RNA–Protein interactions for RNA: ENST00000622887.1

HUWE1-215, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, human

TSL 5

Gene HUWE1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HUWE1-215	ENST00000622887	GRIK5	Q16478	980 aa		27.91	■■■□□ 2.06
HUWE1-215	ENST00000622887	CHAF1A	Q13111	956 aa	Predicted RBP	27.9	■■■□□ 2.06
HUWE1-215	ENST00000622887	ANKRD13A	Q8IZ07	590 aa		27.9	■■■□□ 2.06
HUWE1-215	ENST00000622887	TBC1D22A	Q8WUA7	517 aa		27.9	■■■□□ 2.06
HUWE1-215	ENST00000622887	FRAT2	O75474	233 aa	Predicted RBP	27.89	■■■□□ 2.06
HUWE1-215	ENST00000622887	ALDH1L2	Q3SY69	923 aa		27.89	■■■□□ 2.06
HUWE1-215	ENST00000622887	IGF2BP3	O00425	579 aa	Known RBP eCLIP	27.88	■■■□□ 2.05
HUWE1-215	ENST00000622887	BCAM	P50895	628 aa		27.88	■■■□□ 2.05
HUWE1-215	ENST00000622887	HDLBP	Q00341	1268 aa	Known RBP	27.88	■■■□□ 2.05
HUWE1-215	ENST00000622887	CDCA7L	Q96GN5	454 aa		27.88	■■■□□ 2.05
HUWE1-215	ENST00000622887	TEPSIN	Q96N21	525 aa		27.88	■■■□□ 2.05
HUWE1-215	ENST00000622887	TCP10L2	B9ZVM9	353 aa		27.87	■■■□□ 2.05
HUWE1-215	ENST00000622887	GJA5	P36382	358 aa		27.87	■■■□□ 2.05
HUWE1-215	ENST00000622887	FBXO46	Q6PJ61	603 aa	Predicted RBP	27.87	■■■□□ 2.05
HUWE1-215	ENST00000622887	FGFR2	P21802	821 aa		27.86	■■■□□ 2.05
HUWE1-215	ENST00000622887	CDAN1	Q8IWY9	1227 aa		27.86	■■■□□ 2.05
HUWE1-215	ENST00000622887	ARAP2	Q8WZ64	1704 aa		27.85	■■■□□ 2.05
HUWE1-215	ENST00000622887	IFIT1	P09914	478 aa	Known RBP	27.85	■■■□□ 2.05
HUWE1-215	ENST00000622887	RFX5	P48382	616 aa	Predicted RBP	27.85	■■■□□ 2.05
HUWE1-215	ENST00000622887	TNNI2	P48788	182 aa		27.85	■■■□□ 2.05
HUWE1-215	ENST00000622887	PUM3	Q15397	648 aa	Known RBP	27.85	■■■□□ 2.05
HUWE1-215	ENST00000622887	TMEM39B	Q9GZU3	492 aa		27.85	■■■□□ 2.05
HUWE1-215	ENST00000622887	SMC4	Q9NTJ3	1288 aa		27.85	■■■□□ 2.05
HUWE1-215	ENST00000622887	KIF16B	Q96L93	1317 aa		27.85	■■■□□ 2.05
HUWE1-215	ENST00000622887	EYA2	O00167	538 aa		27.84	■■■□□ 2.05
HUWE1-215	ENST00000622887	TEKT1	Q969V4	418 aa		27.84	■■■□□ 2.05
HUWE1-215	ENST00000622887	ELP3	Q9H9T3	547 aa		27.84	■■■□□ 2.05
HUWE1-215	ENST00000622887	OTUD7B	Q6GQQ9	843 aa		27.83	■■■□□ 2.05
HUWE1-215	ENST00000622887	TRMT2A	Q8IZ69	625 aa	Known RBP	27.83	■■■□□ 2.05
HUWE1-215	ENST00000622887	MRI	Q9BWK5	157 aa		27.83	■■■□□ 2.05
HUWE1-215	ENST00000622887	TESPA1	A2RU30	521 aa	Predicted RBP	27.82	■■■□□ 2.04
HUWE1-215	ENST00000622887	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	27.82	■■■□□ 2.04
HUWE1-215	ENST00000622887	OPTN	Q96CV9	577 aa		27.82	■■■□□ 2.04
HUWE1-215	ENST00000622887	SUGT1	Q9Y2Z0	365 aa		27.82	■■■□□ 2.04
HUWE1-215	ENST00000622887	MAP3K9	P80192	1104 aa		27.81	■■■□□ 2.04
HUWE1-215	ENST00000622887	ZDHHC15	Q96MV8	337 aa		27.81	■■■□□ 2.04
HUWE1-215	ENST00000622887	PTPN18	Q99952	460 aa		27.81	■■■□□ 2.04
HUWE1-215	ENST00000622887	CACNB3	P54284	484 aa		27.8	■■■□□ 2.04
HUWE1-215	ENST00000622887	LPIN2	Q92539	896 aa		27.8	■■■□□ 2.04
HUWE1-215	ENST00000622887	MAST3	O60307	1309 aa		27.79	■■■□□ 2.04
HUWE1-215	ENST00000622887	SLC5A1	P13866	664 aa		27.79	■■■□□ 2.04
HUWE1-215	ENST00000622887	CRHR2	Q13324	411 aa		27.79	■■■□□ 2.04
HUWE1-215	ENST00000622887	APOBEC3H	Q6NTF7	200 aa	Known RBP	27.79	■■■□□ 2.04
HUWE1-215	ENST00000622887	ATG9A	Q7Z3C6	839 aa		27.79	■■■□□ 2.04
HUWE1-215	ENST00000622887	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	27.79	■■■□□ 2.04
HUWE1-215	ENST00000622887	TRIM17	Q9Y577	477 aa		27.79	■■■□□ 2.04
HUWE1-215	ENST00000622887	LAMB1	P07942	1786 aa		27.78	■■■□□ 2.04
HUWE1-215	ENST00000622887	CT47B1	P0C2W7	299 aa	Predicted RBP	27.78	■■■□□ 2.04
HUWE1-215	ENST00000622887	UBTFL1	P0CB47	393 aa	Predicted RBP	27.78	■■■□□ 2.04
HUWE1-215	ENST00000622887	VGLL4	Q14135	290 aa		27.78	■■■□□ 2.04
HUWE1-215	ENST00000622887	MS4A4A	Q96JQ5	239 aa		27.78	■■■□□ 2.04
HUWE1-215	ENST00000622887	TMOD2	Q9NZR1	351 aa		27.78	■■■□□ 2.04
HUWE1-215	ENST00000622887	HHIPL2	Q6UWX4	724 aa		27.77	■■■□□ 2.04
HUWE1-215	ENST00000622887	CNKSR2	Q8WXI2	1034 aa		27.77	■■■□□ 2.04
HUWE1-215	ENST00000622887	NOB1	Q9ULX3	412 aa	Known RBP	27.77	■■■□□ 2.04
HUWE1-215	ENST00000622887	CSAD	Q9Y600	493 aa		27.77	■■■□□ 2.04
HUWE1-215	ENST00000622887	FKBP1C	Q5VVH2	108 aa		27.76	■■■□□ 2.03
HUWE1-215	ENST00000622887	OTOP1	Q7RTM1	612 aa		27.76	■■■□□ 2.03
HUWE1-215	ENST00000622887	FAM83A	Q86UY5	434 aa		27.76	■■■□□ 2.03
HUWE1-215	ENST00000622887	WDR66	Q8TBY9	1149 aa		27.76	■■■□□ 2.03
HUWE1-215	ENST00000622887	ERO1A	Q96HE7	468 aa		27.76	■■■□□ 2.03
HUWE1-215	ENST00000622887	FBXO3	Q9UK99	471 aa		27.76	■■■□□ 2.03
HUWE1-215	ENST00000622887	OTOF	Q9HC10	1997 aa		27.75	■■■□□ 2.03
HUWE1-215	ENST00000622887	CIAO1	O76071	339 aa		27.74	■■■□□ 2.03
HUWE1-215	ENST00000622887	BRI3BP	Q8WY22	251 aa		27.74	■■■□□ 2.03
HUWE1-215	ENST00000622887	API5	Q9BZZ5	524 aa	Known RBP	27.74	■■■□□ 2.03
HUWE1-215	ENST00000622887	SIL1	Q9H173	461 aa		27.74	■■■□□ 2.03
HUWE1-215	ENST00000622887	SLC34A2	O95436	690 aa		27.73	■■■□□ 2.03
HUWE1-215	ENST00000622887	GTF2A2	P52657	109 aa		27.73	■■■□□ 2.03
HUWE1-215	ENST00000622887	CD99L2	Q8TCZ2	262 aa		27.73	■■■□□ 2.03
HUWE1-215	ENST00000622887	OTUD5	Q96G74	571 aa		27.73	■■■□□ 2.03
HUWE1-215	ENST00000622887	CEP126	Q9P2H0	1117 aa		27.73	■■■□□ 2.03
HUWE1-215	ENST00000622887	CCL15-CCL14	A0A0B4J2E2	113 aa		27.72	■■■□□ 2.03
HUWE1-215	ENST00000622887	SP3	Q02447	781 aa		27.72	■■■□□ 2.03
HUWE1-215	ENST00000622887	CCL15	Q16663	113 aa		27.72	■■■□□ 2.03
HUWE1-215	ENST00000622887	HOOK2	Q96ED9	719 aa		27.72	■■■□□ 2.03
HUWE1-215	ENST00000622887	HDAC5	Q9UQL6	1122 aa		27.72	■■■□□ 2.03
HUWE1-215	ENST00000622887	SPDYE5	A6NIY4	337 aa		27.71	■■■□□ 2.03
HUWE1-215	ENST00000622887	ATP2B3	Q16720	1220 aa		27.71	■■■□□ 2.03
HUWE1-215	ENST00000622887	LRRFIP2	Q9Y608	721 aa	Known RBP	27.71	■■■□□ 2.03
HUWE1-215	ENST00000622887	WRNIP1	Q96S55	665 aa		27.7	■■■□□ 2.02
HUWE1-215	ENST00000622887	PTPN22	Q9Y2R2	807 aa		27.7	■■■□□ 2.02
HUWE1-215	ENST00000622887	SNCAIP	Q9Y6H5	919 aa		27.7	■■■□□ 2.02
HUWE1-215	ENST00000622887	ERO1B	Q86YB8	467 aa		27.69	■■■□□ 2.02
HUWE1-215	ENST00000622887	EFCC1	Q9HA90	598 aa		27.69	■■■□□ 2.02
HUWE1-215	ENST00000622887	ZFYVE28	Q9HCC9	887 aa		27.69	■■■□□ 2.02
HUWE1-215	ENST00000622887	GNL3L	Q9NVN8	582 aa	Known RBP	27.69	■■■□□ 2.02
HUWE1-215	ENST00000622887	DAGLA	Q9Y4D2	1042 aa		27.69	■■■□□ 2.02
HUWE1-215	ENST00000622887	RPAP1	Q9BWH6	1393 aa	Predicted RBP	27.69	■■■□□ 2.02
HUWE1-215	ENST00000622887	IL15	P40933	162 aa	Predicted RBP	27.68	■■■□□ 2.02
HUWE1-215	ENST00000622887	TAF1C	Q15572	869 aa	Predicted RBP	27.68	■■■□□ 2.02
HUWE1-215	ENST00000622887	DCAF15	Q66K64	600 aa		27.68	■■■□□ 2.02
HUWE1-215	ENST00000622887	FAM43A	Q8N2R8	423 aa		27.68	■■■□□ 2.02
HUWE1-215	ENST00000622887	ZKSCAN4	Q969J2	545 aa	Predicted RBP	27.68	■■■□□ 2.02
HUWE1-215	ENST00000622887	PA2G4	Q9UQ80	394 aa	Known RBP	27.68	■■■□□ 2.02
HUWE1-215	ENST00000622887	PRDX5	P30044	214 aa		27.67	■■■□□ 2.02
HUWE1-215	ENST00000622887	CAP1	Q01518	475 aa		27.67	■■■□□ 2.02
HUWE1-215	ENST00000622887	DIXDC1	Q155Q3	683 aa		27.67	■■■□□ 2.02
HUWE1-215	ENST00000622887	FAM151A	Q8WW52	585 aa		27.67	■■■□□ 2.02
HUWE1-215	ENST00000622887	MEIS3	Q99687	375 aa		27.67	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms