 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 ST13P50502 369 aaKnown RBP6.97□□□□□ -1.29
CDKL5-207ENST00000624700 FCGRTP55899 365 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 UVSSAQ2YD98 709 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 TXNDC11Q6PKC3 985 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 KLHL23Q8NBE8 558 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 GLIS3Q8NEA6 775 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 WNT8BQ93098 351 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 CRELD1Q96HD1 420 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 GOLGA2P5Q9HBQ8 144 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 KCNK4Q9NYG8 393 aa6.97□□□□□ -1.29
CDKL5-207ENST00000624700 USP31Q70CQ4 1352 aa6.96□□□□□ -1.29
CDKL5-207ENST00000624700 KIAA1324LA8MWY0 1029 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-207ENST00000624700 TM4SF5O14894 197 aa6.96□□□□□ -1.3
CDKL5-207ENST00000624700 FSCN2O14926 492 aa6.96□□□□□ -1.3
CDKL5-207ENST00000624700 MED26O95402 600 aa6.96□□□□□ -1.3
CDKL5-207ENST00000624700 TAF1CQ15572 869 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-207ENST00000624700 ARMC10Q8N2F6 343 aa6.96□□□□□ -1.3
CDKL5-207ENST00000624700 UTP4Q969X6 686 aaKnown RBP6.96□□□□□ -1.3
CDKL5-207ENST00000624700 CLEC4MQ9H2X3 399 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-207ENST00000624700 ABCB6Q9NP58 842 aa6.96□□□□□ -1.3
CDKL5-207ENST00000624700 METTL5Q9NRN9 209 aaKnown RBP6.96□□□□□ -1.3
CDKL5-207ENST00000624700 UNCXA6NJT0 531 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 TRPA1O75762 1119 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 TGFB1P01137 390 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 USP17L7P0C7H9 530 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 RLBP1P12271 317 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 CDC25BP30305 580 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 GRIA4P48058 902 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 PPP2R3AQ06190 1150 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 DUOXA2Q1HG44 320 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 KIAA1211Q6ZU35 1233 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 FAM46AQ96IP4 442 aaKnown RBP6.95□□□□□ -1.3
CDKL5-207ENST00000624700 FAM161BQ96MY7 647 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 CARD10Q9BWT7 1032 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 SOX13Q9UN79 622 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 AKAP2Q9Y2D5 859 aa6.95□□□□□ -1.3
CDKL5-207ENST00000624700 SCAMP3O14828 347 aaKnown RBP6.94□□□□□ -1.3
CDKL5-207ENST00000624700 PAX4O43316 350 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 ACPPP15309 386 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 PIP4K2BP78356 416 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 NFIAQ12857 509 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 IKBKEQ14164 716 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 ZDHHC13Q8IUH4 622 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 TMEM87AQ8NBN3 555 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 C3orf58Q8NDZ4 430 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 BACH2Q9BYV9 841 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 SOX17Q9H6I2 414 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-207ENST00000624700 C7orf69Q9H7B7 122 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 OSGEPQ9NPF4 335 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 SH2B1Q9NRF2 756 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-207ENST00000624700 KIAA1522Q9P206 1035 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-207ENST00000624700 SAMM50Q9Y512 469 aa6.94□□□□□ -1.3
CDKL5-207ENST00000624700 H3BRJ5 948 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 EPHA1P21709 976 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 IRAK1P51617 712 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 SPRED3Q2MJR0 410 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 TSNAXIP1Q2TAA8 658 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 RNF43Q68DV7 783 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 INTS5Q6P9B9 1019 aaKnown RBP6.93□□□□□ -1.3
CDKL5-207ENST00000624700 ADAMTSL4Q6UY14 1074 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 SV2BQ7L1I2 683 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 TRIM42Q8IWZ5 723 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 MYRFLQ96LU7 910 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 HHIPQ96QV1 700 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 NOC4LQ9BVI4 516 aaKnown RBP6.93□□□□□ -1.3
CDKL5-207ENST00000624700 SEC31BQ9NQW1 1179 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 RNF19AQ9NV58 838 aa6.93□□□□□ -1.3
CDKL5-207ENST00000624700 GRIK1P39086 918 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms